RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 EYA2O00167 538 aa25.1■■□□□ 1.61
SMG8-204ENST00000580498 WNT10BO00744 389 aa25.1■■□□□ 1.61
SMG8-204ENST00000580498 FKBP1BP68106 108 aa25.1■■□□□ 1.61
SMG8-204ENST00000580498 LRRC24Q50LG9 513 aa25.1■■□□□ 1.61
SMG8-204ENST00000580498 INTS3Q68E01 1043 aaKnown RBP25.1■■□□□ 1.61
SMG8-204ENST00000580498 ATF7IPQ6VMQ6 1270 aa25.1■■□□□ 1.61
SMG8-204ENST00000580498 SLC5A1P13866 664 aa25.09■■□□□ 1.61
SMG8-204ENST00000580498 GYG1P46976 350 aa25.09■■□□□ 1.61
SMG8-204ENST00000580498 NBPF9Q3BBW0 867 aa25.09■■□□□ 1.61
SMG8-204ENST00000580498 ZBED9Q6R2W3 1325 aa25.09■■□□□ 1.61
SMG8-204ENST00000580498 RBM5P52756 815 aaKnown RBP eCLIP25.08■■□□□ 1.61
SMG8-204ENST00000580498 NOGQ13253 232 aa25.08■■□□□ 1.61
SMG8-204ENST00000580498 ZKSCAN2Q63HK3 967 aa25.08■■□□□ 1.61
SMG8-204ENST00000580498 TDRD7Q8NHU6 1098 aaKnown RBP25.08■■□□□ 1.61
SMG8-204ENST00000580498 TBC1D22AQ8WUA7 517 aa25.08■■□□□ 1.61
SMG8-204ENST00000580498 CCDC102AQ96A19 550 aa25.08■■□□□ 1.61
SMG8-204ENST00000580498 WBP1LQ9NX94 342 aa25.08■■□□□ 1.61
SMG8-204ENST00000580498 LRRFIP2Q9Y608 721 aaKnown RBP25.08■■□□□ 1.61
SMG8-204ENST00000580498 ASTN2O75129 1339 aaPredicted RBP25.08■■□□□ 1.6
SMG8-204ENST00000580498 FAM205AQ6ZU69 1335 aa25.08■■□□□ 1.6
SMG8-204ENST00000580498 F8W031 263 aaPredicted RBP25.07■■□□□ 1.6
SMG8-204ENST00000580498 MFSD14BQ5SR56 506 aa25.07■■□□□ 1.6
SMG8-204ENST00000580498 RGMBQ6NW40 437 aa25.07■■□□□ 1.6
SMG8-204ENST00000580498 KLHDC4Q8TBB5 520 aa25.07■■□□□ 1.6
SMG8-204ENST00000580498 FAM84BQ96KN1 310 aaPredicted RBP25.07■■□□□ 1.6
SMG8-204ENST00000580498 CEP126Q9P2H0 1117 aa25.07■■□□□ 1.6
SMG8-204ENST00000580498 ZNF646O15015 1829 aaPredicted RBP25.07■■□□□ 1.6
SMG8-204ENST00000580498 CIAO1O76071 339 aa25.06■■□□□ 1.6
SMG8-204ENST00000580498 TTLL12Q14166 644 aaPredicted RBP25.06■■□□□ 1.6
SMG8-204ENST00000580498 FTSJ3Q8IY81 847 aaKnown RBP25.06■■□□□ 1.6
SMG8-204ENST00000580498 CA12O43570 354 aa25.05■■□□□ 1.6
SMG8-204ENST00000580498 TRIM27P14373 513 aa25.05■■□□□ 1.6
SMG8-204ENST00000580498 MTMR14Q8NCE2 650 aa25.05■■□□□ 1.6
SMG8-204ENST00000580498 LPIN2Q92539 896 aa25.05■■□□□ 1.6
SMG8-204ENST00000580498 MEIS3Q99687 375 aa25.05■■□□□ 1.6
SMG8-204ENST00000580498 FOXN1O15353 648 aa25.04■■□□□ 1.6
SMG8-204ENST00000580498 BCAR3O75815 825 aa25.04■■□□□ 1.6
SMG8-204ENST00000580498 ZNF157P51786 506 aaPredicted RBP25.04■■□□□ 1.6
SMG8-204ENST00000580498 PTPN12Q05209 780 aaKnown RBP25.04■■□□□ 1.6
SMG8-204ENST00000580498 IFFO2Q5TF58 517 aa25.04■■□□□ 1.6
SMG8-204ENST00000580498 SIL1Q9H173 461 aa25.04■■□□□ 1.6
SMG8-204ENST00000580498 GNL3LQ9NVN8 582 aaKnown RBP25.04■■□□□ 1.6
SMG8-204ENST00000580498 JAG2Q9Y219 1238 aa25.04■■□□□ 1.6
SMG8-204ENST00000580498 COL1A1P02452 1464 aaPredicted RBP25.03■■□□□ 1.6
SMG8-204ENST00000580498 IL15P40933 162 aaPredicted RBP25.03■■□□□ 1.6
SMG8-204ENST00000580498 CHAF1AQ13111 956 aaPredicted RBP25.03■■□□□ 1.6
SMG8-204ENST00000580498 CFAP100Q494V2 611 aa25.03■■□□□ 1.6
SMG8-204ENST00000580498 FBXO33Q7Z6M2 555 aa25.03■■□□□ 1.6
SMG8-204ENST00000580498 TNS4Q8IZW8 715 aa25.03■■□□□ 1.6
SMG8-204ENST00000580498 CERS5Q8N5B7 392 aa25.03■■□□□ 1.6
SMG8-204ENST00000580498 VGLL2Q8N8G2 317 aa25.03■■□□□ 1.6
SMG8-204ENST00000580498 PRDM10Q9NQV6 1147 aa25.03■■□□□ 1.6
SMG8-204ENST00000580498 TTF2Q9UNY4 1162 aaKnown RBP25.03■■□□□ 1.6
SMG8-204ENST00000580498 THSD7BQ9C0I4 1608 aa25.03■■□□□ 1.6
SMG8-204ENST00000580498 PAPPA2Q9BXP8 1791 aa25.03■■□□□ 1.6
SMG8-204ENST00000580498 GNAI2P04899 355 aa25.02■■□□□ 1.6
SMG8-204ENST00000580498 RFX5P48382 616 aaPredicted RBP25.02■■□□□ 1.6
SMG8-204ENST00000580498 CLUAP1Q96AJ1 413 aa25.02■■□□□ 1.6
SMG8-204ENST00000580498 PPP2R3BQ9Y5P8 575 aa25.02■■□□□ 1.6
SMG8-204ENST00000580498 MAST3O60307 1309 aa25.02■■□□□ 1.6
SMG8-204ENST00000580498 AOC2O75106 756 aa25.01■■□□□ 1.59
SMG8-204ENST00000580498 TNFAIP1Q13829 316 aa25.01■■□□□ 1.59
SMG8-204ENST00000580498 COL13A1Q5TAT6 717 aaPredicted RBP25.01■■□□□ 1.59
SMG8-204ENST00000580498 DLK2Q6UY11 383 aa25.01■■□□□ 1.59
SMG8-204ENST00000580498 ARMC9Q7Z3E5 817 aa25.01■■□□□ 1.59
SMG8-204ENST00000580498 SERPINA10Q9UK55 444 aa25.01■■□□□ 1.59
SMG8-204ENST00000580498 SRGAP3O43295 1099 aa25■■□□□ 1.59
SMG8-204ENST00000580498 ATP2B3Q16720 1220 aa25■■□□□ 1.59
SMG8-204ENST00000580498 ECM29Q5VYK3 1845 aa25■■□□□ 1.59
SMG8-204ENST00000580498 SPDYE2BA6NHP3 402 aa24.99■■□□□ 1.59
SMG8-204ENST00000580498 SPDYE6P0CI01 402 aa24.99■■□□□ 1.59
SMG8-204ENST00000580498 REM2Q8IYK8 340 aaPredicted RBP24.99■■□□□ 1.59
SMG8-204ENST00000580498 ARAP2Q8WZ64 1704 aa24.99■■□□□ 1.59
SMG8-204ENST00000580498 ZBED3Q96IU2 234 aaPredicted RBP24.99■■□□□ 1.59
SMG8-204ENST00000580498 VEZTQ9HBM0 779 aa24.99■■□□□ 1.59
SMG8-204ENST00000580498 COPRSQ9NQ92 184 aa24.99■■□□□ 1.59
SMG8-204ENST00000580498 IQSEC3Q9UPP2 1182 aaPredicted RBP24.99■■□□□ 1.59
SMG8-204ENST00000580498 SUGT1Q9Y2Z0 365 aa24.99■■□□□ 1.59
SMG8-204ENST00000580498 FGFR2P21802 821 aa24.98■■□□□ 1.59
SMG8-204ENST00000580498 BCAMP50895 628 aa24.98■■□□□ 1.59
SMG8-204ENST00000580498 WDR66Q8TBY9 1149 aa24.98■■□□□ 1.59
SMG8-204ENST00000580498 AKAP2Q9Y2D5 859 aa24.98■■□□□ 1.59
SMG8-204ENST00000580498 PCNTO95613 3336 aa24.97■■□□□ 1.59
SMG8-204ENST00000580498 MS4A1P11836 297 aa24.97■■□□□ 1.59
SMG8-204ENST00000580498 LBX1P52954 281 aa24.97■■□□□ 1.59
SMG8-204ENST00000580498 SUPT20HL1Q3ZLR7 823 aa24.97■■□□□ 1.59
SMG8-204ENST00000580498 ATG9AQ7Z3C6 839 aa24.97■■□□□ 1.59
SMG8-204ENST00000580498 DEFB129Q9H1M3 183 aa24.97■■□□□ 1.59
SMG8-204ENST00000580498 MYH13Q9UKX3 1938 aa24.96■■□□□ 1.59
SMG8-204ENST00000580498 PPP1R12BO60237 982 aaPredicted RBP24.96■■□□□ 1.59
SMG8-204ENST00000580498 TNNI2P48788 182 aa24.96■■□□□ 1.59
SMG8-204ENST00000580498 HDLBPQ00341 1268 aaKnown RBP24.96■■□□□ 1.59
SMG8-204ENST00000580498 TEKT1Q969V4 418 aa24.96■■□□□ 1.59
SMG8-204ENST00000580498 TMOD2Q9NZR1 351 aa24.96■■□□□ 1.59
SMG8-204ENST00000580498 SCAF8Q9UPN6 1271 aaKnown RBP24.96■■□□□ 1.59
SMG8-204ENST00000580498 CLRN2A0PK11 232 aa24.95■■□□□ 1.58
SMG8-204ENST00000580498 SLC10A3P09131 477 aa24.95■■□□□ 1.58
SMG8-204ENST00000580498 MTX1Q13505 466 aa24.95■■□□□ 1.58
SMG8-204ENST00000580498 DZIP1LQ8IYY4 767 aaKnown RBP24.95■■□□□ 1.58
SMG8-204ENST00000580498 HSPA8P11142 646 aaKnown RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms