RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 WNT10BO00744 389 aa19.38■□□□□ 0.69
SF3B3-215ENST00000577085 MAP2K2P36507 400 aa19.38■□□□□ 0.69
SF3B3-215ENST00000577085 DLGAP5Q15398 846 aa19.38■□□□□ 0.69
SF3B3-215ENST00000577085 WBP1LQ9NX94 342 aa19.38■□□□□ 0.69
SF3B3-215ENST00000577085 MYO1BO43795 1136 aa19.37■□□□□ 0.69
SF3B3-215ENST00000577085 AOC2O75106 756 aa19.37■□□□□ 0.69
SF3B3-215ENST00000577085 PDE8BO95263 885 aa19.37■□□□□ 0.69
SF3B3-215ENST00000577085 NF2P35240 595 aa19.37■□□□□ 0.69
SF3B3-215ENST00000577085 RBM5P52756 815 aaKnown RBP eCLIP19.37■□□□□ 0.69
SF3B3-215ENST00000577085 FKBP1AP62942 108 aaKnown RBP19.37■□□□□ 0.69
SF3B3-215ENST00000577085 APOBEC3FQ8IUX4 373 aaKnown RBP19.36■□□□□ 0.69
SF3B3-215ENST00000577085 TNS4Q8IZW8 715 aa19.36■□□□□ 0.69
SF3B3-215ENST00000577085 CERS5Q8N5B7 392 aa19.36■□□□□ 0.69
SF3B3-215ENST00000577085 SCAF8Q9UPN6 1271 aaKnown RBP19.36■□□□□ 0.69
SF3B3-215ENST00000577085 LRRFIP2Q9Y608 721 aaKnown RBP19.36■□□□□ 0.69
SF3B3-215ENST00000577085 EYA2O00167 538 aa19.35■□□□□ 0.69
SF3B3-215ENST00000577085 GNAI3P08754 354 aa19.35■□□□□ 0.69
SF3B3-215ENST00000577085 IFIT1P09914 478 aaKnown RBP19.35■□□□□ 0.69
SF3B3-215ENST00000577085 ZNF157P51786 506 aaPredicted RBP19.35■□□□□ 0.69
SF3B3-215ENST00000577085 NOGQ13253 232 aa19.35■□□□□ 0.69
SF3B3-215ENST00000577085 TTLL12Q14166 644 aaPredicted RBP19.35■□□□□ 0.69
SF3B3-215ENST00000577085 PUM3Q15397 648 aaKnown RBP19.35■□□□□ 0.69
SF3B3-215ENST00000577085 MFSD14BQ5SR56 506 aa19.35■□□□□ 0.69
SF3B3-215ENST00000577085 RGMBQ6NW40 437 aa19.35■□□□□ 0.69
SF3B3-215ENST00000577085 TDRD7Q8NHU6 1098 aaKnown RBP19.35■□□□□ 0.69
SF3B3-215ENST00000577085 CCDC102AQ96A19 550 aa19.35■□□□□ 0.69
SF3B3-215ENST00000577085 FAM84BQ96KN1 310 aaPredicted RBP19.35■□□□□ 0.69
SF3B3-215ENST00000577085 POLR2AP24928 1970 aaKnown RBP19.35■□□□□ 0.69
SF3B3-215ENST00000577085 BCAR3O75815 825 aa19.34■□□□□ 0.69
SF3B3-215ENST00000577085 FKBP1BP68106 108 aa19.34■□□□□ 0.69
SF3B3-215ENST00000577085 INTS3Q68E01 1043 aaKnown RBP19.34■□□□□ 0.69
SF3B3-215ENST00000577085 ATF7IPQ6VMQ6 1270 aa19.34■□□□□ 0.69
SF3B3-215ENST00000577085 SIL1Q9H173 461 aa19.34■□□□□ 0.69
SF3B3-215ENST00000577085 FAM205AQ6ZU69 1335 aa19.33■□□□□ 0.69
SF3B3-215ENST00000577085 ZNF646O15015 1829 aaPredicted RBP19.33■□□□□ 0.69
SF3B3-215ENST00000577085 SLC5A1P13866 664 aa19.33■□□□□ 0.68
SF3B3-215ENST00000577085 CHAF1AQ13111 956 aaPredicted RBP19.33■□□□□ 0.68
SF3B3-215ENST00000577085 MEIS3Q99687 375 aa19.33■□□□□ 0.68
SF3B3-215ENST00000577085 IQSEC3Q9UPP2 1182 aaPredicted RBP19.33■□□□□ 0.68
SF3B3-215ENST00000577085 TRIM27P14373 513 aa19.32■□□□□ 0.68
SF3B3-215ENST00000577085 RFX5P48382 616 aaPredicted RBP19.32■□□□□ 0.68
SF3B3-215ENST00000577085 LBX1P52954 281 aa19.32■□□□□ 0.68
SF3B3-215ENST00000577085 PTPN12Q05209 780 aaKnown RBP19.32■□□□□ 0.68
SF3B3-215ENST00000577085 CFAP100Q494V2 611 aa19.32■□□□□ 0.68
SF3B3-215ENST00000577085 PRAMEF18Q5VWM3 479 aa19.32■□□□□ 0.68
SF3B3-215ENST00000577085 VGLL2Q8N8G2 317 aa19.32■□□□□ 0.68
SF3B3-215ENST00000577085 CLUAP1Q96AJ1 413 aa19.32■□□□□ 0.68
SF3B3-215ENST00000577085 PRDM10Q9NQV6 1147 aa19.32■□□□□ 0.68
SF3B3-215ENST00000577085 FBXO3Q9UK99 471 aa19.32■□□□□ 0.68
SF3B3-215ENST00000577085 TTF2Q9UNY4 1162 aaKnown RBP19.32■□□□□ 0.68
SF3B3-215ENST00000577085 ZKSCAN2Q63HK3 967 aa19.31■□□□□ 0.68
SF3B3-215ENST00000577085 FBXO33Q7Z6M2 555 aa19.31■□□□□ 0.68
SF3B3-215ENST00000577085 MTMR14Q8NCE2 650 aa19.31■□□□□ 0.68
SF3B3-215ENST00000577085 TBC1D22AQ8WUA7 517 aa19.31■□□□□ 0.68
SF3B3-215ENST00000577085 CEP126Q9P2H0 1117 aa19.31■□□□□ 0.68
SF3B3-215ENST00000577085 THSD7BQ9C0I4 1608 aa19.31■□□□□ 0.68
SF3B3-215ENST00000577085 CA12O43570 354 aa19.3■□□□□ 0.68
SF3B3-215ENST00000577085 CIAO1O76071 339 aa19.3■□□□□ 0.68
SF3B3-215ENST00000577085 BCAMP50895 628 aa19.3■□□□□ 0.68
SF3B3-215ENST00000577085 LPIN2Q92539 896 aa19.3■□□□□ 0.68
SF3B3-215ENST00000577085 VEZTQ9HBM0 779 aa19.3■□□□□ 0.68
SF3B3-215ENST00000577085 ZBED9Q6R2W3 1325 aa19.29■□□□□ 0.68
SF3B3-215ENST00000577085 CLRN2A0PK11 232 aa19.29■□□□□ 0.68
SF3B3-215ENST00000577085 SPDYE2BA6NHP3 402 aa19.29■□□□□ 0.68
SF3B3-215ENST00000577085 SRGAP3O43295 1099 aa19.29■□□□□ 0.68
SF3B3-215ENST00000577085 SPDYE6P0CI01 402 aa19.29■□□□□ 0.68
SF3B3-215ENST00000577085 IL15P40933 162 aaPredicted RBP19.29■□□□□ 0.68
SF3B3-215ENST00000577085 FTSJ3Q8IY81 847 aaKnown RBP19.29■□□□□ 0.68
SF3B3-215ENST00000577085 ZBED3Q96IU2 234 aaPredicted RBP19.29■□□□□ 0.68
SF3B3-215ENST00000577085 SERPINA10Q9UK55 444 aa19.29■□□□□ 0.68
SF3B3-215ENST00000577085 PAPPA2Q9BXP8 1791 aa19.29■□□□□ 0.68
SF3B3-215ENST00000577085 HSPA8P11142 646 aaKnown RBP19.28■□□□□ 0.68
SF3B3-215ENST00000577085 ATP2B3Q16720 1220 aa19.28■□□□□ 0.68
SF3B3-215ENST00000577085 ATG9AQ7Z3C6 839 aa19.28■□□□□ 0.68
SF3B3-215ENST00000577085 ARMC9Q7Z3E5 817 aa19.28■□□□□ 0.68
SF3B3-215ENST00000577085 DEFB129Q9H1M3 183 aa19.28■□□□□ 0.68
SF3B3-215ENST00000577085 COL1A1P02452 1464 aaPredicted RBP19.28■□□□□ 0.68
SF3B3-215ENST00000577085 GNAI2P04899 355 aa19.27■□□□□ 0.68
SF3B3-215ENST00000577085 FGFR2P21802 821 aa19.27■□□□□ 0.68
SF3B3-215ENST00000577085 PRKG1Q13976 671 aa19.27■□□□□ 0.68
SF3B3-215ENST00000577085 PRMT6Q96LA8 375 aaPredicted RBP19.27■□□□□ 0.68
SF3B3-215ENST00000577085 GNL3LQ9NVN8 582 aaKnown RBP19.27■□□□□ 0.68
SF3B3-215ENST00000577085 PCDHAC2Q9Y5I4 1007 aa19.27■□□□□ 0.68
SF3B3-215ENST00000577085 PPP2R3BQ9Y5P8 575 aa19.27■□□□□ 0.68
SF3B3-215ENST00000577085 FAM155AB1AL88 458 aaPredicted RBP19.26■□□□□ 0.67
SF3B3-215ENST00000577085 UBE2Q2LH0YL09 131 aa19.26■□□□□ 0.67
SF3B3-215ENST00000577085 SLC10A3P09131 477 aa19.26■□□□□ 0.67
SF3B3-215ENST00000577085 TNFAIP1Q13829 316 aa19.26■□□□□ 0.67
SF3B3-215ENST00000577085 MOB2Q70IA6 237 aa19.26■□□□□ 0.67
SF3B3-215ENST00000577085 COPRSQ9NQ92 184 aa19.26■□□□□ 0.67
SF3B3-215ENST00000577085 TSKSQ9UJT2 592 aa19.26■□□□□ 0.67
SF3B3-215ENST00000577085 PA2G4Q9UQ80 394 aaKnown RBP19.26■□□□□ 0.67
SF3B3-215ENST00000577085 CRKP46108 304 aa19.25■□□□□ 0.67
SF3B3-215ENST00000577085 KIF23Q02241 960 aaPredicted RBP19.25■□□□□ 0.67
SF3B3-215ENST00000577085 SUPT20HL1Q3ZLR7 823 aa19.25■□□□□ 0.67
SF3B3-215ENST00000577085 TEKT1Q969V4 418 aa19.25■□□□□ 0.67
SF3B3-215ENST00000577085 MAST3O60307 1309 aa19.25■□□□□ 0.67
SF3B3-215ENST00000577085 PPP1R12BO60237 982 aaPredicted RBP19.24■□□□□ 0.67
SF3B3-215ENST00000577085 CAPN15O75808 1086 aa19.24■□□□□ 0.67
SF3B3-215ENST00000577085 REM2Q8IYK8 340 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 176.6 ms