RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 LPIN2Q92539 896 aa9.78□□□□□ -0.84
SKA2-203ENST00000578105 JARID2Q92833 1246 aaPredicted RBP9.78□□□□□ -0.84
SKA2-203ENST00000578105 ZNF274Q96GC6 653 aaPredicted RBP9.78□□□□□ -0.84
SKA2-203ENST00000578105 XAGE2Q96GT9 111 aa9.78□□□□□ -0.84
SKA2-203ENST00000578105 SCAND2PQ9GZW5 306 aaPredicted RBP9.78□□□□□ -0.84
SKA2-203ENST00000578105 ZSCAN16Q9H4T2 348 aaPredicted RBP9.78□□□□□ -0.84
SKA2-203ENST00000578105 TRMT112Q9UI30 125 aaKnown RBP9.78□□□□□ -0.84
SKA2-203ENST00000578105 BRPF3Q9ULD4 1205 aa9.78□□□□□ -0.84
SKA2-203ENST00000578105 TPCN1Q9ULQ1 816 aa9.78□□□□□ -0.84
SKA2-203ENST00000578105 ZBTB1Q9Y2K1 713 aa9.78□□□□□ -0.84
SKA2-203ENST00000578105 ZMYM6O95789 1325 aa9.78□□□□□ -0.84
SKA2-203ENST00000578105 RIC1Q4ADV7 1423 aa9.77□□□□□ -0.85
SKA2-203ENST00000578105 PDE8BO95263 885 aa9.77□□□□□ -0.85
SKA2-203ENST00000578105 CYP21A2P08686 494 aa9.77□□□□□ -0.85
SKA2-203ENST00000578105 HMGB2P26583 209 aaKnown RBP9.77□□□□□ -0.85
SKA2-203ENST00000578105 ARID4AP29374 1257 aaPredicted RBP9.77□□□□□ -0.85
SKA2-203ENST00000578105 PRIM1P49642 420 aaKnown RBP9.77□□□□□ -0.85
SKA2-203ENST00000578105 EVCP57679 992 aa9.77□□□□□ -0.85
SKA2-203ENST00000578105 KRT85P78386 507 aa9.77□□□□□ -0.85
SKA2-203ENST00000578105 TOB2Q14106 344 aaPredicted RBP9.77□□□□□ -0.85
SKA2-203ENST00000578105 UBE3CQ15386 1083 aa9.77□□□□□ -0.85
SKA2-203ENST00000578105 PUM3Q15397 648 aaKnown RBP9.77□□□□□ -0.85
SKA2-203ENST00000578105 IMMTQ16891 758 aaKnown RBP9.77□□□□□ -0.85
SKA2-203ENST00000578105 UVSSAQ2YD98 709 aa9.77□□□□□ -0.85
SKA2-203ENST00000578105 LARP1BQ659C4 914 aaKnown RBP9.77□□□□□ -0.85
SKA2-203ENST00000578105 NOL8Q76FK4 1167 aaKnown RBP9.77□□□□□ -0.85
SKA2-203ENST00000578105 GTF3C6Q969F1 213 aa9.77□□□□□ -0.85
SKA2-203ENST00000578105 TRIM44Q96DX7 344 aaPredicted RBP9.77□□□□□ -0.85
SKA2-203ENST00000578105 FAM89AQ96GI7 184 aa9.77□□□□□ -0.85
SKA2-203ENST00000578105 CNNM1Q9NRU3 951 aa9.77□□□□□ -0.85
SKA2-203ENST00000578105 MTMR6Q9Y217 621 aa9.77□□□□□ -0.85
SKA2-203ENST00000578105 MYH7P12883 1935 aa9.77□□□□□ -0.85
SKA2-203ENST00000578105 LOC102724428A0A0B4J2F2 783 aa9.76□□□□□ -0.85
SKA2-203ENST00000578105 DHX16O60231 1041 aaKnown RBP9.76□□□□□ -0.85
SKA2-203ENST00000578105 PFKFB2O60825 505 aa9.76□□□□□ -0.85
SKA2-203ENST00000578105 HSPD1P10809 573 aaKnown RBP9.76□□□□□ -0.85
SKA2-203ENST00000578105 SIK1P57059 783 aa9.76□□□□□ -0.85
SKA2-203ENST00000578105 EXOSC10Q01780 885 aaKnown RBP9.76□□□□□ -0.85
SKA2-203ENST00000578105 CCDC152Q4G0S7 254 aa9.76□□□□□ -0.85
SKA2-203ENST00000578105 CCDC183Q5T5S1 534 aa9.76□□□□□ -0.85
SKA2-203ENST00000578105 USP48Q86UV5 1035 aa9.76□□□□□ -0.85
SKA2-203ENST00000578105 GAS2L3Q86XJ1 694 aa9.76□□□□□ -0.85
SKA2-203ENST00000578105 VGLL2Q8N8G2 317 aa9.76□□□□□ -0.85
SKA2-203ENST00000578105 SLC4A9Q96Q91 983 aa9.76□□□□□ -0.85
SKA2-203ENST00000578105 CDC5LQ99459 802 aaKnown RBP9.76□□□□□ -0.85
SKA2-203ENST00000578105 UTP14AQ9BVJ6 771 aaKnown RBP9.76□□□□□ -0.85
SKA2-203ENST00000578105 TBC1D2BQ9UPU7 963 aa9.76□□□□□ -0.85
SKA2-203ENST00000578105 ZNF330Q9Y3S2 320 aaPredicted RBP9.76□□□□□ -0.85
SKA2-203ENST00000578105 MAST3O60307 1309 aa9.76□□□□□ -0.85
SKA2-203ENST00000578105 BCORQ6W2J9 1755 aa9.75□□□□□ -0.85
SKA2-203ENST00000578105 LARGE1O95461 756 aa9.75□□□□□ -0.85
SKA2-203ENST00000578105 SLC5A1P13866 664 aa9.75□□□□□ -0.85
SKA2-203ENST00000578105 FGD1P98174 961 aa9.75□□□□□ -0.85
SKA2-203ENST00000578105 HLFQ16534 295 aa9.75□□□□□ -0.85
SKA2-203ENST00000578105 NAA16Q6N069 864 aaPredicted RBP9.75□□□□□ -0.85
SKA2-203ENST00000578105 Q6ZUG5 572 aa9.75□□□□□ -0.85
SKA2-203ENST00000578105 SMARCC2Q8TAQ2 1214 aa9.75□□□□□ -0.85
SKA2-203ENST00000578105 SYTL4Q96C24 671 aaPredicted RBP9.75□□□□□ -0.85
SKA2-203ENST00000578105 EDC3Q96F86 508 aaKnown RBP9.75□□□□□ -0.85
SKA2-203ENST00000578105 ZNF594Q96JF6 807 aaPredicted RBP9.75□□□□□ -0.85
SKA2-203ENST00000578105 MTA3Q9BTC8 594 aa9.75□□□□□ -0.85
SKA2-203ENST00000578105 PUS3Q9BZE2 481 aaKnown RBP9.75□□□□□ -0.85
SKA2-203ENST00000578105 CFAP45Q9UL16 551 aa9.75□□□□□ -0.85
SKA2-203ENST00000578105 COL5A3P25940 1745 aaPredicted RBP9.75□□□□□ -0.85
SKA2-203ENST00000578105 E7EWF7 191 aa9.74□□□□□ -0.85
SKA2-203ENST00000578105 FGFR2P21802 821 aa9.74□□□□□ -0.85
SKA2-203ENST00000578105 ATP6V1AP38606 617 aa9.74□□□□□ -0.85
SKA2-203ENST00000578105 IGHMBP2P38935 993 aaKnown RBP9.74□□□□□ -0.85
SKA2-203ENST00000578105 CRKLP46109 303 aaKnown RBP9.74□□□□□ -0.85
SKA2-203ENST00000578105 ST3GAL1Q11201 340 aa9.74□□□□□ -0.85
SKA2-203ENST00000578105 ALX1Q15699 326 aa9.74□□□□□ -0.85
SKA2-203ENST00000578105 VPS72Q15906 364 aa9.74□□□□□ -0.85
SKA2-203ENST00000578105 RC3H1Q5TC82 1133 aaKnown RBP9.74□□□□□ -0.85
SKA2-203ENST00000578105 INTS5Q6P9B9 1019 aaKnown RBP9.74□□□□□ -0.85
SKA2-203ENST00000578105 POTEEQ6S8J3 1075 aa9.74□□□□□ -0.85
SKA2-203ENST00000578105 TSPY26PQ9H489 355 aa9.74□□□□□ -0.85
SKA2-203ENST00000578105 GREM2Q9H772 168 aa9.74□□□□□ -0.85
SKA2-203ENST00000578105 TMEM63CQ9P1W3 806 aa9.74□□□□□ -0.85
SKA2-203ENST00000578105 CNTNAP4Q9C0A0 1308 aa9.74□□□□□ -0.85
SKA2-203ENST00000578105 CAMTA2O94983 1202 aa9.73□□□□□ -0.85
SKA2-203ENST00000578105 CPA1P15085 419 aa9.73□□□□□ -0.85
SKA2-203ENST00000578105 GNAT2P19087 354 aa9.73□□□□□ -0.85
SKA2-203ENST00000578105 MCM5P33992 734 aa9.73□□□□□ -0.85
SKA2-203ENST00000578105 ADD2P35612 726 aa9.73□□□□□ -0.85
SKA2-203ENST00000578105 NT5C2P49902 561 aa9.73□□□□□ -0.85
SKA2-203ENST00000578105 FKBP4Q02790 459 aaKnown RBP eCLIP9.73□□□□□ -0.85
SKA2-203ENST00000578105 ARSIQ5FYB1 569 aa9.73□□□□□ -0.85
SKA2-203ENST00000578105 PLCD3Q8N3E9 789 aa9.73□□□□□ -0.85
SKA2-203ENST00000578105 NCOA7Q8NI08 942 aa9.73□□□□□ -0.85
SKA2-203ENST00000578105 PDLIM2Q96JY6 352 aa9.73□□□□□ -0.85
SKA2-203ENST00000578105 MPHOSPH8Q99549 860 aa9.73□□□□□ -0.85
SKA2-203ENST00000578105 AKAP11Q9UKA4 1901 aa9.73□□□□□ -0.85
SKA2-203ENST00000578105 UBN2Q6ZU65 1347 aa9.73□□□□□ -0.85
SKA2-203ENST00000578105 LAMA4Q16363 1823 aa9.72□□□□□ -0.85
SKA2-203ENST00000578105 VPS37CA5D8V6 355 aaPredicted RBP9.72□□□□□ -0.85
SKA2-203ENST00000578105 ZNF213O14771 459 aa9.72□□□□□ -0.85
SKA2-203ENST00000578105 CAVIN2O95810 425 aa9.72□□□□□ -0.85
SKA2-203ENST00000578105 GPTP24298 496 aa9.72□□□□□ -0.85
SKA2-203ENST00000578105 CLCN1P35523 988 aa9.72□□□□□ -0.85
SKA2-203ENST00000578105 PBX2P40425 430 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms