RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 MAP2K2P36507 400 aa32.64■■■□□ 2.82
NPLOC4-215ENST00000574095 RFX5P48382 616 aaPredicted RBP32.63■■■□□ 2.81
NPLOC4-215ENST00000574095 PRAMEF18Q5VWM3 479 aa32.63■■■□□ 2.81
NPLOC4-215ENST00000574095 TDRD7Q8NHU6 1098 aaKnown RBP32.63■■■□□ 2.81
NPLOC4-215ENST00000574095 KIF16BQ96L93 1317 aa32.62■■■□□ 2.81
NPLOC4-215ENST00000574095 TNS4Q8IZW8 715 aa32.62■■■□□ 2.81
NPLOC4-215ENST00000574095 VGLL2Q8N8G2 317 aa32.62■■■□□ 2.81
NPLOC4-215ENST00000574095 ARHGAP45Q92619 1136 aa32.62■■■□□ 2.81
NPLOC4-215ENST00000574095 ZBED3Q96IU2 234 aaPredicted RBP32.62■■■□□ 2.81
NPLOC4-215ENST00000574095 PDE8BO95263 885 aa32.61■■■□□ 2.81
NPLOC4-215ENST00000574095 FKBP1AP62942 108 aaKnown RBP32.61■■■□□ 2.81
NPLOC4-215ENST00000574095 RGMBQ6NW40 437 aa32.61■■■□□ 2.81
NPLOC4-215ENST00000574095 BCAR3O75815 825 aa32.6■■■□□ 2.81
NPLOC4-215ENST00000574095 LBX1P52954 281 aa32.6■■■□□ 2.81
NPLOC4-215ENST00000574095 DLGAP5Q15398 846 aa32.6■■■□□ 2.81
NPLOC4-215ENST00000574095 FAM205AQ6ZU69 1335 aa32.59■■■□□ 2.81
NPLOC4-215ENST00000574095 HSPA8P11142 646 aaKnown RBP32.59■■■□□ 2.81
NPLOC4-215ENST00000574095 PTPN12Q05209 780 aaKnown RBP32.59■■■□□ 2.81
NPLOC4-215ENST00000574095 ZIC5Q96T25 663 aa32.59■■■□□ 2.81
NPLOC4-215ENST00000574095 BEGAINQ9BUH8 593 aa32.59■■■□□ 2.81
NPLOC4-215ENST00000574095 PCDHAC2Q9Y5I4 1007 aa32.59■■■□□ 2.81
NPLOC4-215ENST00000574095 LRRFIP2Q9Y608 721 aaKnown RBP32.59■■■□□ 2.81
NPLOC4-215ENST00000574095 EYA2O00167 538 aa32.58■■■□□ 2.81
NPLOC4-215ENST00000574095 FBXO33Q7Z6M2 555 aa32.58■■■□□ 2.81
NPLOC4-215ENST00000574095 MEIS3Q99687 375 aa32.58■■■□□ 2.81
NPLOC4-215ENST00000574095 PRDM10Q9NQV6 1147 aa32.58■■■□□ 2.81
NPLOC4-215ENST00000574095 ZNF157P51786 506 aaPredicted RBP32.57■■■□□ 2.8
NPLOC4-215ENST00000574095 INTS3Q68E01 1043 aaKnown RBP32.57■■■□□ 2.8
NPLOC4-215ENST00000574095 VPS37DQ86XT2 251 aa32.57■■■□□ 2.8
NPLOC4-215ENST00000574095 IQSEC3Q9UPP2 1182 aaPredicted RBP32.57■■■□□ 2.8
NPLOC4-215ENST00000574095 NOGQ13253 232 aa32.56■■■□□ 2.8
NPLOC4-215ENST00000574095 CFAP100Q494V2 611 aa32.56■■■□□ 2.8
NPLOC4-215ENST00000574095 MFSD14BQ5SR56 506 aa32.56■■■□□ 2.8
NPLOC4-215ENST00000574095 MTMR14Q8NCE2 650 aa32.56■■■□□ 2.8
NPLOC4-215ENST00000574095 FRAT1Q92837 279 aaPredicted RBP32.56■■■□□ 2.8
NPLOC4-215ENST00000574095 TNNQ9UQP3 1299 aa32.56■■■□□ 2.8
NPLOC4-215ENST00000574095 FAM155AB1AL88 458 aaPredicted RBP32.55■■■□□ 2.8
NPLOC4-215ENST00000574095 CAVIN4Q5BKX8 364 aa32.55■■■□□ 2.8
NPLOC4-215ENST00000574095 MOB2Q70IA6 237 aa32.55■■■□□ 2.8
NPLOC4-215ENST00000574095 APOBEC3FQ8IUX4 373 aaKnown RBP32.55■■■□□ 2.8
NPLOC4-215ENST00000574095 IPO8O15397 1037 aaKnown RBP32.54■■■□□ 2.8
NPLOC4-215ENST00000574095 ATG9AQ7Z3C6 839 aa32.54■■■□□ 2.8
NPLOC4-215ENST00000574095 CCDC102AQ96A19 550 aa32.54■■■□□ 2.8
NPLOC4-215ENST00000574095 SIL1Q9H173 461 aa32.54■■■□□ 2.8
NPLOC4-215ENST00000574095 HDAC5Q9UQL6 1122 aa32.54■■■□□ 2.8
NPLOC4-215ENST00000574095 PAPPA2Q9BXP8 1791 aa32.53■■■□□ 2.8
NPLOC4-215ENST00000574095 TRIM27P14373 513 aa32.53■■■□□ 2.8
NPLOC4-215ENST00000574095 BCAMP50895 628 aa32.53■■■□□ 2.8
NPLOC4-215ENST00000574095 FKBP1BP68106 108 aa32.53■■■□□ 2.8
NPLOC4-215ENST00000574095 PUM3Q15397 648 aaKnown RBP32.53■■■□□ 2.8
NPLOC4-215ENST00000574095 PRMT6Q96LA8 375 aaPredicted RBP32.53■■■□□ 2.8
NPLOC4-215ENST00000574095 ECM29Q5VYK3 1845 aa32.52■■■□□ 2.8
NPLOC4-215ENST00000574095 FGFR2P21802 821 aa32.52■■■□□ 2.8
NPLOC4-215ENST00000574095 RBM5P52756 815 aaKnown RBP eCLIP32.52■■■□□ 2.8
NPLOC4-215ENST00000574095 CHAF1AQ13111 956 aaPredicted RBP32.52■■■□□ 2.8
NPLOC4-215ENST00000574095 ATF7IPQ6VMQ6 1270 aa32.52■■■□□ 2.8
NPLOC4-215ENST00000574095 TSKSQ9UJT2 592 aa32.52■■■□□ 2.8
NPLOC4-215ENST00000574095 FRAT2O75474 233 aaPredicted RBP32.51■■■□□ 2.79
NPLOC4-215ENST00000574095 IFIT1P09914 478 aaKnown RBP32.51■■■□□ 2.79
NPLOC4-215ENST00000574095 TTF2Q9UNY4 1162 aaKnown RBP32.51■■■□□ 2.79
NPLOC4-215ENST00000574095 CLRN2A0PK11 232 aa32.5■■■□□ 2.79
NPLOC4-215ENST00000574095 SPDYE2BA6NHP3 402 aa32.5■■■□□ 2.79
NPLOC4-215ENST00000574095 UBE2Q2LH0YL09 131 aa32.5■■■□□ 2.79
NPLOC4-215ENST00000574095 SPDYE6P0CI01 402 aa32.5■■■□□ 2.79
NPLOC4-215ENST00000574095 TTLL12Q14166 644 aaPredicted RBP32.5■■■□□ 2.79
NPLOC4-215ENST00000574095 CLUAP1Q96AJ1 413 aa32.5■■■□□ 2.79
NPLOC4-215ENST00000574095 PA2G4Q9UQ80 394 aaKnown RBP32.5■■■□□ 2.79
NPLOC4-215ENST00000574095 AOX1Q06278 1338 aa32.5■■■□□ 2.79
NPLOC4-215ENST00000574095 MYO1BO43795 1136 aa32.49■■■□□ 2.79
NPLOC4-215ENST00000574095 SLC10A3P09131 477 aa32.49■■■□□ 2.79
NPLOC4-215ENST00000574095 NF2P35240 595 aa32.49■■■□□ 2.79
NPLOC4-215ENST00000574095 KIF23Q02241 960 aaPredicted RBP32.49■■■□□ 2.79
NPLOC4-215ENST00000574095 ARAP2Q8WZ64 1704 aa32.48■■■□□ 2.79
NPLOC4-215ENST00000574095 GNAI3P08754 354 aa32.48■■■□□ 2.79
NPLOC4-215ENST00000574095 GRIK5Q16478 980 aa32.48■■■□□ 2.79
NPLOC4-215ENST00000574095 DEFB129Q9H1M3 183 aa32.48■■■□□ 2.79
NPLOC4-215ENST00000574095 FBXO3Q9UK99 471 aa32.48■■■□□ 2.79
NPLOC4-215ENST00000574095 CIAO1O76071 339 aa32.47■■■□□ 2.79
NPLOC4-215ENST00000574095 SLC5A1P13866 664 aa32.47■■■□□ 2.79
NPLOC4-215ENST00000574095 LPIN2Q92539 896 aa32.47■■■□□ 2.79
NPLOC4-215ENST00000574095 PRKG1Q13976 671 aa32.46■■■□□ 2.79
NPLOC4-215ENST00000574095 RASAL3Q86YV0 1011 aa32.46■■■□□ 2.79
NPLOC4-215ENST00000574095 VEZTQ9HBM0 779 aa32.46■■■□□ 2.79
NPLOC4-215ENST00000574095 CEP126Q9P2H0 1117 aa32.46■■■□□ 2.79
NPLOC4-215ENST00000574095 SERPINA10Q9UK55 444 aa32.45■■■□□ 2.79
NPLOC4-215ENST00000574095 CA12O43570 354 aa32.44■■■□□ 2.78
NPLOC4-215ENST00000574095 CAPN15O75808 1086 aa32.44■■■□□ 2.78
NPLOC4-215ENST00000574095 ZKSCAN2Q63HK3 967 aa32.44■■■□□ 2.78
NPLOC4-215ENST00000574095 COPRSQ9NQ92 184 aa32.44■■■□□ 2.78
NPLOC4-215ENST00000574095 IL15P40933 162 aaPredicted RBP32.43■■■□□ 2.78
NPLOC4-215ENST00000574095 TBC1D22AQ8WUA7 517 aa32.43■■■□□ 2.78
NPLOC4-215ENST00000574095 COL1A1P02452 1464 aaPredicted RBP32.42■■■□□ 2.78
NPLOC4-215ENST00000574095 CRKP46108 304 aa32.42■■■□□ 2.78
NPLOC4-215ENST00000574095 ATP2B3Q16720 1220 aa32.42■■■□□ 2.78
NPLOC4-215ENST00000574095 TDRD3Q9H7E2 651 aaKnown RBP32.42■■■□□ 2.78
NPLOC4-215ENST00000574095 FZD1Q9UP38 647 aa32.42■■■□□ 2.78
NPLOC4-215ENST00000574095 SRGAP3O43295 1099 aa32.41■■■□□ 2.78
NPLOC4-215ENST00000574095 DZIP1LQ8IYY4 767 aaKnown RBP32.41■■■□□ 2.78
NPLOC4-215ENST00000574095 TMEM57Q8N5G2 664 aa32.41■■■□□ 2.78
NPLOC4-215ENST00000574095 CSRNP1Q96S65 589 aa32.41■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms