RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 SLFN5Q08AF3 891 aa26.63■■□□□ 1.85
CHRNB1-206ENST00000574054 PUS3Q9BZE2 481 aaKnown RBP26.63■■□□□ 1.85
CHRNB1-206ENST00000574054 UTYO14607 1347 aa26.63■■□□□ 1.85
CHRNB1-206ENST00000574054 CASP8AP2Q9UKL3 1982 aa26.62■■□□□ 1.85
CHRNB1-206ENST00000574054 ZBED3Q96IU2 234 aaPredicted RBP26.62■■□□□ 1.85
CHRNB1-206ENST00000574054 SAGE1Q9NXZ1 904 aa26.62■■□□□ 1.85
CHRNB1-206ENST00000574054 TRPA1O75762 1119 aa26.61■■□□□ 1.85
CHRNB1-206ENST00000574054 UBE4AQ14139 1066 aa26.61■■□□□ 1.85
CHRNB1-206ENST00000574054 CSRNP1Q96S65 589 aa26.61■■□□□ 1.85
CHRNB1-206ENST00000574054 PRKG1Q13976 671 aa26.6■■□□□ 1.85
CHRNB1-206ENST00000574054 CDCA7LQ96GN5 454 aa26.6■■□□□ 1.85
CHRNB1-206ENST00000574054 RNF186Q9NXI6 227 aa26.6■■□□□ 1.85
CHRNB1-206ENST00000574054 GYG1P46976 350 aa26.59■■□□□ 1.85
CHRNB1-206ENST00000574054 PCDHAC2Q9Y5I4 1007 aa26.59■■□□□ 1.85
CHRNB1-206ENST00000574054 CCDC85CA6NKD9 419 aa26.58■■□□□ 1.85
CHRNB1-206ENST00000574054 HIBADHP31937 336 aaKnown RBP26.58■■□□□ 1.85
CHRNB1-206ENST00000574054 FKBP1AP62942 108 aaKnown RBP26.58■■□□□ 1.85
CHRNB1-206ENST00000574054 RABL6Q3YEC7 729 aaPredicted RBP26.58■■□□□ 1.85
CHRNB1-206ENST00000574054 CFAP100Q494V2 611 aa26.58■■□□□ 1.85
CHRNB1-206ENST00000574054 ANKRD44Q8N8A2 993 aa26.58■■□□□ 1.85
CHRNB1-206ENST00000574054 MCOLN1Q9GZU1 580 aa26.58■■□□□ 1.85
CHRNB1-206ENST00000574054 SMC4Q9NTJ3 1288 aa26.58■■□□□ 1.85
CHRNB1-206ENST00000574054 MROH5Q6ZUA9 1318 aa26.58■■□□□ 1.85
CHRNB1-206ENST00000574054 RBM5P52756 815 aaKnown RBP eCLIP26.57■■□□□ 1.84
CHRNB1-206ENST00000574054 DGKZQ13574 1117 aa26.57■■□□□ 1.84
CHRNB1-206ENST00000574054 ARMC9Q7Z3E5 817 aa26.57■■□□□ 1.84
CHRNB1-206ENST00000574054 REM2Q8IYK8 340 aaPredicted RBP26.57■■□□□ 1.84
CHRNB1-206ENST00000574054 MTMR14Q8NCE2 650 aa26.57■■□□□ 1.84
CHRNB1-206ENST00000574054 DEFB129Q9H1M3 183 aa26.57■■□□□ 1.84
CHRNB1-206ENST00000574054 RIPOR2Q9Y4F9 1068 aa26.57■■□□□ 1.84
CHRNB1-206ENST00000574054 CLRN2A0PK11 232 aa26.56■■□□□ 1.84
CHRNB1-206ENST00000574054 MYO1BO43795 1136 aa26.56■■□□□ 1.84
CHRNB1-206ENST00000574054 METTL24Q5JXM2 366 aa26.56■■□□□ 1.84
CHRNB1-206ENST00000574054 SPDYE2BA6NHP3 402 aa26.55■■□□□ 1.84
CHRNB1-206ENST00000574054 SPDYE6P0CI01 402 aa26.55■■□□□ 1.84
CHRNB1-206ENST00000574054 MKRN3Q13064 507 aaKnown RBP26.55■■□□□ 1.84
CHRNB1-206ENST00000574054 ALDH1L2Q3SY69 923 aa26.55■■□□□ 1.84
CHRNB1-206ENST00000574054 LRRC24Q50LG9 513 aa26.55■■□□□ 1.84
CHRNB1-206ENST00000574054 MFSD14BQ5SR56 506 aa26.55■■□□□ 1.84
CHRNB1-206ENST00000574054 VPS37DQ86XT2 251 aa26.55■■□□□ 1.84
CHRNB1-206ENST00000574054 TDRD7Q8NHU6 1098 aaKnown RBP26.55■■□□□ 1.84
CHRNB1-206ENST00000574054 FAM84BQ96KN1 310 aaPredicted RBP26.55■■□□□ 1.84
CHRNB1-206ENST00000574054 USP44Q9H0E7 712 aa26.55■■□□□ 1.84
CHRNB1-206ENST00000574054 VEZTQ9HBM0 779 aa26.55■■□□□ 1.84
CHRNB1-206ENST00000574054 FAM205AQ6ZU69 1335 aa26.55■■□□□ 1.84
CHRNB1-206ENST00000574054 AKAP11Q9UKA4 1901 aa26.55■■□□□ 1.84
CHRNB1-206ENST00000574054 PTPN12Q05209 780 aaKnown RBP26.54■■□□□ 1.84
CHRNB1-206ENST00000574054 COL1A1P02452 1464 aaPredicted RBP26.54■■□□□ 1.84
CHRNB1-206ENST00000574054 PRMT6Q96LA8 375 aaPredicted RBP26.53■■□□□ 1.84
CHRNB1-206ENST00000574054 ANGEL1Q9UNK9 670 aaKnown RBP26.53■■□□□ 1.84
CHRNB1-206ENST00000574054 KLHDC4Q8TBB5 520 aa26.52■■□□□ 1.84
CHRNB1-206ENST00000574054 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.52■■□□□ 1.84
CHRNB1-206ENST00000574054 FZD1Q9UP38 647 aa26.52■■□□□ 1.84
CHRNB1-206ENST00000574054 IQSEC3Q9UPP2 1182 aaPredicted RBP26.52■■□□□ 1.84
CHRNB1-206ENST00000574054 AOX1Q06278 1338 aa26.51■■□□□ 1.83
CHRNB1-206ENST00000574054 TTF2Q9UNY4 1162 aaKnown RBP26.51■■□□□ 1.83
CHRNB1-206ENST00000574054 PPP2R3BQ9Y5P8 575 aa26.51■■□□□ 1.83
CHRNB1-206ENST00000574054 FRAT2O75474 233 aaPredicted RBP26.5■■□□□ 1.83
CHRNB1-206ENST00000574054 CHAF1AQ13111 956 aaPredicted RBP26.5■■□□□ 1.83
CHRNB1-206ENST00000574054 CAVIN4Q5BKX8 364 aa26.5■■□□□ 1.83
CHRNB1-206ENST00000574054 FBXO33Q7Z6M2 555 aa26.49■■□□□ 1.83
CHRNB1-206ENST00000574054 TRMT2AQ8IZ69 625 aaKnown RBP26.49■■□□□ 1.83
CHRNB1-206ENST00000574054 CCER2I3L3R5 266 aa26.48■■□□□ 1.83
CHRNB1-206ENST00000574054 PDE8BO95263 885 aa26.48■■□□□ 1.83
CHRNB1-206ENST00000574054 LDLRAD1Q5T700 205 aa26.48■■□□□ 1.83
CHRNB1-206ENST00000574054 SERPINA10Q9UK55 444 aa26.48■■□□□ 1.83
CHRNB1-206ENST00000574054 ECM29Q5VYK3 1845 aa26.47■■□□□ 1.83
CHRNB1-206ENST00000574054 PPP1R12BO60237 982 aaPredicted RBP26.47■■□□□ 1.83
CHRNB1-206ENST00000574054 SUPT20HL1Q3ZLR7 823 aa26.47■■□□□ 1.83
CHRNB1-206ENST00000574054 VGLL2Q8N8G2 317 aa26.47■■□□□ 1.83
CHRNB1-206ENST00000574054 SSC5DA1L4H1 1573 aa26.46■■□□□ 1.83
CHRNB1-206ENST00000574054 CT47B1P0C2W7 299 aaPredicted RBP26.46■■□□□ 1.83
CHRNB1-206ENST00000574054 SREBF2Q12772 1141 aa26.46■■□□□ 1.83
CHRNB1-206ENST00000574054 RASA3Q14644 834 aa26.46■■□□□ 1.83
CHRNB1-206ENST00000574054 SLC10A4Q96EP9 437 aa26.46■■□□□ 1.83
CHRNB1-206ENST00000574054 NOB1Q9ULX3 412 aaKnown RBP26.46■■□□□ 1.83
CHRNB1-206ENST00000574054 TBC1D8O95759 1140 aa26.45■■□□□ 1.82
CHRNB1-206ENST00000574054 UBTFL1P0CB47 393 aaPredicted RBP26.45■■□□□ 1.82
CHRNB1-206ENST00000574054 BCAMP50895 628 aa26.45■■□□□ 1.82
CHRNB1-206ENST00000574054 PUM3Q15397 648 aaKnown RBP26.45■■□□□ 1.82
CHRNB1-206ENST00000574054 NBPF12Q5TAG4 269 aaPredicted RBP26.45■■□□□ 1.82
CHRNB1-206ENST00000574054 SPRYD7Q5W111 196 aa26.45■■□□□ 1.82
CHRNB1-206ENST00000574054 TDRD3Q9H7E2 651 aaKnown RBP26.45■■□□□ 1.82
CHRNB1-206ENST00000574054 ZNF70Q9UC06 446 aaPredicted RBP26.45■■□□□ 1.82
CHRNB1-206ENST00000574054 IFIT1P09914 478 aaKnown RBP26.44■■□□□ 1.82
CHRNB1-206ENST00000574054 CRKP46108 304 aa26.44■■□□□ 1.82
CHRNB1-206ENST00000574054 TM4SF4P48230 202 aa26.44■■□□□ 1.82
CHRNB1-206ENST00000574054 TNFAIP1Q13829 316 aa26.44■■□□□ 1.82
CHRNB1-206ENST00000574054 SPDYE2Q495Y8 402 aa26.44■■□□□ 1.82
CHRNB1-206ENST00000574054 DZIP1LQ8IYY4 767 aaKnown RBP26.44■■□□□ 1.82
CHRNB1-206ENST00000574054 TBC1D22AQ8WUA7 517 aa26.44■■□□□ 1.82
CHRNB1-206ENST00000574054 RFX5P48382 616 aaPredicted RBP26.43■■□□□ 1.82
CHRNB1-206ENST00000574054 GRIK5Q16478 980 aa26.43■■□□□ 1.82
CHRNB1-206ENST00000574054 MAP3K11Q16584 847 aa26.43■■□□□ 1.82
CHRNB1-206ENST00000574054 CLMNQ96JQ2 1002 aa26.43■■□□□ 1.82
CHRNB1-206ENST00000574054 API5Q9BZZ5 524 aaKnown RBP26.43■■□□□ 1.82
CHRNB1-206ENST00000574054 EYA2O00167 538 aa26.42■■□□□ 1.82
CHRNB1-206ENST00000574054 IREB2P48200 963 aaKnown RBP26.42■■□□□ 1.82
CHRNB1-206ENST00000574054 CTU1Q7Z7A3 348 aaKnown RBP26.42■■□□□ 1.82
CHRNB1-206ENST00000574054 ARAP2Q8WZ64 1704 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms