RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.29□□□□□ -1.08
CCDC178-209ENST00000579947 MAP3K15Q6ZN16 1313 aa8.29□□□□□ -1.08
CCDC178-209ENST00000579947 PRKCZQ05513 592 aa8.29□□□□□ -1.08
CCDC178-209ENST00000579947 PPP1R42Q7Z4L9 355 aa8.29□□□□□ -1.08
CCDC178-209ENST00000579947 C6orf229H3BNL8 230 aa8.28□□□□□ -1.08
CCDC178-209ENST00000579947 FMNL1O95466 1100 aaPredicted RBP8.28□□□□□ -1.08
CCDC178-209ENST00000579947 ADCY3O60266 1144 aa8.28□□□□□ -1.08
CCDC178-209ENST00000579947 GPSM2P81274 684 aa8.28□□□□□ -1.08
CCDC178-209ENST00000579947 LBHD1Q9BQE6 289 aaPredicted RBP8.28□□□□□ -1.08
CCDC178-209ENST00000579947 PRR33A8MZF0 331 aa8.27□□□□□ -1.09
CCDC178-209ENST00000579947 USP2O75604 605 aaPredicted RBP8.27□□□□□ -1.09
CCDC178-209ENST00000579947 GRIN2CQ14957 1233 aa8.27□□□□□ -1.09
CCDC178-209ENST00000579947 PARP10Q53GL7 1025 aa8.27□□□□□ -1.09
CCDC178-209ENST00000579947 TBC1D16Q8TBP0 767 aa8.27□□□□□ -1.09
CCDC178-209ENST00000579947 ZBED3Q96IU2 234 aaPredicted RBP8.27□□□□□ -1.09
CCDC178-209ENST00000579947 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.27□□□□□ -1.09
CCDC178-209ENST00000579947 CXXC1Q9P0U4 656 aaPredicted RBP8.27□□□□□ -1.09
CCDC178-209ENST00000579947 NSFL1CQ9UNZ2 370 aaKnown RBP8.27□□□□□ -1.09
CCDC178-209ENST00000579947 TEFQ10587 303 aa8.27□□□□□ -1.09
CCDC178-209ENST00000579947 MTHFSDQ2M296 383 aaKnown RBP8.27□□□□□ -1.09
CCDC178-209ENST00000579947 MUC6Q6W4X9 2439 aa8.27□□□□□ -1.09
CCDC178-209ENST00000579947 SNRPA1P09661 255 aaKnown RBP8.26□□□□□ -1.09
CCDC178-209ENST00000579947 GPTP24298 496 aa8.26□□□□□ -1.09
CCDC178-209ENST00000579947 IRF5Q13568 498 aa8.26□□□□□ -1.09
CCDC178-209ENST00000579947 SUPT20HL1Q3ZLR7 823 aa8.26□□□□□ -1.09
CCDC178-209ENST00000579947 ELP3Q9H9T3 547 aa8.26□□□□□ -1.09
CCDC178-209ENST00000579947 PFASO15067 1338 aa8.26□□□□□ -1.09
CCDC178-209ENST00000579947 LAMA2P24043 3122 aaKnown RBP8.26□□□□□ -1.09
CCDC178-209ENST00000579947 USP17L3A6NCW0 530 aa8.26□□□□□ -1.09
CCDC178-209ENST00000579947 USP17L4A6NCW7 530 aa8.26□□□□□ -1.09
CCDC178-209ENST00000579947 FAM86C2PA6NEL3 165 aa8.26□□□□□ -1.09
CCDC178-209ENST00000579947 FCGRTP55899 365 aa8.26□□□□□ -1.09
CCDC178-209ENST00000579947 USP17L1Q7RTZ2 530 aa8.26□□□□□ -1.09
CCDC178-209ENST00000579947 ZC3H12CQ9C0D7 883 aaKnown RBP8.26□□□□□ -1.09
CCDC178-209ENST00000579947 DEFB129Q9H1M3 183 aa8.26□□□□□ -1.09
CCDC178-209ENST00000579947 PI4K2BG5E9Z4 385 aa8.26□□□□□ -1.09
CCDC178-209ENST00000579947 SASH1O94885 1247 aa8.26□□□□□ -1.09
CCDC178-209ENST00000579947 SHHQ15465 462 aa8.26□□□□□ -1.09
CCDC178-209ENST00000579947 MTMR14Q8NCE2 650 aa8.26□□□□□ -1.09
CCDC178-209ENST00000579947 GABRQQ9UN88 632 aa8.26□□□□□ -1.09
CCDC178-209ENST00000579947 ZNF804BA4D1E1 1349 aa8.25□□□□□ -1.09
CCDC178-209ENST00000579947 CETPP11597 493 aa8.25□□□□□ -1.09
CCDC178-209ENST00000579947 COL6A1P12109 1028 aa8.25□□□□□ -1.09
CCDC178-209ENST00000579947 ERMP1Q7Z2K6 904 aa8.25□□□□□ -1.09
CCDC178-209ENST00000579947 MYO3BQ8WXR4 1341 aa8.25□□□□□ -1.09
CCDC178-209ENST00000579947 EYSQ5T1H1 3165 aa8.25□□□□□ -1.09
CCDC178-209ENST00000579947 BTBD19C9JJ37 291 aa8.25□□□□□ -1.09
CCDC178-209ENST00000579947 G3V3G9 751 aa8.25□□□□□ -1.09
CCDC178-209ENST00000579947 KCNQ3O43525 872 aa8.25□□□□□ -1.09
CCDC178-209ENST00000579947 IL13P35225 146 aa8.25□□□□□ -1.09
CCDC178-209ENST00000579947 DCAF8Q5TAQ9 597 aa8.25□□□□□ -1.09
CCDC178-209ENST00000579947 POTEEQ6S8J3 1075 aa8.25□□□□□ -1.09
CCDC178-209ENST00000579947 UTP14AQ9BVJ6 771 aaKnown RBP8.25□□□□□ -1.09
CCDC178-209ENST00000579947 PODXL2Q9NZ53 605 aa8.25□□□□□ -1.09
CCDC178-209ENST00000579947 OGDHLQ9ULD0 1010 aa8.25□□□□□ -1.09
CCDC178-209ENST00000579947 LRRC37A2A6NM11 1700 aa8.24□□□□□ -1.09
CCDC178-209ENST00000579947 BDP1A6H8Y1 2624 aa8.24□□□□□ -1.09
CCDC178-209ENST00000579947 KIF6Q6ZMV9 814 aa8.24□□□□□ -1.09
CCDC178-209ENST00000579947 OGFOD1Q8N543 542 aa8.24□□□□□ -1.09
CCDC178-209ENST00000579947 IL17REQ8NFR9 667 aa8.24□□□□□ -1.09
CCDC178-209ENST00000579947 FBXL18Q96ME1 805 aa8.24□□□□□ -1.09
CCDC178-209ENST00000579947 CPA4Q9UI42 421 aa8.24□□□□□ -1.09
CCDC178-209ENST00000579947 TCF20Q9UGU0 1960 aaKnown RBP8.24□□□□□ -1.09
CCDC178-209ENST00000579947 KRT37O76014 449 aa8.24□□□□□ -1.09
CCDC178-209ENST00000579947 ELNP15502 786 aa8.24□□□□□ -1.09
CCDC178-209ENST00000579947 ITGB8P26012 769 aa8.24□□□□□ -1.09
CCDC178-209ENST00000579947 GAS2L1Q99501 681 aaPredicted RBP8.24□□□□□ -1.09
CCDC178-209ENST00000579947 LRRC26Q2I0M4 334 aa8.23□□□□□ -1.09
CCDC178-209ENST00000579947 AAK1Q2M2I8 961 aa8.23□□□□□ -1.09
CCDC178-209ENST00000579947 TSPYL2Q9H2G4 693 aaPredicted RBP8.23□□□□□ -1.09
CCDC178-209ENST00000579947 CEMIPQ8WUJ3 1361 aa8.23□□□□□ -1.09
CCDC178-209ENST00000579947 C9orf50Q5SZB4 431 aa8.23□□□□□ -1.09
CCDC178-209ENST00000579947 PPM1EQ8WY54 764 aa8.23□□□□□ -1.09
CCDC178-209ENST00000579947 PODNQ7Z5L7 613 aa8.23□□□□□ -1.09
CCDC178-209ENST00000579947 BTBD11A6QL63 1104 aa8.22□□□□□ -1.09
CCDC178-209ENST00000579947 DACT2Q5SW24 774 aa8.22□□□□□ -1.09
CCDC178-209ENST00000579947 GIGYF2Q6Y7W6 1299 aaKnown RBP8.22□□□□□ -1.09
CCDC178-209ENST00000579947 ANKRD23Q86SG2 305 aa8.22□□□□□ -1.09
CCDC178-209ENST00000579947 FLT3LGP49771 235 aa8.21□□□□□ -1.09
CCDC178-209ENST00000579947 NBPF12Q5TAG4 269 aaPredicted RBP8.21□□□□□ -1.09
CCDC178-209ENST00000579947 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.21□□□□□ -1.09
CCDC178-209ENST00000579947 SPDYE5A6NIY4 337 aa8.21□□□□□ -1.1
CCDC178-209ENST00000579947 BCRP11274 1271 aa8.21□□□□□ -1.1
CCDC178-209ENST00000579947 PDE3AQ14432 1141 aa8.21□□□□□ -1.1
CCDC178-209ENST00000579947 TTLL7Q6ZT98 887 aa8.21□□□□□ -1.1
CCDC178-209ENST00000579947 ZBTB38Q8NAP3 1195 aaPredicted RBP8.21□□□□□ -1.1
CCDC178-209ENST00000579947 KHSRPQ92945 711 aaKnown RBP eCLIP8.21□□□□□ -1.1
CCDC178-209ENST00000579947 SNAPC2Q13487 334 aa8.2□□□□□ -1.1
CCDC178-209ENST00000579947 CELF1Q92879 486 aaKnown RBP8.2□□□□□ -1.1
CCDC178-209ENST00000579947 ZNF576Q9H609 170 aa8.2□□□□□ -1.1
CCDC178-209ENST00000579947 ARAP2Q8WZ64 1704 aa8.2□□□□□ -1.1
CCDC178-209ENST00000579947 GNAT3A8MTJ3 354 aa8.2□□□□□ -1.1
CCDC178-209ENST00000579947 UFL1O94874 794 aa8.2□□□□□ -1.1
CCDC178-209ENST00000579947 U2AF1L5P0DN76 240 aaPredicted RBP8.19□□□□□ -1.1
CCDC178-209ENST00000579947 HCLS1P14317 486 aaPredicted RBP8.19□□□□□ -1.1
CCDC178-209ENST00000579947 U2AF1Q01081 240 aaKnown RBP eCLIP8.19□□□□□ -1.1
CCDC178-209ENST00000579947 VGLL4Q14135 290 aa8.19□□□□□ -1.1
CCDC178-209ENST00000579947 ZBTB3Q9H5J0 574 aa8.19□□□□□ -1.1
CCDC178-209ENST00000579947 IGSF5Q9NSI5 407 aa8.19□□□□□ -1.1
CCDC178-209ENST00000579947 GGA1Q9UJY5 639 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms