RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 DACT2Q5SW24 774 aa17.13■□□□□ 0.33
RPAIN-217ENST00000575711 B4GALNT3Q6L9W6 998 aa17.13■□□□□ 0.33
RPAIN-217ENST00000575711 RSBN1LQ6PCB5 846 aaPredicted RBP17.13■□□□□ 0.33
RPAIN-217ENST00000575711 DENND2AQ9ULE3 1009 aa17.13■□□□□ 0.33
RPAIN-217ENST00000575711 FAM205AQ6ZU69 1335 aa17.13■□□□□ 0.33
RPAIN-217ENST00000575711 ARID4AP29374 1257 aaPredicted RBP17.12■□□□□ 0.33
RPAIN-217ENST00000575711 ZNF526Q8TF50 670 aaPredicted RBP17.12■□□□□ 0.33
RPAIN-217ENST00000575711 CCDC136Q96JN2 1154 aa17.12■□□□□ 0.33
RPAIN-217ENST00000575711 JAG2Q9Y219 1238 aa17.12■□□□□ 0.33
RPAIN-217ENST00000575711 ZBTB12Q9Y330 459 aaPredicted RBP17.12■□□□□ 0.33
RPAIN-217ENST00000575711 MYO3BQ8WXR4 1341 aa17.12■□□□□ 0.33
RPAIN-217ENST00000575711 RPS12P25398 132 aaKnown RBP17.11■□□□□ 0.33
RPAIN-217ENST00000575711 FKBP1AP62942 108 aaKnown RBP17.11■□□□□ 0.33
RPAIN-217ENST00000575711 RASGRF1Q13972 1273 aa17.11■□□□□ 0.33
RPAIN-217ENST00000575711 TBC1D22AQ8WUA7 517 aa17.11■□□□□ 0.33
RPAIN-217ENST00000575711 GPATCH3Q96I76 525 aa17.11■□□□□ 0.33
RPAIN-217ENST00000575711 L3MBTL3Q96JM7 780 aaPredicted RBP17.11■□□□□ 0.33
RPAIN-217ENST00000575711 ZNF512BQ96KM6 892 aaPredicted RBP17.11■□□□□ 0.33
RPAIN-217ENST00000575711 SCN9AQ15858 1988 aa17.11■□□□□ 0.33
RPAIN-217ENST00000575711 LMOD1P29536 600 aaPredicted RBP17.1■□□□□ 0.33
RPAIN-217ENST00000575711 GMPSP49915 693 aaPredicted RBP17.1■□□□□ 0.33
RPAIN-217ENST00000575711 NUCB1Q02818 461 aa17.1■□□□□ 0.33
RPAIN-217ENST00000575711 MFSD14BQ5SR56 506 aa17.1■□□□□ 0.33
RPAIN-217ENST00000575711 CHD1LQ86WJ1 897 aa17.1■□□□□ 0.33
RPAIN-217ENST00000575711 AGBL3Q8NEM8 1001 aa17.1■□□□□ 0.33
RPAIN-217ENST00000575711 WDR66Q8TBY9 1149 aa17.1■□□□□ 0.33
RPAIN-217ENST00000575711 LNPKQ9C0E8 428 aa17.1■□□□□ 0.33
RPAIN-217ENST00000575711 MCAMP43121 646 aa17.09■□□□□ 0.33
RPAIN-217ENST00000575711 SCNN1DP51172 638 aa17.09■□□□□ 0.33
RPAIN-217ENST00000575711 CENPQQ7L2Z9 268 aaPredicted RBP17.09■□□□□ 0.33
RPAIN-217ENST00000575711 SPATA5Q8NB90 893 aa17.09■□□□□ 0.33
RPAIN-217ENST00000575711 DPF2Q92785 391 aa17.09■□□□□ 0.33
RPAIN-217ENST00000575711 MXD3Q9BW11 206 aa17.09■□□□□ 0.33
RPAIN-217ENST00000575711 PPP4R2Q9NY27 417 aa17.09■□□□□ 0.33
RPAIN-217ENST00000575711 HMG20BQ9P0W2 317 aa17.09■□□□□ 0.33
RPAIN-217ENST00000575711 PDS5AQ29RF7 1337 aaKnown RBP17.09■□□□□ 0.33
RPAIN-217ENST00000575711 COL1A1P02452 1464 aaPredicted RBP17.09■□□□□ 0.33
RPAIN-217ENST00000575711 IQCA1LA6NCM1 817 aa17.08■□□□□ 0.32
RPAIN-217ENST00000575711 SCARF1Q14162 830 aa17.08■□□□□ 0.32
RPAIN-217ENST00000575711 C16orf71Q8IYS4 520 aaPredicted RBP17.08■□□□□ 0.32
RPAIN-217ENST00000575711 ZGPATQ8N5A5 531 aaKnown RBP17.08■□□□□ 0.32
RPAIN-217ENST00000575711 GPBP1L1Q9HC44 474 aaPredicted RBP17.08■□□□□ 0.32
RPAIN-217ENST00000575711 ECHDC1Q9NTX5 307 aa17.08■□□□□ 0.32
RPAIN-217ENST00000575711 GPRC5DQ9NZD1 345 aa17.08■□□□□ 0.32
RPAIN-217ENST00000575711 PSME4Q14997 1843 aa17.07■□□□□ 0.32
RPAIN-217ENST00000575711 SALL1Q9NSC2 1324 aa17.07■□□□□ 0.32
RPAIN-217ENST00000575711 PI16Q6UXB8 463 aa17.07■□□□□ 0.32
RPAIN-217ENST00000575711 KIAA0825Q8IV33 1275 aa17.07■□□□□ 0.32
RPAIN-217ENST00000575711 CERS5Q8N5B7 392 aa17.07■□□□□ 0.32
RPAIN-217ENST00000575711 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.07■□□□□ 0.32
RPAIN-217ENST00000575711 GMLQ99445 158 aa17.07■□□□□ 0.32
RPAIN-217ENST00000575711 CNOT7Q9UIV1 285 aaKnown RBP17.07■□□□□ 0.32
RPAIN-217ENST00000575711 HACL1Q9UJ83 578 aa17.07■□□□□ 0.32
RPAIN-217ENST00000575711 TTC41PQ6P2S7 1318 aa17.06■□□□□ 0.32
RPAIN-217ENST00000575711 H7C1D1 291 aa17.06■□□□□ 0.32
RPAIN-217ENST00000575711 USP17L8P0C7I0 530 aa17.06■□□□□ 0.32
RPAIN-217ENST00000575711 VEGFAP15692 232 aaPredicted RBP17.06■□□□□ 0.32
RPAIN-217ENST00000575711 ATP5JP18859 108 aa17.06■□□□□ 0.32
RPAIN-217ENST00000575711 MX1P20591 662 aa17.06■□□□□ 0.32
RPAIN-217ENST00000575711 MICALL2Q8IY33 904 aa17.06■□□□□ 0.32
RPAIN-217ENST00000575711 OGFOD1Q8N543 542 aa17.06■□□□□ 0.32
RPAIN-217ENST00000575711 OTUD7AQ8TE49 926 aaPredicted RBP17.06■□□□□ 0.32
RPAIN-217ENST00000575711 RRAGCQ9HB90 399 aa17.06■□□□□ 0.32
RPAIN-217ENST00000575711 SNRKQ9NRH2 765 aa17.06■□□□□ 0.32
RPAIN-217ENST00000575711 HDAC9Q9UKV0 1011 aa17.06■□□□□ 0.32
RPAIN-217ENST00000575711 SUGT1Q9Y2Z0 365 aa17.06■□□□□ 0.32
RPAIN-217ENST00000575711 WDR90Q96KV7 1748 aa17.06■□□□□ 0.32
RPAIN-217ENST00000575711 F8W031 263 aaPredicted RBP17.05■□□□□ 0.32
RPAIN-217ENST00000575711 ERC2O15083 957 aa17.05■□□□□ 0.32
RPAIN-217ENST00000575711 EPS15P42566 896 aa17.05■□□□□ 0.32
RPAIN-217ENST00000575711 ZAP70P43403 619 aa17.05■□□□□ 0.32
RPAIN-217ENST00000575711 MMP14P50281 582 aa17.05■□□□□ 0.32
RPAIN-217ENST00000575711 ZNF784Q8NCA9 323 aaPredicted RBP17.05■□□□□ 0.32
RPAIN-217ENST00000575711 BOLA2Q9H3K6 86 aa17.05■□□□□ 0.32
RPAIN-217ENST00000575711 NMRK2Q9NPI5 230 aa17.05■□□□□ 0.32
RPAIN-217ENST00000575711 ABCF2Q9UG63 623 aa17.05■□□□□ 0.32
RPAIN-217ENST00000575711 TTF2Q9UNY4 1162 aaKnown RBP17.05■□□□□ 0.32
RPAIN-217ENST00000575711 MYH13Q9UKX3 1938 aa17.04■□□□□ 0.32
RPAIN-217ENST00000575711 SALL3Q9BXA9 1300 aa17.04■□□□□ 0.32
RPAIN-217ENST00000575711 POTECB2RU33 542 aa17.04■□□□□ 0.32
RPAIN-217ENST00000575711 LDHBP07195 334 aaKnown RBP17.04■□□□□ 0.32
RPAIN-217ENST00000575711 EPHX2P34913 555 aa17.04■□□□□ 0.32
RPAIN-217ENST00000575711 SPTY2D1Q68D10 685 aaPredicted RBP17.04■□□□□ 0.32
RPAIN-217ENST00000575711 DNAJC2Q99543 621 aaKnown RBP17.04■□□□□ 0.32
RPAIN-217ENST00000575711 ADARB2Q9NS39 739 aaKnown RBP17.04■□□□□ 0.32
RPAIN-217ENST00000575711 ZNF646O15015 1829 aaPredicted RBP17.04■□□□□ 0.32
RPAIN-217ENST00000575711 MAST3O60307 1309 aa17.03■□□□□ 0.32
RPAIN-217ENST00000575711 GLRX3O76003 335 aaKnown RBP17.03■□□□□ 0.32
RPAIN-217ENST00000575711 ZNF280AP59817 542 aaPredicted RBP17.03■□□□□ 0.32
RPAIN-217ENST00000575711 TSHZ3Q63HK5 1081 aa17.03■□□□□ 0.32
RPAIN-217ENST00000575711 ERICH6Q7L0X2 663 aa17.03■□□□□ 0.32
RPAIN-217ENST00000575711 HAUS7Q99871 368 aa17.03■□□□□ 0.32
RPAIN-217ENST00000575711 TAF1DQ9H5J8 278 aaPredicted RBP17.03■□□□□ 0.32
RPAIN-217ENST00000575711 SHTN1A0MZ66 631 aa17.02■□□□□ 0.32
RPAIN-217ENST00000575711 CYP2E1P05181 493 aaPredicted RBP17.02■□□□□ 0.32
RPAIN-217ENST00000575711 PRDX5P30044 214 aa17.02■□□□□ 0.32
RPAIN-217ENST00000575711 PDE1AP54750 535 aa17.02■□□□□ 0.32
RPAIN-217ENST00000575711 TTF1Q15361 905 aaPredicted RBP17.02■□□□□ 0.32
RPAIN-217ENST00000575711 GRIK5Q16478 980 aa17.02■□□□□ 0.32
RPAIN-217ENST00000575711 TBC1D9Q6ZT07 1266 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms