RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 SNED1Q8TER0 1413 aa13.75□□□□□ -0.21
TRAPPC8-204ENST00000578252 C21orf2O43822 256 aa13.75□□□□□ -0.21
TRAPPC8-204ENST00000578252 IFIT1P09914 478 aaKnown RBP13.75□□□□□ -0.21
TRAPPC8-204ENST00000578252 SLC5A1P13866 664 aa13.75□□□□□ -0.21
TRAPPC8-204ENST00000578252 GPSM2P81274 684 aa13.75□□□□□ -0.21
TRAPPC8-204ENST00000578252 TNNI3KQ59H18 835 aa13.75□□□□□ -0.21
TRAPPC8-204ENST00000578252 CHD1LQ86WJ1 897 aa13.75□□□□□ -0.21
TRAPPC8-204ENST00000578252 SUPT20HQ8NEM7 779 aa13.75□□□□□ -0.21
TRAPPC8-204ENST00000578252 HELBQ8NG08 1087 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC8-204ENST00000578252 GGA1Q9UJY5 639 aa13.75□□□□□ -0.21
TRAPPC8-204ENST00000578252 NSFL1CQ9UNZ2 370 aaKnown RBP13.75□□□□□ -0.21
TRAPPC8-204ENST00000578252 FPGT-TNNI3KV9GXZ4 949 aa13.75□□□□□ -0.21
TRAPPC8-204ENST00000578252 DUOX1Q9NRD9 1551 aa13.75□□□□□ -0.21
TRAPPC8-204ENST00000578252 ZNF804BA4D1E1 1349 aa13.74□□□□□ -0.21
TRAPPC8-204ENST00000578252 TAF5LO75529 589 aa13.74□□□□□ -0.21
TRAPPC8-204ENST00000578252 FGFR2P21802 821 aa13.74□□□□□ -0.21
TRAPPC8-204ENST00000578252 PSMD1Q99460 953 aa13.74□□□□□ -0.21
TRAPPC8-204ENST00000578252 EYA3Q99504 573 aa13.74□□□□□ -0.21
TRAPPC8-204ENST00000578252 RTFDC1Q9BY42 306 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC8-204ENST00000578252 IL1RAPL2Q9NP60 686 aa13.74□□□□□ -0.21
TRAPPC8-204ENST00000578252 A0A1B0GUL7 405 aa13.73□□□□□ -0.21
TRAPPC8-204ENST00000578252 UFL1O94874 794 aa13.73□□□□□ -0.21
TRAPPC8-204ENST00000578252 IFIT2P09913 472 aaKnown RBP13.73□□□□□ -0.21
TRAPPC8-204ENST00000578252 C15orf52Q6ZUT6 534 aaKnown RBP13.73□□□□□ -0.21
TRAPPC8-204ENST00000578252 AACSQ86V21 672 aa13.73□□□□□ -0.21
TRAPPC8-204ENST00000578252 ZNF710Q8N1W2 664 aa13.73□□□□□ -0.21
TRAPPC8-204ENST00000578252 TBC1D16Q8TBP0 767 aa13.73□□□□□ -0.21
TRAPPC8-204ENST00000578252 GPATCH3Q96I76 525 aa13.73□□□□□ -0.21
TRAPPC8-204ENST00000578252 VPS33BQ9H267 617 aa13.73□□□□□ -0.21
TRAPPC8-204ENST00000578252 MED23Q9ULK4 1368 aa13.72□□□□□ -0.21
TRAPPC8-204ENST00000578252 LTBP3Q9NS15 1303 aa13.72□□□□□ -0.21
TRAPPC8-204ENST00000578252 C6orf229H3BNL8 230 aa13.72□□□□□ -0.21
TRAPPC8-204ENST00000578252 SMARCA5O60264 1052 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC8-204ENST00000578252 EMP3P54852 163 aa13.72□□□□□ -0.21
TRAPPC8-204ENST00000578252 FKBP4Q02790 459 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRAPPC8-204ENST00000578252 EAF2Q96CJ1 260 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC8-204ENST00000578252 LNPKQ9C0E8 428 aa13.72□□□□□ -0.21
TRAPPC8-204ENST00000578252 CAVIN4Q5BKX8 364 aa13.71□□□□□ -0.21
TRAPPC8-204ENST00000578252 GORABQ5T7V8 394 aa13.71□□□□□ -0.21
TRAPPC8-204ENST00000578252 OLFM4Q6UX06 510 aa13.71□□□□□ -0.21
TRAPPC8-204ENST00000578252 CDAN1Q8IWY9 1227 aa13.71□□□□□ -0.21
TRAPPC8-204ENST00000578252 NEUROD6Q96NK8 337 aa13.71□□□□□ -0.21
TRAPPC8-204ENST00000578252 TIMM10P62072 90 aa13.7□□□□□ -0.22
TRAPPC8-204ENST00000578252 ZNF804AQ7Z570 1209 aa13.7□□□□□ -0.22
TRAPPC8-204ENST00000578252 XAGE2Q96GT9 111 aa13.7□□□□□ -0.22
TRAPPC8-204ENST00000578252 ZC3H12CQ9C0D7 883 aaKnown RBP13.7□□□□□ -0.22
TRAPPC8-204ENST00000578252 CCDC8Q9H0W5 538 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC8-204ENST00000578252 TAOK3Q9H2K8 898 aa13.7□□□□□ -0.22
TRAPPC8-204ENST00000578252 POLLQ9UGP5 575 aa13.7□□□□□ -0.22
TRAPPC8-204ENST00000578252 WWC3Q9ULE0 1092 aa13.7□□□□□ -0.22
TRAPPC8-204ENST00000578252 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC8-204ENST00000578252 MYH13Q9UKX3 1938 aa13.7□□□□□ -0.22
TRAPPC8-204ENST00000578252 AOX1Q06278 1338 aa13.69□□□□□ -0.22
TRAPPC8-204ENST00000578252 TTC41PQ6P2S7 1318 aa13.69□□□□□ -0.22
TRAPPC8-204ENST00000578252 IRS2Q9Y4H2 1338 aa13.69□□□□□ -0.22
TRAPPC8-204ENST00000578252 MX1P20591 662 aa13.69□□□□□ -0.22
TRAPPC8-204ENST00000578252 WASHC4Q2M389 1173 aa13.69□□□□□ -0.22
TRAPPC8-204ENST00000578252 CCDC158Q5M9N0 1113 aa13.69□□□□□ -0.22
TRAPPC8-204ENST00000578252 SLC51AQ86UW1 340 aa13.69□□□□□ -0.22
TRAPPC8-204ENST00000578252 VPS37DQ86XT2 251 aa13.69□□□□□ -0.22
TRAPPC8-204ENST00000578252 DBNDD2Q9BQY9 259 aa13.69□□□□□ -0.22
TRAPPC8-204ENST00000578252 GNL3LQ9NVN8 582 aaKnown RBP13.69□□□□□ -0.22
TRAPPC8-204ENST00000578252 DBNLQ9UJU6 430 aaKnown RBP13.69□□□□□ -0.22
TRAPPC8-204ENST00000578252 SALL3Q9BXA9 1300 aa13.68□□□□□ -0.22
TRAPPC8-204ENST00000578252 C2orf72A6NCS6 295 aa13.68□□□□□ -0.22
TRAPPC8-204ENST00000578252 SNAP23O00161 211 aa13.68□□□□□ -0.22
TRAPPC8-204ENST00000578252 RIMBP2O15034 1052 aa13.68□□□□□ -0.22
TRAPPC8-204ENST00000578252 ERC2O15083 957 aa13.68□□□□□ -0.22
TRAPPC8-204ENST00000578252 GRIN3BO60391 1043 aa13.68□□□□□ -0.22
TRAPPC8-204ENST00000578252 UQCRFS1P1P0C7P4 283 aa13.68□□□□□ -0.22
TRAPPC8-204ENST00000578252 KIAA2012Q0VF49 1180 aa13.68□□□□□ -0.22
TRAPPC8-204ENST00000578252 ZNF512BQ96KM6 892 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC8-204ENST00000578252 BCL11AQ9H165 835 aa13.68□□□□□ -0.22
TRAPPC8-204ENST00000578252 ECHDC1Q9NTX5 307 aa13.68□□□□□ -0.22
TRAPPC8-204ENST00000578252 STAP2Q9UGK3 403 aa13.68□□□□□ -0.22
TRAPPC8-204ENST00000578252 NFKBIEO00221 500 aa13.67□□□□□ -0.22
TRAPPC8-204ENST00000578252 SEMA3EO15041 775 aa13.67□□□□□ -0.22
TRAPPC8-204ENST00000578252 ADORA1P30542 326 aa13.67□□□□□ -0.22
TRAPPC8-204ENST00000578252 HIBADHP31937 336 aaKnown RBP13.67□□□□□ -0.22
TRAPPC8-204ENST00000578252 GPR162Q16538 588 aa13.67□□□□□ -0.22
TRAPPC8-204ENST00000578252 TTC39AQ5SRH9 613 aa13.67□□□□□ -0.22
TRAPPC8-204ENST00000578252 CCDC102BQ68D86 513 aa13.67□□□□□ -0.22
TRAPPC8-204ENST00000578252 FBXO33Q7Z6M2 555 aa13.67□□□□□ -0.22
TRAPPC8-204ENST00000578252 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRAPPC8-204ENST00000578252 FAM84BQ96KN1 310 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC8-204ENST00000578252 COA1Q9GZY4 146 aa13.67□□□□□ -0.22
TRAPPC8-204ENST00000578252 OSBPL3Q9H4L5 887 aa13.67□□□□□ -0.22
TRAPPC8-204ENST00000578252 TLR7Q9NYK1 1049 aaKnown RBP13.67□□□□□ -0.22
TRAPPC8-204ENST00000578252 DICER1Q9UPY3 1922 aaKnown RBP13.66□□□□□ -0.22
TRAPPC8-204ENST00000578252 KIF3CO14782 793 aa13.66□□□□□ -0.22
TRAPPC8-204ENST00000578252 PPIP5K2O43314 1243 aa13.66□□□□□ -0.22
TRAPPC8-204ENST00000578252 YBX3P16989 372 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRAPPC8-204ENST00000578252 ATP5JP18859 108 aa13.66□□□□□ -0.22
TRAPPC8-204ENST00000578252 PDE4AP27815 886 aa13.66□□□□□ -0.22
TRAPPC8-204ENST00000578252 ARID4AP29374 1257 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC8-204ENST00000578252 IARSP41252 1262 aaKnown RBP13.66□□□□□ -0.22
TRAPPC8-204ENST00000578252 GYG1P46976 350 aa13.66□□□□□ -0.22
TRAPPC8-204ENST00000578252 PDE1AP54750 535 aa13.66□□□□□ -0.22
TRAPPC8-204ENST00000578252 PLEKHM2Q8IWE5 1019 aa13.66□□□□□ -0.22
TRAPPC8-204ENST00000578252 C16orf71Q8IYS4 520 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms