RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 FPGT-TNNI3KV9GXZ4 949 aa14.18□□□□□ -0.14
ERBB2-208ENST00000578630 FAM205AQ6ZU69 1335 aa14.17□□□□□ -0.14
ERBB2-208ENST00000578630 APBB1O00213 710 aa14.17□□□□□ -0.14
ERBB2-208ENST00000578630 SEMA3EO15041 775 aa14.17□□□□□ -0.14
ERBB2-208ENST00000578630 CHAF1AQ13111 956 aaPredicted RBP14.17□□□□□ -0.14
ERBB2-208ENST00000578630 CCDC102BQ68D86 513 aa14.17□□□□□ -0.14
ERBB2-208ENST00000578630 MICALL2Q8IY33 904 aa14.17□□□□□ -0.14
ERBB2-208ENST00000578630 WDR66Q8TBY9 1149 aa14.17□□□□□ -0.14
ERBB2-208ENST00000578630 DENND2AQ9ULE3 1009 aa14.17□□□□□ -0.14
ERBB2-208ENST00000578630 IQSEC3Q9UPP2 1182 aaPredicted RBP14.17□□□□□ -0.14
ERBB2-208ENST00000578630 TIAM2Q8IVF5 1701 aa14.16□□□□□ -0.14
ERBB2-208ENST00000578630 ZBTB22O15209 634 aa14.16□□□□□ -0.14
ERBB2-208ENST00000578630 UQCRFS1P1P0C7P4 283 aa14.16□□□□□ -0.14
ERBB2-208ENST00000578630 ADORA1P30542 326 aa14.16□□□□□ -0.14
ERBB2-208ENST00000578630 MFSD14BQ5SR56 506 aa14.16□□□□□ -0.14
ERBB2-208ENST00000578630 RBM26Q5T8P6 1007 aaKnown RBP14.16□□□□□ -0.14
ERBB2-208ENST00000578630 RBM46Q8TBY0 533 aaKnown RBP14.16□□□□□ -0.14
ERBB2-208ENST00000578630 GMLQ99445 158 aa14.16□□□□□ -0.14
ERBB2-208ENST00000578630 LRRCC1Q9C099 1032 aa14.16□□□□□ -0.14
ERBB2-208ENST00000578630 RWDD1Q9H446 243 aaPredicted RBP14.16□□□□□ -0.14
ERBB2-208ENST00000578630 ZBTB47Q9UFB7 747 aaPredicted RBP14.16□□□□□ -0.14
ERBB2-208ENST00000578630 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.16□□□□□ -0.14
ERBB2-208ENST00000578630 IFIT2P09913 472 aaKnown RBP14.15□□□□□ -0.14
ERBB2-208ENST00000578630 PHKA1P46020 1223 aa14.15□□□□□ -0.14
ERBB2-208ENST00000578630 ZNF280AP59817 542 aaPredicted RBP14.15□□□□□ -0.14
ERBB2-208ENST00000578630 TTC39AQ5SRH9 613 aa14.15□□□□□ -0.14
ERBB2-208ENST00000578630 AACSQ86V21 672 aa14.15□□□□□ -0.14
ERBB2-208ENST00000578630 LDHDQ86WU2 507 aa14.15□□□□□ -0.14
ERBB2-208ENST00000578630 KIAA0825Q8IV33 1275 aa14.15□□□□□ -0.14
ERBB2-208ENST00000578630 SMC1BQ8NDV3 1235 aa14.15□□□□□ -0.14
ERBB2-208ENST00000578630 EAF2Q96CJ1 260 aaPredicted RBP14.15□□□□□ -0.14
ERBB2-208ENST00000578630 MXD3Q9BW11 206 aa14.15□□□□□ -0.14
ERBB2-208ENST00000578630 CCDC8Q9H0W5 538 aaPredicted RBP14.15□□□□□ -0.14
ERBB2-208ENST00000578630 IL1RAPL2Q9NP60 686 aa14.15□□□□□ -0.14
ERBB2-208ENST00000578630 JAG2Q9Y219 1238 aa14.15□□□□□ -0.14
ERBB2-208ENST00000578630 WDR90Q96KV7 1748 aa14.15□□□□□ -0.14
ERBB2-208ENST00000578630 IRX6P78412 446 aaPredicted RBP14.14□□□□□ -0.15
ERBB2-208ENST00000578630 FSTL1Q12841 308 aa14.14□□□□□ -0.15
ERBB2-208ENST00000578630 HDAC1Q13547 482 aaPredicted RBP14.14□□□□□ -0.15
ERBB2-208ENST00000578630 SAMD7Q7Z3H4 446 aa14.14□□□□□ -0.15
ERBB2-208ENST00000578630 ZGPATQ8N5A5 531 aaKnown RBP14.14□□□□□ -0.15
ERBB2-208ENST00000578630 ZC3H15Q8WU90 426 aaKnown RBP14.14□□□□□ -0.15
ERBB2-208ENST00000578630 DBNDD2Q9BQY9 259 aa14.14□□□□□ -0.15
ERBB2-208ENST00000578630 BCL11AQ9H165 835 aa14.14□□□□□ -0.15
ERBB2-208ENST00000578630 SUGT1Q9Y2Z0 365 aa14.14□□□□□ -0.15
ERBB2-208ENST00000578630 F8W031 263 aaPredicted RBP14.13□□□□□ -0.15
ERBB2-208ENST00000578630 TBC1D10BQ4KMP7 808 aaPredicted RBP14.13□□□□□ -0.15
ERBB2-208ENST00000578630 CHADLQ6NUI6 762 aa14.13□□□□□ -0.15
ERBB2-208ENST00000578630 GCC1Q96CN9 775 aa14.13□□□□□ -0.15
ERBB2-208ENST00000578630 MYOZ2Q9NPC6 264 aa14.13□□□□□ -0.15
ERBB2-208ENST00000578630 KIF4BQ2VIQ3 1234 aa14.12□□□□□ -0.15
ERBB2-208ENST00000578630 SPTY2D1Q68D10 685 aaPredicted RBP14.12□□□□□ -0.15
ERBB2-208ENST00000578630 CERS5Q8N5B7 392 aa14.12□□□□□ -0.15
ERBB2-208ENST00000578630 ZNF512BQ96KM6 892 aaPredicted RBP14.12□□□□□ -0.15
ERBB2-208ENST00000578630 MRIQ9BWK5 157 aa14.12□□□□□ -0.15
ERBB2-208ENST00000578630 TTF2Q9UNY4 1162 aaKnown RBP14.12□□□□□ -0.15
ERBB2-208ENST00000578630 SCN4AP35499 1836 aa14.12□□□□□ -0.15
ERBB2-208ENST00000578630 ZNF609O15014 1411 aa14.12□□□□□ -0.15
ERBB2-208ENST00000578630 SHTN1A0MZ66 631 aa14.11□□□□□ -0.15
ERBB2-208ENST00000578630 ARID4AP29374 1257 aaPredicted RBP14.11□□□□□ -0.15
ERBB2-208ENST00000578630 RBM5P52756 815 aaKnown RBP eCLIP14.11□□□□□ -0.15
ERBB2-208ENST00000578630 HIRAP54198 1017 aaPredicted RBP14.11□□□□□ -0.15
ERBB2-208ENST00000578630 C1QTNF8P60827 252 aa14.11□□□□□ -0.15
ERBB2-208ENST00000578630 DLGAP5Q15398 846 aa14.11□□□□□ -0.15
ERBB2-208ENST00000578630 SPATA5Q8NB90 893 aa14.11□□□□□ -0.15
ERBB2-208ENST00000578630 PGAP2Q9UHJ9 254 aa14.11□□□□□ -0.15
ERBB2-208ENST00000578630 DBNLQ9UJU6 430 aaKnown RBP14.11□□□□□ -0.15
ERBB2-208ENST00000578630 MAST3O60307 1309 aa14.11□□□□□ -0.15
ERBB2-208ENST00000578630 PDS5AQ29RF7 1337 aaKnown RBP14.11□□□□□ -0.15
ERBB2-208ENST00000578630 SCN9AQ15858 1988 aa14.11□□□□□ -0.15
ERBB2-208ENST00000578630 MYO1BO43795 1136 aa14.1□□□□□ -0.15
ERBB2-208ENST00000578630 LDHBP07195 334 aaKnown RBP14.1□□□□□ -0.15
ERBB2-208ENST00000578630 POTEIP0CG38 1075 aa14.1□□□□□ -0.15
ERBB2-208ENST00000578630 POTEJP0CG39 1038 aa14.1□□□□□ -0.15
ERBB2-208ENST00000578630 HDLBPQ00341 1268 aaKnown RBP14.1□□□□□ -0.15
ERBB2-208ENST00000578630 RASGRF1Q13972 1273 aa14.1□□□□□ -0.15
ERBB2-208ENST00000578630 SCARF1Q14162 830 aa14.1□□□□□ -0.15
ERBB2-208ENST00000578630 CNTROBQ8N137 903 aa14.1□□□□□ -0.15
ERBB2-208ENST00000578630 TRPM4Q8TD43 1214 aa14.1□□□□□ -0.15
ERBB2-208ENST00000578630 DCPSQ96C86 337 aaKnown RBP14.1□□□□□ -0.15
ERBB2-208ENST00000578630 HMG20BQ9P0W2 317 aa14.1□□□□□ -0.15
ERBB2-208ENST00000578630 ABCF2Q9UG63 623 aa14.1□□□□□ -0.15
ERBB2-208ENST00000578630 SALL1Q9NSC2 1324 aa14.1□□□□□ -0.15
ERBB2-208ENST00000578630 A0A1B0GUL6 1792 aa14.09□□□□□ -0.15
ERBB2-208ENST00000578630 SMARCA5O60264 1052 aaPredicted RBP14.09□□□□□ -0.15
ERBB2-208ENST00000578630 NEFLP07196 543 aa14.09□□□□□ -0.15
ERBB2-208ENST00000578630 CFAP100Q494V2 611 aa14.09□□□□□ -0.15
ERBB2-208ENST00000578630 ANKRD45Q5TZF3 282 aa14.09□□□□□ -0.15
ERBB2-208ENST00000578630 MAP1SQ66K74 1059 aaPredicted RBP14.09□□□□□ -0.15
ERBB2-208ENST00000578630 ERICH6Q7L0X2 663 aa14.09□□□□□ -0.15
ERBB2-208ENST00000578630 CDC37L1Q7L3B6 337 aa14.09□□□□□ -0.15
ERBB2-208ENST00000578630 SLF2Q8IX21 1173 aa14.09□□□□□ -0.15
ERBB2-208ENST00000578630 MTMR14Q8NCE2 650 aa14.09□□□□□ -0.15
ERBB2-208ENST00000578630 SERPINA10Q9UK55 444 aa14.09□□□□□ -0.15
ERBB2-208ENST00000578630 WNT10BO00744 389 aa14.08□□□□□ -0.16
ERBB2-208ENST00000578630 IGSF3O75054 1194 aa14.08□□□□□ -0.16
ERBB2-208ENST00000578630 MCAMP43121 646 aa14.08□□□□□ -0.16
ERBB2-208ENST00000578630 TEKT1Q969V4 418 aa14.08□□□□□ -0.16
ERBB2-208ENST00000578630 GPATCH3Q96I76 525 aa14.08□□□□□ -0.16
ERBB2-208ENST00000578630 TLR7Q9NYK1 1049 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms