RNA–Protein interactions for RNA: ENST00000580617.5

NCOR1-220, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 2

Gene NCOR1, Length 1,352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-220ENST00000580617 RFX5P48382 616 aaPredicted RBP13.07□□□□□ -0.32
NCOR1-220ENST00000580617 HNRNPUQ00839 825 aaKnown RBP eCLIP13.07□□□□□ -0.32
NCOR1-220ENST00000580617 MAP2K1Q02750 393 aaPredicted RBP13.07□□□□□ -0.32
NCOR1-220ENST00000580617 VGLL2Q8N8G2 317 aa13.07□□□□□ -0.32
NCOR1-220ENST00000580617 FAM84BQ96KN1 310 aaPredicted RBP13.07□□□□□ -0.32
NCOR1-220ENST00000580617 HDAC9Q9UKV0 1011 aa13.07□□□□□ -0.32
NCOR1-220ENST00000580617 KIF16BQ96L93 1317 aa13.07□□□□□ -0.32
NCOR1-220ENST00000580617 AKAP11Q9UKA4 1901 aa13.07□□□□□ -0.32
NCOR1-220ENST00000580617 UBTFL1P0CB47 393 aaPredicted RBP13.07□□□□□ -0.32
NCOR1-220ENST00000580617 MAP2K2P36507 400 aa13.07□□□□□ -0.32
NCOR1-220ENST00000580617 CTCFP49711 727 aaPredicted RBP13.07□□□□□ -0.32
NCOR1-220ENST00000580617 MMP14P50281 582 aa13.07□□□□□ -0.32
NCOR1-220ENST00000580617 METTL24Q5JXM2 366 aa13.07□□□□□ -0.32
NCOR1-220ENST00000580617 C2orf69Q8N8R5 385 aa13.07□□□□□ -0.32
NCOR1-220ENST00000580617 ZBED3Q96IU2 234 aaPredicted RBP13.07□□□□□ -0.32
NCOR1-220ENST00000580617 F8W031 263 aaPredicted RBP13.06□□□□□ -0.32
NCOR1-220ENST00000580617 PDE8BO95263 885 aa13.06□□□□□ -0.32
NCOR1-220ENST00000580617 HIBADHP31937 336 aaKnown RBP13.06□□□□□ -0.32
NCOR1-220ENST00000580617 FKBP1AP62942 108 aaKnown RBP13.06□□□□□ -0.32
NCOR1-220ENST00000580617 RGMBQ6NW40 437 aa13.06□□□□□ -0.32
NCOR1-220ENST00000580617 TNS4Q8IZW8 715 aa13.06□□□□□ -0.32
NCOR1-220ENST00000580617 TDRD7Q8NHU6 1098 aaKnown RBP13.06□□□□□ -0.32
NCOR1-220ENST00000580617 ARHGAP45Q92619 1136 aa13.06□□□□□ -0.32
NCOR1-220ENST00000580617 PCDHAC2Q9Y5I4 1007 aa13.06□□□□□ -0.32
NCOR1-220ENST00000580617 FAM205AQ6ZU69 1335 aa13.05□□□□□ -0.32
NCOR1-220ENST00000580617 FAM155AB1AL88 458 aaPredicted RBP13.05□□□□□ -0.32
NCOR1-220ENST00000580617 EYA2O00167 538 aa13.05□□□□□ -0.32
NCOR1-220ENST00000580617 CAPN15O75808 1086 aa13.05□□□□□ -0.32
NCOR1-220ENST00000580617 BCAR3O75815 825 aa13.05□□□□□ -0.32
NCOR1-220ENST00000580617 HSPA8P11142 646 aaKnown RBP13.05□□□□□ -0.32
NCOR1-220ENST00000580617 LBX1P52954 281 aa13.05□□□□□ -0.32
NCOR1-220ENST00000580617 PTPN12Q05209 780 aaKnown RBP13.05□□□□□ -0.32
NCOR1-220ENST00000580617 PRAMEF18Q5VWM3 479 aa13.05□□□□□ -0.32
NCOR1-220ENST00000580617 ZIC5Q96T25 663 aa13.05□□□□□ -0.32
NCOR1-220ENST00000580617 MEIS3Q99687 375 aa13.05□□□□□ -0.32
NCOR1-220ENST00000580617 LRRFIP2Q9Y608 721 aaKnown RBP13.05□□□□□ -0.32
NCOR1-220ENST00000580617 CASP8AP2Q9UKL3 1982 aa13.04□□□□□ -0.32
NCOR1-220ENST00000580617 DLGAP5Q15398 846 aa13.04□□□□□ -0.32
NCOR1-220ENST00000580617 MFSD14BQ5SR56 506 aa13.04□□□□□ -0.32
NCOR1-220ENST00000580617 INTS3Q68E01 1043 aaKnown RBP13.04□□□□□ -0.32
NCOR1-220ENST00000580617 FBXO33Q7Z6M2 555 aa13.04□□□□□ -0.32
NCOR1-220ENST00000580617 APOBEC3FQ8IUX4 373 aaKnown RBP13.04□□□□□ -0.32
NCOR1-220ENST00000580617 MTMR14Q8NCE2 650 aa13.04□□□□□ -0.32
NCOR1-220ENST00000580617 PRDM10Q9NQV6 1147 aa13.04□□□□□ -0.32
NCOR1-220ENST00000580617 IQSEC3Q9UPP2 1182 aaPredicted RBP13.04□□□□□ -0.32
NCOR1-220ENST00000580617 TNNQ9UQP3 1299 aa13.04□□□□□ -0.32
NCOR1-220ENST00000580617 TRIM27P14373 513 aa13.03□□□□□ -0.32
NCOR1-220ENST00000580617 FGFR2P21802 821 aa13.03□□□□□ -0.32
NCOR1-220ENST00000580617 ZNF157P51786 506 aaPredicted RBP13.03□□□□□ -0.32
NCOR1-220ENST00000580617 NOGQ13253 232 aa13.03□□□□□ -0.32
NCOR1-220ENST00000580617 PUM3Q15397 648 aaKnown RBP13.03□□□□□ -0.32
NCOR1-220ENST00000580617 CFAP100Q494V2 611 aa13.03□□□□□ -0.32
NCOR1-220ENST00000580617 MOB2Q70IA6 237 aa13.03□□□□□ -0.32
NCOR1-220ENST00000580617 ATG9AQ7Z3C6 839 aa13.03□□□□□ -0.32
NCOR1-220ENST00000580617 BEGAINQ9BUH8 593 aa13.03□□□□□ -0.32
NCOR1-220ENST00000580617 AOX1Q06278 1338 aa13.03□□□□□ -0.32
NCOR1-220ENST00000580617 COL1A1P02452 1464 aaPredicted RBP13.03□□□□□ -0.32
NCOR1-220ENST00000580617 SPDYE2BA6NHP3 402 aa13.02□□□□□ -0.33
NCOR1-220ENST00000580617 SPDYE6P0CI01 402 aa13.02□□□□□ -0.33
NCOR1-220ENST00000580617 FKBP1BP68106 108 aa13.02□□□□□ -0.33
NCOR1-220ENST00000580617 CAVIN4Q5BKX8 364 aa13.02□□□□□ -0.33
NCOR1-220ENST00000580617 ATF7IPQ6VMQ6 1270 aa13.02□□□□□ -0.33
NCOR1-220ENST00000580617 VPS37DQ86XT2 251 aa13.02□□□□□ -0.33
NCOR1-220ENST00000580617 FRAT1Q92837 279 aaPredicted RBP13.02□□□□□ -0.33
NCOR1-220ENST00000580617 CCDC102AQ96A19 550 aa13.02□□□□□ -0.33
NCOR1-220ENST00000580617 PRMT6Q96LA8 375 aaPredicted RBP13.02□□□□□ -0.33
NCOR1-220ENST00000580617 SIL1Q9H173 461 aa13.02□□□□□ -0.33
NCOR1-220ENST00000580617 TSKSQ9UJT2 592 aa13.02□□□□□ -0.33
NCOR1-220ENST00000580617 TTF2Q9UNY4 1162 aaKnown RBP13.02□□□□□ -0.33
NCOR1-220ENST00000580617 IPO8O15397 1037 aaKnown RBP13.01□□□□□ -0.33
NCOR1-220ENST00000580617 CIAO1O76071 339 aa13.01□□□□□ -0.33
NCOR1-220ENST00000580617 SLC10A3P09131 477 aa13.01□□□□□ -0.33
NCOR1-220ENST00000580617 BCAMP50895 628 aa13.01□□□□□ -0.33
NCOR1-220ENST00000580617 CHAF1AQ13111 956 aaPredicted RBP13.01□□□□□ -0.33
NCOR1-220ENST00000580617 GRIK5Q16478 980 aa13.01□□□□□ -0.33
NCOR1-220ENST00000580617 RASAL3Q86YV0 1011 aa13.01□□□□□ -0.33
NCOR1-220ENST00000580617 HDAC5Q9UQL6 1122 aa13.01□□□□□ -0.33
NCOR1-220ENST00000580617 OTOFQ9HC10 1997 aa13□□□□□ -0.33
NCOR1-220ENST00000580617 SSC5DA1L4H1 1573 aa13□□□□□ -0.33
NCOR1-220ENST00000580617 ZBED9Q6R2W3 1325 aa13□□□□□ -0.33
NCOR1-220ENST00000580617 CLRN2A0PK11 232 aa13□□□□□ -0.33
NCOR1-220ENST00000580617 UBE2Q2LH0YL09 131 aa13□□□□□ -0.33
NCOR1-220ENST00000580617 IFIT1P09914 478 aaKnown RBP13□□□□□ -0.33
NCOR1-220ENST00000580617 RBM5P52756 815 aaKnown RBP eCLIP13□□□□□ -0.33
NCOR1-220ENST00000580617 KIF23Q02241 960 aaPredicted RBP13□□□□□ -0.33
NCOR1-220ENST00000580617 TTLL12Q14166 644 aaPredicted RBP13□□□□□ -0.33
NCOR1-220ENST00000580617 CLUAP1Q96AJ1 413 aa13□□□□□ -0.33
NCOR1-220ENST00000580617 DEFB129Q9H1M3 183 aa13□□□□□ -0.33
NCOR1-220ENST00000580617 FBXO3Q9UK99 471 aa13□□□□□ -0.33
NCOR1-220ENST00000580617 PA2G4Q9UQ80 394 aaKnown RBP13□□□□□ -0.33
NCOR1-220ENST00000580617 LAMB1P07942 1786 aa13□□□□□ -0.33
NCOR1-220ENST00000580617 MYO1BO43795 1136 aa12.99□□□□□ -0.33
NCOR1-220ENST00000580617 FRAT2O75474 233 aaPredicted RBP12.99□□□□□ -0.33
NCOR1-220ENST00000580617 GNAI3P08754 354 aa12.99□□□□□ -0.33
NCOR1-220ENST00000580617 SLC5A1P13866 664 aa12.99□□□□□ -0.33
NCOR1-220ENST00000580617 NF2P35240 595 aa12.99□□□□□ -0.33
NCOR1-220ENST00000580617 LPIN2Q92539 896 aa12.99□□□□□ -0.33
NCOR1-220ENST00000580617 VEZTQ9HBM0 779 aa12.99□□□□□ -0.33
NCOR1-220ENST00000580617 COPRSQ9NQ92 184 aa12.99□□□□□ -0.33
NCOR1-220ENST00000580617 SERPINA10Q9UK55 444 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms