RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 CCDC129Q6ZRS4 1044 aa15.85■□□□□ 0.13
CTC1-203ENST00000578240 TMC4Q7Z404 712 aa15.85■□□□□ 0.13
CTC1-203ENST00000578240 TICAM2Q86XR7 235 aa15.85■□□□□ 0.13
CTC1-203ENST00000578240 SP8Q8IXZ3 490 aa15.85■□□□□ 0.13
CTC1-203ENST00000578240 ANKIB1Q9P2G1 1089 aa15.85■□□□□ 0.13
CTC1-203ENST00000578240 POLLQ9UGP5 575 aa15.85■□□□□ 0.13
CTC1-203ENST00000578240 LEMD3Q9Y2U8 911 aa15.85■□□□□ 0.13
CTC1-203ENST00000578240 ECM29Q5VYK3 1845 aa15.85■□□□□ 0.13
CTC1-203ENST00000578240 UFL1O94874 794 aa15.84■□□□□ 0.13
CTC1-203ENST00000578240 PRPF40BQ6NWY9 871 aaKnown RBP15.84■□□□□ 0.13
CTC1-203ENST00000578240 WWC3Q9ULE0 1092 aa15.84■□□□□ 0.13
CTC1-203ENST00000578240 PDS5AQ29RF7 1337 aaKnown RBP15.84■□□□□ 0.13
CTC1-203ENST00000578240 M0R2C6 588 aa15.83■□□□□ 0.13
CTC1-203ENST00000578240 RNF113AO15541 343 aaKnown RBP15.83■□□□□ 0.13
CTC1-203ENST00000578240 YY1P25490 414 aa15.83■□□□□ 0.13
CTC1-203ENST00000578240 TBC1D16Q8TBP0 767 aa15.83■□□□□ 0.13
CTC1-203ENST00000578240 RUFY2Q8WXA3 655 aa15.83■□□□□ 0.13
CTC1-203ENST00000578240 NSFL1CQ9UNZ2 370 aaKnown RBP15.83■□□□□ 0.13
CTC1-203ENST00000578240 DDX60LQ5H9U9 1706 aaKnown RBP15.83■□□□□ 0.12
CTC1-203ENST00000578240 TCRBV5S4A2TA0A5A2 114 aa15.83■□□□□ 0.12
CTC1-203ENST00000578240 H0YIN7 160 aa15.83■□□□□ 0.12
CTC1-203ENST00000578240 FOXP2O15409 715 aa15.83■□□□□ 0.12
CTC1-203ENST00000578240 EPB41L2O43491 1005 aaKnown RBP15.83■□□□□ 0.12
CTC1-203ENST00000578240 ALDH1B1P30837 517 aa15.83■□□□□ 0.12
CTC1-203ENST00000578240 GPR162Q16538 588 aa15.83■□□□□ 0.12
CTC1-203ENST00000578240 NLGN2Q8NFZ4 835 aa15.83■□□□□ 0.12
CTC1-203ENST00000578240 OSBP2Q969R2 916 aa15.83■□□□□ 0.12
CTC1-203ENST00000578240 IL17RAQ96F46 866 aa15.83■□□□□ 0.12
CTC1-203ENST00000578240 NAV1Q8NEY1 1877 aa15.82■□□□□ 0.12
CTC1-203ENST00000578240 COL4A5P29400 1685 aa15.82■□□□□ 0.12
CTC1-203ENST00000578240 EIF5BO60841 1220 aaKnown RBP15.82■□□□□ 0.12
CTC1-203ENST00000578240 KCNA3P22001 575 aa15.82■□□□□ 0.12
CTC1-203ENST00000578240 ATP2B4P23634 1241 aa15.82■□□□□ 0.12
CTC1-203ENST00000578240 HSPA4P34932 840 aa15.82■□□□□ 0.12
CTC1-203ENST00000578240 ADD2P35612 726 aa15.82■□□□□ 0.12
CTC1-203ENST00000578240 TTF1Q15361 905 aaPredicted RBP15.82■□□□□ 0.12
CTC1-203ENST00000578240 CAVIN4Q5BKX8 364 aa15.82■□□□□ 0.12
CTC1-203ENST00000578240 C7orf43Q8WVR3 580 aa15.82■□□□□ 0.12
CTC1-203ENST00000578240 ZNF622Q969S3 477 aaKnown RBP eCLIP15.82■□□□□ 0.12
CTC1-203ENST00000578240 GGA1Q9UJY5 639 aa15.82■□□□□ 0.12
CTC1-203ENST00000578240 TIAM2Q8IVF5 1701 aa15.82■□□□□ 0.12
CTC1-203ENST00000578240 PDE6AP16499 860 aa15.81■□□□□ 0.12
CTC1-203ENST00000578240 HIBADHP31937 336 aaKnown RBP15.81■□□□□ 0.12
CTC1-203ENST00000578240 ZNF384Q8TF68 577 aa15.81■□□□□ 0.12
CTC1-203ENST00000578240 HELLSQ9NRZ9 838 aa15.81■□□□□ 0.12
CTC1-203ENST00000578240 CD2APQ9Y5K6 639 aa15.81■□□□□ 0.12
CTC1-203ENST00000578240 SEMA3EO15041 775 aa15.8■□□□□ 0.12
CTC1-203ENST00000578240 IDH1O75874 414 aaKnown RBP15.8■□□□□ 0.12
CTC1-203ENST00000578240 MCMDC2Q4G0Z9 681 aa15.8■□□□□ 0.12
CTC1-203ENST00000578240 IPO9Q96P70 1041 aaKnown RBP15.8■□□□□ 0.12
CTC1-203ENST00000578240 PUS7LQ9H0K6 701 aaKnown RBP15.8■□□□□ 0.12
CTC1-203ENST00000578240 CD2BP2O95400 341 aaKnown RBP15.79■□□□□ 0.12
CTC1-203ENST00000578240 ZFYP08048 801 aaPredicted RBP15.79■□□□□ 0.12
CTC1-203ENST00000578240 VPS53Q5VIR6 699 aa15.79■□□□□ 0.12
CTC1-203ENST00000578240 TDRD7Q8NHU6 1098 aaKnown RBP15.79■□□□□ 0.12
CTC1-203ENST00000578240 APPBP2Q92624 585 aa15.79■□□□□ 0.12
CTC1-203ENST00000578240 MAP4K1Q92918 833 aa15.79■□□□□ 0.12
CTC1-203ENST00000578240 GNL3LQ9NVN8 582 aaKnown RBP15.79■□□□□ 0.12
CTC1-203ENST00000578240 DENND2AQ9ULE3 1009 aa15.79■□□□□ 0.12
CTC1-203ENST00000578240 ZNF532Q9HCE3 1301 aa15.79■□□□□ 0.12
CTC1-203ENST00000578240 DPEP1P16444 411 aa15.79■□□□□ 0.12
CTC1-203ENST00000578240 SLC9C2Q5TAH2 1124 aa15.79■□□□□ 0.12
CTC1-203ENST00000578240 VPS37DQ86XT2 251 aa15.79■□□□□ 0.12
CTC1-203ENST00000578240 RASEFQ8IZ41 740 aa15.79■□□□□ 0.12
CTC1-203ENST00000578240 RBM8AQ9Y5S9 174 aaKnown RBP15.79■□□□□ 0.12
CTC1-203ENST00000578240 NECTIN1Q15223 517 aa15.78■□□□□ 0.12
CTC1-203ENST00000578240 UBE3CQ15386 1083 aa15.78■□□□□ 0.12
CTC1-203ENST00000578240 ADGRA1Q86SQ6 560 aa15.78■□□□□ 0.12
CTC1-203ENST00000578240 KCNB2Q92953 911 aa15.78■□□□□ 0.12
CTC1-203ENST00000578240 CNKSR1Q969H4 720 aa15.78■□□□□ 0.12
CTC1-203ENST00000578240 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.78■□□□□ 0.12
CTC1-203ENST00000578240 JAG2Q9Y219 1238 aa15.78■□□□□ 0.12
CTC1-203ENST00000578240 TAF6LQ9Y6J9 622 aa15.78■□□□□ 0.12
CTC1-203ENST00000578240 UTRNP46939 3433 aa15.77■□□□□ 0.12
CTC1-203ENST00000578240 IL1R1P14778 569 aa15.77■□□□□ 0.12
CTC1-203ENST00000578240 ZNF804AQ7Z570 1209 aa15.77■□□□□ 0.12
CTC1-203ENST00000578240 MPNDQ8N594 471 aa15.77■□□□□ 0.12
CTC1-203ENST00000578240 MAGEB6Q8N7X4 407 aa15.77■□□□□ 0.12
CTC1-203ENST00000578240 CD209Q9NNX6 404 aa15.77■□□□□ 0.12
CTC1-203ENST00000578240 SNX14Q9Y5W7 946 aa15.77■□□□□ 0.12
CTC1-203ENST00000578240 MYH1P12882 1939 aa15.77■□□□□ 0.12
CTC1-203ENST00000578240 SALL1Q9NSC2 1324 aa15.77■□□□□ 0.12
CTC1-203ENST00000578240 DICER1Q9UPY3 1922 aaKnown RBP15.77■□□□□ 0.11
CTC1-203ENST00000578240 A0A0G2JLW4 131 aa15.76■□□□□ 0.11
CTC1-203ENST00000578240 PRDX5P30044 214 aa15.76■□□□□ 0.11
CTC1-203ENST00000578240 COL9A3Q14050 684 aaPredicted RBP15.76■□□□□ 0.11
CTC1-203ENST00000578240 KIAA1211Q6ZU35 1233 aa15.76■□□□□ 0.11
CTC1-203ENST00000578240 RPAP1Q9BWH6 1393 aaPredicted RBP15.76■□□□□ 0.11
CTC1-203ENST00000578240 C6orf229H3BNL8 230 aa15.76■□□□□ 0.11
CTC1-203ENST00000578240 GPAA1O43292 621 aa15.76■□□□□ 0.11
CTC1-203ENST00000578240 ANAPC15P60006 121 aa15.76■□□□□ 0.11
CTC1-203ENST00000578240 GRIK5Q16478 980 aa15.76■□□□□ 0.11
CTC1-203ENST00000578240 WASHC4Q2M389 1173 aa15.76■□□□□ 0.11
CTC1-203ENST00000578240 DPP8Q6V1X1 898 aaPredicted RBP15.76■□□□□ 0.11
CTC1-203ENST00000578240 RTFDC1Q9BY42 306 aaPredicted RBP15.76■□□□□ 0.11
CTC1-203ENST00000578240 TBC1D2Q9BYX2 928 aa15.76■□□□□ 0.11
CTC1-203ENST00000578240 SBF1O95248 1867 aa15.76■□□□□ 0.11
CTC1-203ENST00000578240 HSPD1P10809 573 aaKnown RBP15.75■□□□□ 0.11
CTC1-203ENST00000578240 MAP3K12Q12852 859 aa15.75■□□□□ 0.11
CTC1-203ENST00000578240 CHAF1AQ13111 956 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms