RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	STK31	Q9BXU1	1019 aa		5.7	□□□□□ -1.5
PPP4R1-209	ENST00000578329	USP44	Q9H0E7	712 aa		5.7	□□□□□ -1.5
PPP4R1-209	ENST00000578329	TMX4	Q9H1E5	349 aa	Predicted RBP	5.7	□□□□□ -1.5
PPP4R1-209	ENST00000578329	ARAP2	Q8WZ64	1704 aa		5.7	□□□□□ -1.5
PPP4R1-209	ENST00000578329	FAM205A	Q6ZU69	1335 aa		5.7	□□□□□ -1.5
PPP4R1-209	ENST00000578329	AKAP11	Q9UKA4	1901 aa		5.7	□□□□□ -1.5
PPP4R1-209	ENST00000578329	ZSWIM8	A7E2V4	1837 aa		5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	PDE4DIP	Q5VU43	2346 aa		5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	SPDYE2B	A6NHP3	402 aa		5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	IGF2BP3	O00425	579 aa	Known RBP eCLIP	5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	SPDYE6	P0CI01	402 aa		5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	FGFR2	P21802	821 aa		5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	GYG1	P46976	350 aa		5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	TM4SF4	P48230	202 aa		5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	SLFN5	Q08AF3	891 aa		5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	MAP3K11	Q16584	847 aa		5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	NBPF12	Q5TAG4	269 aa	Predicted RBP	5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	ATG9A	Q7Z3C6	839 aa		5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	FBXO33	Q7Z6M2	555 aa		5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	SULF1	Q8IWU6	871 aa		5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	FAM9B	Q8IZU0	186 aa		5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	C2orf69	Q8N8R5	385 aa		5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	CNKSR2	Q8WXI2	1034 aa		5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	PTPN18	Q99952	460 aa		5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	BICC1	Q9H694	974 aa	Known RBP	5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	SAGE1	Q9NXZ1	904 aa		5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	TNN	Q9UQP3	1299 aa		5.69	□□□□□ -1.5
PPP4R1-209	ENST00000578329	MKI67	P46013	3256 aa	Known RBP	5.68	□□□□□ -1.5
PPP4R1-209	ENST00000578329	CLRN2	A0PK11	232 aa		5.68	□□□□□ -1.5
PPP4R1-209	ENST00000578329	ANKRD18B	A2A2Z9	1011 aa		5.68	□□□□□ -1.5
PPP4R1-209	ENST00000578329	CA12	O43570	354 aa		5.68	□□□□□ -1.5
PPP4R1-209	ENST00000578329	USP2	O75604	605 aa	Predicted RBP	5.68	□□□□□ -1.5
PPP4R1-209	ENST00000578329	ALDH1L1	O75891	902 aa		5.68	□□□□□ -1.5
PPP4R1-209	ENST00000578329	TBC1D8	O95759	1140 aa		5.68	□□□□□ -1.5
PPP4R1-209	ENST00000578329	IGHMBP2	P38935	993 aa	Known RBP	5.68	□□□□□ -1.5
PPP4R1-209	ENST00000578329	FKBP1B	P68106	108 aa		5.68	□□□□□ -1.5
PPP4R1-209	ENST00000578329	NEXN	Q0ZGT2	675 aa		5.68	□□□□□ -1.5
PPP4R1-209	ENST00000578329	MKRN3	Q13064	507 aa	Known RBP	5.68	□□□□□ -1.5
PPP4R1-209	ENST00000578329	DGKZ	Q13574	1117 aa		5.68	□□□□□ -1.5
PPP4R1-209	ENST00000578329	PRKG1	Q13976	671 aa		5.68	□□□□□ -1.5
PPP4R1-209	ENST00000578329	SPRYD7	Q5W111	196 aa		5.68	□□□□□ -1.5
PPP4R1-209	ENST00000578329	ZNF296	Q8WUU4	475 aa	Predicted RBP	5.68	□□□□□ -1.5
PPP4R1-209	ENST00000578329	CCDC102A	Q96A19	550 aa		5.68	□□□□□ -1.5
PPP4R1-209	ENST00000578329	CFHR5	Q9BXR6	569 aa		5.68	□□□□□ -1.5
PPP4R1-209	ENST00000578329	ANKRD2	Q9GZV1	360 aa		5.68	□□□□□ -1.5
PPP4R1-209	ENST00000578329	DEFB129	Q9H1M3	183 aa		5.68	□□□□□ -1.5
PPP4R1-209	ENST00000578329	CCDC85C	A6NKD9	419 aa		5.67	□□□□□ -1.5
PPP4R1-209	ENST00000578329		F8W031	263 aa	Predicted RBP	5.67	□□□□□ -1.5
PPP4R1-209	ENST00000578329	SLURP2	P0DP57	97 aa		5.67	□□□□□ -1.5
PPP4R1-209	ENST00000578329	HSP90B1	P14625	803 aa	Known RBP	5.67	□□□□□ -1.5
PPP4R1-209	ENST00000578329	FKBP1A	P62942	108 aa	Known RBP	5.67	□□□□□ -1.5
PPP4R1-209	ENST00000578329	IFIT5	Q13325	482 aa	Known RBP	5.67	□□□□□ -1.5
PPP4R1-209	ENST00000578329	CFAP100	Q494V2	611 aa		5.67	□□□□□ -1.5
PPP4R1-209	ENST00000578329	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	5.67	□□□□□ -1.5
PPP4R1-209	ENST00000578329	ZNF384	Q8TF68	577 aa		5.67	□□□□□ -1.5
PPP4R1-209	ENST00000578329	MS4A4A	Q96JQ5	239 aa		5.67	□□□□□ -1.5
PPP4R1-209	ENST00000578329	MPHOSPH8	Q99549	860 aa		5.67	□□□□□ -1.5
PPP4R1-209	ENST00000578329	MYH16	Q9H6N6	1097 aa		5.67	□□□□□ -1.5
PPP4R1-209	ENST00000578329	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	5.67	□□□□□ -1.5
PPP4R1-209	ENST00000578329	CENPF	P49454	3210 aa		5.67	□□□□□ -1.5
PPP4R1-209	ENST00000578329	MYO3B	Q8WXR4	1341 aa		5.67	□□□□□ -1.5
PPP4R1-209	ENST00000578329	BRCA2	P51587	3418 aa		5.67	□□□□□ -1.5
PPP4R1-209	ENST00000578329	TESPA1	A2RU30	521 aa	Predicted RBP	5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	GPR25	O00155	361 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	ANP32C	O43423	234 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	PLIN1	O60240	522 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	SLC34A2	O95436	690 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	BCAM	P50895	628 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	CACNB3	P54284	484 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	SOX10	P56693	466 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	MOGS	Q13724	837 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	UBE4A	Q14139	1066 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	RASA3	Q14644	834 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	SPDYE2	Q495Y8	402 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	APOBEC3H	Q6NTF7	200 aa	Known RBP	5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	SLC4A10	Q6U841	1118 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	LDHAL6A	Q6ZMR3	332 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	FBXW7	Q969H0	707 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	WNK4	Q96J92	1243 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	SRCIN1	Q9C0H9	1055 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	TMEM39B	Q9GZU3	492 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	TDRD3	Q9H7E2	651 aa	Known RBP	5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	ZNF70	Q9UC06	446 aa	Predicted RBP	5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	ANGEL1	Q9UNK9	670 aa	Known RBP	5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	HPS5	Q9UPZ3	1129 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	RFX7	Q2KHR2	1363 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329	ATRNL1	Q5VV63	1379 aa		5.66	□□□□□ -1.5
PPP4R1-209	ENST00000578329		G3V3G9	751 aa		5.65	□□□□□ -1.5
PPP4R1-209	ENST00000578329	PDE8B	O95263	885 aa		5.65	□□□□□ -1.5
PPP4R1-209	ENST00000578329	CTGF	P29279	349 aa		5.65	□□□□□ -1.5
PPP4R1-209	ENST00000578329	DLGAP5	Q15398	846 aa		5.65	□□□□□ -1.5
PPP4R1-209	ENST00000578329	NOM1	Q5C9Z4	860 aa	Known RBP	5.65	□□□□□ -1.5
PPP4R1-209	ENST00000578329	MFSD14B	Q5SR56	506 aa		5.65	□□□□□ -1.5
PPP4R1-209	ENST00000578329	DCAF8	Q5TAQ9	597 aa		5.65	□□□□□ -1.5
PPP4R1-209	ENST00000578329	CTU1	Q7Z7A3	348 aa	Known RBP	5.65	□□□□□ -1.5
PPP4R1-209	ENST00000578329	IFNL1	Q8IU54	200 aa		5.65	□□□□□ -1.5
PPP4R1-209	ENST00000578329	ZFPM1	Q8IX07	1006 aa		5.65	□□□□□ -1.5
PPP4R1-209	ENST00000578329	DZIP1L	Q8IYY4	767 aa	Known RBP	5.65	□□□□□ -1.5
PPP4R1-209	ENST00000578329	BRI3BP	Q8WY22	251 aa		5.65	□□□□□ -1.5
PPP4R1-209	ENST00000578329	BEGAIN	Q9BUH8	593 aa		5.65	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms