RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 EAF2Q96CJ1 260 aaPredicted RBP11.69□□□□□ -0.54
NDE1-208ENST00000573694 IPO9Q96P70 1041 aaKnown RBP11.69□□□□□ -0.54
NDE1-208ENST00000573694 IFIT2P09913 472 aaKnown RBP11.68□□□□□ -0.54
NDE1-208ENST00000573694 IGHMBP2P38935 993 aaKnown RBP11.68□□□□□ -0.54
NDE1-208ENST00000573694 GPSM2P81274 684 aa11.68□□□□□ -0.54
NDE1-208ENST00000573694 TFCP2Q12800 502 aa11.68□□□□□ -0.54
NDE1-208ENST00000573694 MAP1SQ66K74 1059 aaPredicted RBP11.68□□□□□ -0.54
NDE1-208ENST00000573694 ATG9AQ7Z3C6 839 aa11.68□□□□□ -0.54
NDE1-208ENST00000573694 AIDAQ96BJ3 306 aa11.68□□□□□ -0.54
NDE1-208ENST00000573694 CCDC8Q9H0W5 538 aaPredicted RBP11.68□□□□□ -0.54
NDE1-208ENST00000573694 UPF2Q9HAU5 1272 aaKnown RBP11.68□□□□□ -0.54
NDE1-208ENST00000573694 TTC41PQ6P2S7 1318 aa11.67□□□□□ -0.54
NDE1-208ENST00000573694 YDJCA8MPS7 323 aa11.67□□□□□ -0.54
NDE1-208ENST00000573694 CTCFP49711 727 aaPredicted RBP11.67□□□□□ -0.54
NDE1-208ENST00000573694 ZNF280AP59817 542 aaPredicted RBP11.67□□□□□ -0.54
NDE1-208ENST00000573694 LRRC24Q50LG9 513 aa11.67□□□□□ -0.54
NDE1-208ENST00000573694 C15orf52Q6ZUT6 534 aaKnown RBP11.67□□□□□ -0.54
NDE1-208ENST00000573694 RILPL2Q969X0 211 aa11.67□□□□□ -0.54
NDE1-208ENST00000573694 PUS3Q9BZE2 481 aaKnown RBP11.67□□□□□ -0.54
NDE1-208ENST00000573694 COA1Q9GZY4 146 aa11.67□□□□□ -0.54
NDE1-208ENST00000573694 WBP1LQ9NX94 342 aa11.67□□□□□ -0.54
NDE1-208ENST00000573694 TLL2Q9Y6L7 1015 aa11.67□□□□□ -0.54
NDE1-208ENST00000573694 COL4A5P29400 1685 aa11.67□□□□□ -0.54
NDE1-208ENST00000573694 MED23Q9ULK4 1368 aa11.67□□□□□ -0.54
NDE1-208ENST00000573694 MYH7P12883 1935 aa11.66□□□□□ -0.54
NDE1-208ENST00000573694 PITPNM2Q9BZ72 1349 aa11.66□□□□□ -0.54
NDE1-208ENST00000573694 TRIM6-TRIM34B2RNG4 842 aa11.66□□□□□ -0.54
NDE1-208ENST00000573694 ECE2O60344 883 aa11.66□□□□□ -0.54
NDE1-208ENST00000573694 RAD17O75943 681 aa11.66□□□□□ -0.54
NDE1-208ENST00000573694 UFL1O94874 794 aa11.66□□□□□ -0.54
NDE1-208ENST00000573694 HSPA1AP0DMV8 641 aaKnown RBP11.66□□□□□ -0.54
NDE1-208ENST00000573694 HSPA1BP0DMV9 641 aaKnown RBP11.66□□□□□ -0.54
NDE1-208ENST00000573694 FKBP1BP68106 108 aa11.66□□□□□ -0.54
NDE1-208ENST00000573694 TNNI3KQ59H18 835 aa11.66□□□□□ -0.54
NDE1-208ENST00000573694 C22orf23Q9BZE7 217 aa11.66□□□□□ -0.54
NDE1-208ENST00000573694 GREM2Q9H772 168 aa11.66□□□□□ -0.54
NDE1-208ENST00000573694 ECHDC1Q9NTX5 307 aa11.66□□□□□ -0.54
NDE1-208ENST00000573694 MINPP1Q9UNW1 487 aa11.66□□□□□ -0.54
NDE1-208ENST00000573694 FPGT-TNNI3KV9GXZ4 949 aa11.66□□□□□ -0.54
NDE1-208ENST00000573694 WDR33Q9C0J8 1336 aaKnown RBP11.65□□□□□ -0.54
NDE1-208ENST00000573694 USP17L3A6NCW0 530 aa11.65□□□□□ -0.54
NDE1-208ENST00000573694 USP17L4A6NCW7 530 aa11.65□□□□□ -0.54
NDE1-208ENST00000573694 EYA2O00167 538 aa11.65□□□□□ -0.54
NDE1-208ENST00000573694 PSMD14O00487 310 aa11.65□□□□□ -0.54
NDE1-208ENST00000573694 VEGFBP49765 207 aa11.65□□□□□ -0.54
NDE1-208ENST00000573694 CCDC57Q2TAC2 916 aa11.65□□□□□ -0.54
NDE1-208ENST00000573694 STRIP1Q5VSL9 837 aa11.65□□□□□ -0.54
NDE1-208ENST00000573694 USP17L1Q7RTZ2 530 aa11.65□□□□□ -0.54
NDE1-208ENST00000573694 SAPCD2Q86UD0 394 aa11.65□□□□□ -0.54
NDE1-208ENST00000573694 MICALL2Q8IY33 904 aa11.65□□□□□ -0.54
NDE1-208ENST00000573694 DCPSQ96C86 337 aaKnown RBP11.65□□□□□ -0.54
NDE1-208ENST00000573694 GPATCH3Q96I76 525 aa11.65□□□□□ -0.54
NDE1-208ENST00000573694 MPHOSPH8Q99549 860 aa11.65□□□□□ -0.54
NDE1-208ENST00000573694 BEGAINQ9BUH8 593 aa11.65□□□□□ -0.54
NDE1-208ENST00000573694 SEC31BQ9NQW1 1179 aa11.65□□□□□ -0.54
NDE1-208ENST00000573694 DBNLQ9UJU6 430 aaKnown RBP11.65□□□□□ -0.54
NDE1-208ENST00000573694 DUOX1Q9NRD9 1551 aa11.65□□□□□ -0.54
NDE1-208ENST00000573694 MYO5AQ9Y4I1 1855 aaKnown RBP11.65□□□□□ -0.54
NDE1-208ENST00000573694 TRPM7Q96QT4 1865 aa11.64□□□□□ -0.55
NDE1-208ENST00000573694 LTBP1Q14766 1721 aa11.64□□□□□ -0.55
NDE1-208ENST00000573694 ANKRD18BA2A2Z9 1011 aa11.64□□□□□ -0.55
NDE1-208ENST00000573694 GLRX3O76003 335 aaKnown RBP11.64□□□□□ -0.55
NDE1-208ENST00000573694 CIAO1O76071 339 aa11.64□□□□□ -0.55
NDE1-208ENST00000573694 ITGA6P23229 1130 aa11.64□□□□□ -0.55
NDE1-208ENST00000573694 IL15P40933 162 aaPredicted RBP11.64□□□□□ -0.55
NDE1-208ENST00000573694 FKBP1AP62942 108 aaKnown RBP11.64□□□□□ -0.55
NDE1-208ENST00000573694 IFIT5Q13325 482 aaKnown RBP11.64□□□□□ -0.55
NDE1-208ENST00000573694 TAF7LQ5H9L4 462 aa11.64□□□□□ -0.55
NDE1-208ENST00000573694 CST9Q5W186 159 aa11.64□□□□□ -0.55
NDE1-208ENST00000573694 RSBN1LQ6PCB5 846 aaPredicted RBP11.64□□□□□ -0.55
NDE1-208ENST00000573694 OGFOD1Q8N543 542 aa11.64□□□□□ -0.55
NDE1-208ENST00000573694 CCDC102AQ96A19 550 aa11.64□□□□□ -0.55
NDE1-208ENST00000573694 DDRGK1Q96HY6 314 aa11.64□□□□□ -0.55
NDE1-208ENST00000573694 GMLQ99445 158 aa11.64□□□□□ -0.55
NDE1-208ENST00000573694 DBNDD2Q9BQY9 259 aa11.64□□□□□ -0.55
NDE1-208ENST00000573694 MKRN1Q9UHC7 482 aaKnown RBP11.64□□□□□ -0.55
NDE1-208ENST00000573694 ABT1Q9ULW3 272 aaKnown RBP11.64□□□□□ -0.55
NDE1-208ENST00000573694 AKAP11Q9UKA4 1901 aa11.64□□□□□ -0.55
NDE1-208ENST00000573694 UNCXA6NJT0 531 aa11.63□□□□□ -0.55
NDE1-208ENST00000573694 ERC2O15083 957 aa11.63□□□□□ -0.55
NDE1-208ENST00000573694 USP17L8P0C7I0 530 aa11.63□□□□□ -0.55
NDE1-208ENST00000573694 CHMLP26374 656 aa11.63□□□□□ -0.55
NDE1-208ENST00000573694 NOGQ13253 232 aa11.63□□□□□ -0.55
NDE1-208ENST00000573694 CASC1Q6TDU7 716 aa11.63□□□□□ -0.55
NDE1-208ENST00000573694 IL25Q9H293 177 aa11.63□□□□□ -0.55
NDE1-208ENST00000573694 DBNDD1Q9H9R9 158 aa11.63□□□□□ -0.55
NDE1-208ENST00000573694 RIMBP2O15034 1052 aa11.62□□□□□ -0.55
NDE1-208ENST00000573694 RBM25P49756 843 aaKnown RBP11.62□□□□□ -0.55
NDE1-208ENST00000573694 HIRAP54198 1017 aaPredicted RBP11.62□□□□□ -0.55
NDE1-208ENST00000573694 SULF1Q8IWU6 871 aa11.62□□□□□ -0.55
NDE1-208ENST00000573694 C2orf69Q8N8R5 385 aa11.62□□□□□ -0.55
NDE1-208ENST00000573694 CAPNS2Q96L46 248 aa11.62□□□□□ -0.55
NDE1-208ENST00000573694 GPR101Q96P66 508 aaPredicted RBP11.62□□□□□ -0.55
NDE1-208ENST00000573694 ESYT1Q9BSJ8 1104 aa11.62□□□□□ -0.55
NDE1-208ENST00000573694 BOLA2Q9H3K6 86 aa11.62□□□□□ -0.55
NDE1-208ENST00000573694 CELF2O95319 508 aaKnown RBP11.61□□□□□ -0.55
NDE1-208ENST00000573694 SLC4A3P48751 1232 aa11.61□□□□□ -0.55
NDE1-208ENST00000573694 KRT26Q7Z3Y9 468 aa11.61□□□□□ -0.55
NDE1-208ENST00000573694 TNS4Q8IZW8 715 aa11.61□□□□□ -0.55
NDE1-208ENST00000573694 EDC3Q96F86 508 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms