RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 CTAGE8P0CG41 777 aa12.45□□□□□ -0.42
RNF43-203ENST00000577716 MATR3P43243 847 aaKnown RBP eCLIP12.45□□□□□ -0.429e-7■■■□□ 15.7
RNF43-203ENST00000577716 PTH1RQ03431 593 aa12.45□□□□□ -0.42
RNF43-203ENST00000577716 KARSQ15046 597 aaKnown RBP12.45□□□□□ -0.42
RNF43-203ENST00000577716 CTAGE6Q86UF2 777 aa12.45□□□□□ -0.42
RNF43-203ENST00000577716 CTAGE4Q8IX94 777 aa12.45□□□□□ -0.42
RNF43-203ENST00000577716 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.45□□□□□ -0.42
RNF43-203ENST00000577716 ZNF500O60304 480 aaPredicted RBP12.45□□□□□ -0.42
RNF43-203ENST00000577716 NBPF6Q5VWK0 638 aa12.45□□□□□ -0.42
RNF43-203ENST00000577716 NBPF4Q96M43 638 aa12.45□□□□□ -0.42
RNF43-203ENST00000577716 SSH2Q76I76 1423 aa12.45□□□□□ -0.42
RNF43-203ENST00000577716 NEFHP12036 1026 aa12.44□□□□□ -0.42
RNF43-203ENST00000577716 CCDC152Q4G0S7 254 aa12.44□□□□□ -0.42
RNF43-203ENST00000577716 CCDC40Q4G0X9 1142 aa12.44□□□□□ -0.42
RNF43-203ENST00000577716 VPS36Q86VN1 386 aa12.44□□□□□ -0.42
RNF43-203ENST00000577716 RMND1Q9NWS8 449 aa12.44□□□□□ -0.42
RNF43-203ENST00000577716 MTMR6Q9Y217 621 aa12.44□□□□□ -0.42
RNF43-203ENST00000577716 ADAMTS2O95450 1211 aa12.44□□□□□ -0.42
RNF43-203ENST00000577716 CCDC96Q2M329 555 aa12.44□□□□□ -0.42
RNF43-203ENST00000577716 CTR9Q6PD62 1173 aa12.44□□□□□ -0.42
RNF43-203ENST00000577716 TSC1Q92574 1164 aa12.44□□□□□ -0.42
RNF43-203ENST00000577716 ALS2CR12Q96Q35 445 aa12.44□□□□□ -0.42
RNF43-203ENST00000577716 GCKRQ14397 625 aa12.44□□□□□ -0.42
RNF43-203ENST00000577716 LZTFL1Q9NQ48 299 aa12.44□□□□□ -0.42
RNF43-203ENST00000577716 METP08581 1390 aa12.44□□□□□ -0.42
RNF43-203ENST00000577716 STAT6P42226 847 aa12.44□□□□□ -0.42
RNF43-203ENST00000577716 HLTFQ14527 1009 aaKnown RBP eCLIP12.44□□□□□ -0.42
RNF43-203ENST00000577716 UNC5CLQ8IV45 518 aa12.44□□□□□ -0.42
RNF43-203ENST00000577716 FAM114A1Q8IWE2 563 aa12.44□□□□□ -0.42
RNF43-203ENST00000577716 KRI1Q8N9T8 703 aaKnown RBP12.44□□□□□ -0.42
RNF43-203ENST00000577716 EAF2Q96CJ1 260 aaPredicted RBP12.44□□□□□ -0.42
RNF43-203ENST00000577716 TIGD1Q96MW7 591 aa12.44□□□□□ -0.42
RNF43-203ENST00000577716 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.44□□□□□ -0.422e-8■■□□□ 14
RNF43-203ENST00000577716 CRNKL1Q9BZJ0 848 aaKnown RBP12.44□□□□□ -0.42
RNF43-203ENST00000577716 CDC42BPBQ9Y5S2 1711 aa12.44□□□□□ -0.42
RNF43-203ENST00000577716 CROCC2H7BZ55 1655 aa12.43□□□□□ -0.42
RNF43-203ENST00000577716 IBTKQ9P2D0 1353 aaPredicted RBP12.43□□□□□ -0.42
RNF43-203ENST00000577716 ANO1Q5XXA6 986 aa12.43□□□□□ -0.42
RNF43-203ENST00000577716 GTPBP4Q9BZE4 634 aaKnown RBP12.43□□□□□ -0.42
RNF43-203ENST00000577716 OSBPL3Q9H4L5 887 aa12.43□□□□□ -0.42
RNF43-203ENST00000577716 ELP1O95163 1332 aa12.43□□□□□ -0.42
RNF43-203ENST00000577716 KIF20AO95235 890 aa12.43□□□□□ -0.42
RNF43-203ENST00000577716 CRACR2BQ8N4Y2 399 aaPredicted RBP12.43□□□□□ -0.42
RNF43-203ENST00000577716 ERO1AQ96HE7 468 aa12.43□□□□□ -0.42
RNF43-203ENST00000577716 TMEM2Q9UHN6 1383 aa12.43□□□□□ -0.42
RNF43-203ENST00000577716 PSMA7O14818 248 aa12.43□□□□□ -0.42
RNF43-203ENST00000577716 KCNQ3O43525 872 aa12.43□□□□□ -0.42
RNF43-203ENST00000577716 LDHCP07864 332 aa12.43□□□□□ -0.42
RNF43-203ENST00000577716 CYLC1P35663 651 aaPredicted RBP12.43□□□□□ -0.42
RNF43-203ENST00000577716 RASEFQ8IZ41 740 aa12.43□□□□□ -0.42
RNF43-203ENST00000577716 MIGA1Q8NAN2 632 aa12.43□□□□□ -0.42
RNF43-203ENST00000577716 EHBP1Q8NDI1 1231 aa12.43□□□□□ -0.42
RNF43-203ENST00000577716 FAM89AQ96GI7 184 aa12.43□□□□□ -0.42
RNF43-203ENST00000577716 OGFRQ9NZT2 677 aa12.43□□□□□ -0.42
RNF43-203ENST00000577716 CLTCL1P53675 1640 aa12.43□□□□□ -0.42
RNF43-203ENST00000577716 B4E1Z4 1266 aa12.42□□□□□ -0.42
RNF43-203ENST00000577716 U2AF2P26368 475 aaKnown RBP eCLIP12.42□□□□□ -0.421e-8■■□□□ 13.9
RNF43-203ENST00000577716 CCDC178Q5BJE1 867 aa12.42□□□□□ -0.42
RNF43-203ENST00000577716 PLBD2Q8NHP8 589 aa12.42□□□□□ -0.42
RNF43-203ENST00000577716 UNC13BO14795 1591 aa12.42□□□□□ -0.42
RNF43-203ENST00000577716 IRS4O14654 1257 aaPredicted RBP12.42□□□□□ -0.42
RNF43-203ENST00000577716 BAG3O95817 575 aa12.42□□□□□ -0.42
RNF43-203ENST00000577716 TCERG1LQ5VWI1 586 aa12.42□□□□□ -0.42
RNF43-203ENST00000577716 NAA16Q6N069 864 aaPredicted RBP12.42□□□□□ -0.42
RNF43-203ENST00000577716 TTC6Q86TZ1 520 aa12.42□□□□□ -0.42
RNF43-203ENST00000577716 MAGEB6Q8N7X4 407 aa12.42□□□□□ -0.42
RNF43-203ENST00000577716 GOLGA1Q92805 767 aa12.42□□□□□ -0.42
RNF43-203ENST00000577716 ZNF594Q96JF6 807 aaPredicted RBP12.42□□□□□ -0.42
RNF43-203ENST00000577716 ARHGEF10O15013 1369 aa12.42□□□□□ -0.42
RNF43-203ENST00000577716 A0A0D9SFI3 127 aa12.42□□□□□ -0.42
RNF43-203ENST00000577716 MYO1BO43795 1136 aa12.42□□□□□ -0.42
RNF43-203ENST00000577716 EXOC1Q9NV70 894 aa12.42□□□□□ -0.42
RNF43-203ENST00000577716 STAP2Q9UGK3 403 aa12.42□□□□□ -0.42
RNF43-203ENST00000577716 GOLGA6L7A0A1B0GV03 622 aa12.41□□□□□ -0.42
RNF43-203ENST00000577716 ZBTB9Q96C00 473 aa12.41□□□□□ -0.42
RNF43-203ENST00000577716 ZKSCAN3Q9BRR0 538 aa12.41□□□□□ -0.42
RNF43-203ENST00000577716 NAA15Q9BXJ9 866 aaKnown RBP12.41□□□□□ -0.42
RNF43-203ENST00000577716 TPCN1Q9ULQ1 816 aa12.41□□□□□ -0.42
RNF43-203ENST00000577716 TET3O43151 1660 aa12.41□□□□□ -0.42
RNF43-203ENST00000577716 CTAGE9A4FU28 777 aa12.41□□□□□ -0.42
RNF43-203ENST00000577716 ZNF853P0CG23 659 aa12.41□□□□□ -0.42
RNF43-203ENST00000577716 TMEM132AQ24JP5 1023 aa12.41□□□□□ -0.42
RNF43-203ENST00000577716 ANKRD18AQ8IVF6 992 aa12.41□□□□□ -0.42
RNF43-203ENST00000577716 APPBP2Q92624 585 aa12.41□□□□□ -0.42
RNF43-203ENST00000577716 ZNF496Q96IT1 587 aaPredicted RBP12.41□□□□□ -0.42
RNF43-203ENST00000577716 ANGEL1Q9UNK9 670 aaKnown RBP12.41□□□□□ -0.42
RNF43-203ENST00000577716 KIF1BO60333 1816 aa12.41□□□□□ -0.42
RNF43-203ENST00000577716 TMCO5BA8MYB1 307 aa12.41□□□□□ -0.42
RNF43-203ENST00000577716 SPECC1Q5M775 1068 aa12.41□□□□□ -0.42
RNF43-203ENST00000577716 DHX37Q8IY37 1157 aaKnown RBP12.41□□□□□ -0.42
RNF43-203ENST00000577716 ZFP91Q96JP5 570 aaPredicted RBP12.41□□□□□ -0.42
RNF43-203ENST00000577716 BAG1Q99933 345 aaPredicted RBP12.41□□□□□ -0.42
RNF43-203ENST00000577716 ZSWIM6Q9HCJ5 1215 aa12.41□□□□□ -0.42
RNF43-203ENST00000577716 RGS12O14924 1447 aa12.41□□□□□ -0.42
RNF43-203ENST00000577716 ZNF202O95125 648 aa12.41□□□□□ -0.42
RNF43-203ENST00000577716 NOP2P46087 812 aaKnown RBP12.41□□□□□ -0.42
RNF43-203ENST00000577716 CEP112Q8N8E3 955 aa12.41□□□□□ -0.42
RNF43-203ENST00000577716 DRC1Q96MC2 740 aa12.41□□□□□ -0.42
RNF43-203ENST00000577716 PUF60Q9UHX1 559 aaKnown RBP12.41□□□□□ -0.42
RNF43-203ENST00000577716 GPAA1O43292 621 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms