RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 PPP2R3BQ9Y5P8 575 aa15.42■□□□□ 0.06
CCDC40-210ENST00000573903 F8W031 263 aaPredicted RBP15.41■□□□□ 0.06
CCDC40-210ENST00000573903 SNAP23O00161 211 aa15.41■□□□□ 0.06
CCDC40-210ENST00000573903 ALDH1L1O75891 902 aa15.41■□□□□ 0.06
CCDC40-210ENST00000573903 IL1R1P14778 569 aa15.41■□□□□ 0.06
CCDC40-210ENST00000573903 FKBP1AP62942 108 aaKnown RBP15.41■□□□□ 0.06
CCDC40-210ENST00000573903 ZBED3Q96IU2 234 aaPredicted RBP15.41■□□□□ 0.06
CCDC40-210ENST00000573903 SRCIN1Q9C0H9 1055 aa15.41■□□□□ 0.06
CCDC40-210ENST00000573903 ANGEL1Q9UNK9 670 aaKnown RBP15.41■□□□□ 0.06
CCDC40-210ENST00000573903 PPP1R12BO60237 982 aaPredicted RBP15.4■□□□□ 0.06
CCDC40-210ENST00000573903 TM4SF4P48230 202 aa15.4■□□□□ 0.06
CCDC40-210ENST00000573903 RBM5P52756 815 aaKnown RBP eCLIP15.4■□□□□ 0.06
CCDC40-210ENST00000573903 PTPN12Q05209 780 aaKnown RBP15.4■□□□□ 0.06
CCDC40-210ENST00000573903 PKN2Q16513 984 aaKnown RBP15.4■□□□□ 0.06
CCDC40-210ENST00000573903 MTMR14Q8NCE2 650 aa15.4■□□□□ 0.06
CCDC40-210ENST00000573903 ZNF594Q96JF6 807 aaPredicted RBP15.4■□□□□ 0.06
CCDC40-210ENST00000573903 DEFB129Q9H1M3 183 aa15.4■□□□□ 0.06
CCDC40-210ENST00000573903 IRS2Q9Y4H2 1338 aa15.4■□□□□ 0.06
CCDC40-210ENST00000573903 TBC1D8O95759 1140 aa15.39■□□□□ 0.05
CCDC40-210ENST00000573903 CFAP100Q494V2 611 aa15.39■□□□□ 0.05
CCDC40-210ENST00000573903 CERS5Q8N5B7 392 aa15.39■□□□□ 0.05
CCDC40-210ENST00000573903 VEZTQ9HBM0 779 aa15.39■□□□□ 0.05
CCDC40-210ENST00000573903 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
CCDC40-210ENST00000573903 ARAP2Q8WZ64 1704 aa15.38■□□□□ 0.05
CCDC40-210ENST00000573903 SOX10P56693 466 aa15.38■□□□□ 0.05
CCDC40-210ENST00000573903 SUPT20HL1Q3ZLR7 823 aa15.38■□□□□ 0.05
CCDC40-210ENST00000573903 EPHA10Q5JZY3 1008 aa15.38■□□□□ 0.05
CCDC40-210ENST00000573903 ZNF296Q8WUU4 475 aaPredicted RBP15.38■□□□□ 0.05
CCDC40-210ENST00000573903 SLC10A4Q96EP9 437 aa15.38■□□□□ 0.05
CCDC40-210ENST00000573903 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.38■□□□□ 0.05
CCDC40-210ENST00000573903 JAG2Q9Y219 1238 aa15.38■□□□□ 0.05
CCDC40-210ENST00000573903 CLRN2A0PK11 232 aa15.37■□□□□ 0.05
CCDC40-210ENST00000573903 SPDYE2BA6NHP3 402 aa15.37■□□□□ 0.05
CCDC40-210ENST00000573903 MANSC4A6NHS7 340 aaPredicted RBP15.37■□□□□ 0.05
CCDC40-210ENST00000573903 GPR25O00155 361 aa15.37■□□□□ 0.05
CCDC40-210ENST00000573903 ALDH1A1P00352 501 aa15.37■□□□□ 0.05
CCDC40-210ENST00000573903 SPDYE6P0CI01 402 aa15.37■□□□□ 0.05
CCDC40-210ENST00000573903 TNFAIP1Q13829 316 aa15.37■□□□□ 0.05
CCDC40-210ENST00000573903 UBE4AQ14139 1066 aa15.37■□□□□ 0.05
CCDC40-210ENST00000573903 NOM1Q5C9Z4 860 aaKnown RBP15.37■□□□□ 0.05
CCDC40-210ENST00000573903 LDLRAD1Q5T700 205 aa15.37■□□□□ 0.05
CCDC40-210ENST00000573903 SPRYD7Q5W111 196 aa15.37■□□□□ 0.05
CCDC40-210ENST00000573903 ZBTB48P10074 688 aaPredicted RBP15.36■□□□□ 0.05
CCDC40-210ENST00000573903 HIBADHP31937 336 aaKnown RBP15.36■□□□□ 0.05
CCDC40-210ENST00000573903 IREB2P48200 963 aaKnown RBP15.36■□□□□ 0.05
CCDC40-210ENST00000573903 INHBEP58166 350 aa15.36■□□□□ 0.05
CCDC40-210ENST00000573903 MAP3K11Q16584 847 aa15.36■□□□□ 0.05
CCDC40-210ENST00000573903 MFSD14BQ5SR56 506 aa15.36■□□□□ 0.05
CCDC40-210ENST00000573903 MROH5Q6ZUA9 1318 aa15.36■□□□□ 0.05
CCDC40-210ENST00000573903 UNCXA6NJT0 531 aa15.35■□□□□ 0.05
CCDC40-210ENST00000573903 FKTNO75072 461 aa15.35■□□□□ 0.05
CCDC40-210ENST00000573903 VPS37DQ86XT2 251 aa15.35■□□□□ 0.05
CCDC40-210ENST00000573903 SUCLG2Q96I99 432 aa15.35■□□□□ 0.05
CCDC40-210ENST00000573903 PRMT6Q96LA8 375 aaPredicted RBP15.35■□□□□ 0.05
CCDC40-210ENST00000573903 CFHR5Q9BXR6 569 aa15.35■□□□□ 0.05
CCDC40-210ENST00000573903 TTF2Q9UNY4 1162 aaKnown RBP15.35■□□□□ 0.05
CCDC40-210ENST00000573903 FZD1Q9UP38 647 aa15.35■□□□□ 0.05
CCDC40-210ENST00000573903 HPS5Q9UPZ3 1129 aa15.35■□□□□ 0.05
CCDC40-210ENST00000573903 FAM205AQ6ZU69 1335 aa15.35■□□□□ 0.05
CCDC40-210ENST00000573903 SSC5DA1L4H1 1573 aa15.34■□□□□ 0.05
CCDC40-210ENST00000573903 GYG1P46976 350 aa15.34■□□□□ 0.05
CCDC40-210ENST00000573903 TDRD7Q8NHU6 1098 aaKnown RBP15.34■□□□□ 0.05
CCDC40-210ENST00000573903 SERPINA10Q9UK55 444 aa15.34■□□□□ 0.05
CCDC40-210ENST00000573903 PCDHAC2Q9Y5I4 1007 aa15.34■□□□□ 0.05
CCDC40-210ENST00000573903 LAMB1P07942 1786 aa15.34■□□□□ 0.05
CCDC40-210ENST00000573903 FRAT2O75474 233 aaPredicted RBP15.33■□□□□ 0.04
CCDC40-210ENST00000573903 NBPF7P0C2Y1 421 aaPredicted RBP15.33■□□□□ 0.04
CCDC40-210ENST00000573903 RASA3Q14644 834 aa15.33■□□□□ 0.04
CCDC40-210ENST00000573903 CAVIN4Q5BKX8 364 aa15.33■□□□□ 0.04
CCDC40-210ENST00000573903 FBXO46Q6PJ61 603 aaPredicted RBP15.33■□□□□ 0.04
CCDC40-210ENST00000573903 ANKRD13AQ8IZ07 590 aa15.33■□□□□ 0.04
CCDC40-210ENST00000573903 WNK4Q96J92 1243 aa15.33■□□□□ 0.04
CCDC40-210ENST00000573903 PTPRCP08575 1304 aa15.33■□□□□ 0.04
CCDC40-210ENST00000573903 TNNI2P48788 182 aa15.32■□□□□ 0.04
CCDC40-210ENST00000573903 SPDYE2Q495Y8 402 aa15.32■□□□□ 0.04
CCDC40-210ENST00000573903 METTL24Q5JXM2 366 aa15.32■□□□□ 0.04
CCDC40-210ENST00000573903 NBPF12Q5TAG4 269 aaPredicted RBP15.32■□□□□ 0.04
CCDC40-210ENST00000573903 OTUD7BQ6GQQ9 843 aa15.32■□□□□ 0.04
CCDC40-210ENST00000573903 IFNL1Q8IU54 200 aa15.32■□□□□ 0.04
CCDC40-210ENST00000573903 CLMNQ96JQ2 1002 aa15.32■□□□□ 0.04
CCDC40-210ENST00000573903 PUS3Q9BZE2 481 aaKnown RBP15.32■□□□□ 0.04
CCDC40-210ENST00000573903 BICC1Q9H694 974 aaKnown RBP15.32■□□□□ 0.04
CCDC40-210ENST00000573903 UTYO14607 1347 aa15.32■□□□□ 0.04
CCDC40-210ENST00000573903 CCER2I3L3R5 266 aa15.31■□□□□ 0.04
CCDC40-210ENST00000573903 DIEXFQ68CQ4 756 aaKnown RBP15.31■□□□□ 0.04
CCDC40-210ENST00000573903 TBC1D22AQ8WUA7 517 aa15.31■□□□□ 0.04
CCDC40-210ENST00000573903 FAM84BQ96KN1 310 aaPredicted RBP15.31■□□□□ 0.04
CCDC40-210ENST00000573903 TDRD3Q9H7E2 651 aaKnown RBP15.31■□□□□ 0.04
CCDC40-210ENST00000573903 ZNF70Q9UC06 446 aaPredicted RBP15.31■□□□□ 0.04
CCDC40-210ENST00000573903 OTOFQ9HC10 1997 aa15.31■□□□□ 0.04
CCDC40-210ENST00000573903 E9PSI1 815 aa15.3■□□□□ 0.04
CCDC40-210ENST00000573903 CRKP46108 304 aa15.3■□□□□ 0.04
CCDC40-210ENST00000573903 CHAF1AQ13111 956 aaPredicted RBP15.3■□□□□ 0.04
CCDC40-210ENST00000573903 RABL6Q3YEC7 729 aaPredicted RBP15.3■□□□□ 0.04
CCDC40-210ENST00000573903 DZIP1LQ8IYY4 767 aaKnown RBP15.3■□□□□ 0.04
CCDC40-210ENST00000573903 MRPL50Q8N5N7 158 aaKnown RBP15.3■□□□□ 0.04
CCDC40-210ENST00000573903 KAZALD1Q96I82 304 aa15.3■□□□□ 0.04
CCDC40-210ENST00000573903 RIPOR2Q9Y4F9 1068 aa15.3■□□□□ 0.04
CCDC40-210ENST00000573903 AOX1Q06278 1338 aa15.29■□□□□ 0.04
CCDC40-210ENST00000573903 ZNF521Q96K83 1311 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms