RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 SSH3Q8TE77 659 aa16.78■□□□□ 0.28
RPAIN-213ENST00000573577 MXD3Q9BW11 206 aa16.78■□□□□ 0.28
RPAIN-213ENST00000573577 SIL1Q9H173 461 aa16.78■□□□□ 0.28
RPAIN-213ENST00000573577 HMMRO75330 724 aa16.77■□□□□ 0.28
RPAIN-213ENST00000573577 GYG1P46976 350 aa16.77■□□□□ 0.28
RPAIN-213ENST00000573577 POLA2Q14181 598 aa16.77■□□□□ 0.28
RPAIN-213ENST00000573577 PUM3Q15397 648 aaKnown RBP16.77■□□□□ 0.28
RPAIN-213ENST00000573577 RBM26Q5T8P6 1007 aaKnown RBP16.77■□□□□ 0.28
RPAIN-213ENST00000573577 DNAJC5GQ8N7S2 189 aa16.77■□□□□ 0.28
RPAIN-213ENST00000573577 CREBZFQ9NS37 354 aa16.77■□□□□ 0.28
RPAIN-213ENST00000573577 PA2G4Q9UQ80 394 aaKnown RBP16.77■□□□□ 0.28
RPAIN-213ENST00000573577 HIBADHP31937 336 aaKnown RBP16.76■□□□□ 0.27
RPAIN-213ENST00000573577 G3BP1Q13283 466 aaKnown RBP eCLIP16.76■□□□□ 0.27
RPAIN-213ENST00000573577 FAM84BQ96KN1 310 aaPredicted RBP16.76■□□□□ 0.27
RPAIN-213ENST00000573577 MYOZ2Q9NPC6 264 aa16.76■□□□□ 0.27
RPAIN-213ENST00000573577 CEP126Q9P2H0 1117 aa16.76■□□□□ 0.27
RPAIN-213ENST00000573577 TMEM88BA6NKF7 163 aa16.75■□□□□ 0.27
RPAIN-213ENST00000573577 TRAF5O00463 557 aa16.75■□□□□ 0.27
RPAIN-213ENST00000573577 FGFR2P21802 821 aa16.75■□□□□ 0.27
RPAIN-213ENST00000573577 AAMPQ13685 434 aa16.75■□□□□ 0.27
RPAIN-213ENST00000573577 OGFOD1Q8N543 542 aa16.75■□□□□ 0.27
RPAIN-213ENST00000573577 TDRD7Q8NHU6 1098 aaKnown RBP16.75■□□□□ 0.27
RPAIN-213ENST00000573577 GLIS2Q9BZE0 524 aaPredicted RBP16.75■□□□□ 0.27
RPAIN-213ENST00000573577 SASH1O94885 1247 aa16.74■□□□□ 0.27
RPAIN-213ENST00000573577 IFIT1P09914 478 aaKnown RBP16.74■□□□□ 0.27
RPAIN-213ENST00000573577 MMP14P50281 582 aa16.74■□□□□ 0.27
RPAIN-213ENST00000573577 CAVIN4Q5BKX8 364 aa16.74■□□□□ 0.27
RPAIN-213ENST00000573577 CDC37L1Q7L3B6 337 aa16.74■□□□□ 0.27
RPAIN-213ENST00000573577 FBXO33Q7Z6M2 555 aa16.74■□□□□ 0.27
RPAIN-213ENST00000573577 VPS37DQ86XT2 251 aa16.74■□□□□ 0.27
RPAIN-213ENST00000573577 CERS5Q8N5B7 392 aa16.74■□□□□ 0.27
RPAIN-213ENST00000573577 KLRG1Q96E93 195 aa16.74■□□□□ 0.27
RPAIN-213ENST00000573577 SURF6O75683 361 aaKnown RBP16.73■□□□□ 0.27
RPAIN-213ENST00000573577 SLC5A1P13866 664 aa16.73■□□□□ 0.27
RPAIN-213ENST00000573577 FKBP1AP62942 108 aaKnown RBP16.73■□□□□ 0.27
RPAIN-213ENST00000573577 FMR1Q06787 632 aaKnown RBP eCLIP16.73■□□□□ 0.27
RPAIN-213ENST00000573577 OS9Q13438 667 aaPredicted RBP16.73■□□□□ 0.27
RPAIN-213ENST00000573577 KIAA0825Q8IV33 1275 aa16.73■□□□□ 0.27
RPAIN-213ENST00000573577 LPIN2Q92539 896 aa16.73■□□□□ 0.27
RPAIN-213ENST00000573577 DCPSQ96C86 337 aaKnown RBP16.73■□□□□ 0.27
RPAIN-213ENST00000573577 CRBNQ96SW2 442 aa16.73■□□□□ 0.27
RPAIN-213ENST00000573577 GGA3Q9NZ52 723 aa16.73■□□□□ 0.27
RPAIN-213ENST00000573577 FAM205AQ6ZU69 1335 aa16.72■□□□□ 0.27
RPAIN-213ENST00000573577 SCARF1Q14162 830 aa16.72■□□□□ 0.27
RPAIN-213ENST00000573577 HSP90AB4PQ58FF6 505 aa16.72■□□□□ 0.27
RPAIN-213ENST00000573577 KRT26Q7Z3Y9 468 aa16.72■□□□□ 0.27
RPAIN-213ENST00000573577 HDAC9Q9UKV0 1011 aa16.72■□□□□ 0.27
RPAIN-213ENST00000573577 JAG2Q9Y219 1238 aa16.72■□□□□ 0.27
RPAIN-213ENST00000573577 AKAP2Q9Y2D5 859 aa16.72■□□□□ 0.27
RPAIN-213ENST00000573577 NOP58Q9Y2X3 529 aaKnown RBP16.72■□□□□ 0.27
RPAIN-213ENST00000573577 ASTN2O75129 1339 aaPredicted RBP16.71■□□□□ 0.27
RPAIN-213ENST00000573577 ABCB7O75027 752 aa16.71■□□□□ 0.27
RPAIN-213ENST00000573577 BCAMP50895 628 aa16.71■□□□□ 0.27
RPAIN-213ENST00000573577 ATP2B3Q16720 1220 aa16.71■□□□□ 0.27
RPAIN-213ENST00000573577 USP48Q86UV5 1035 aa16.71■□□□□ 0.27
RPAIN-213ENST00000573577 CENPBP07199 599 aaPredicted RBP16.7■□□□□ 0.26
RPAIN-213ENST00000573577 MFSD14BQ5SR56 506 aa16.7■□□□□ 0.26
RPAIN-213ENST00000573577 ANGEL2Q5VTE6 544 aaKnown RBP16.7■□□□□ 0.26
RPAIN-213ENST00000573577 CST9Q5W186 159 aa16.7■□□□□ 0.26
RPAIN-213ENST00000573577 ERC1Q8IUD2 1116 aa16.7■□□□□ 0.26
RPAIN-213ENST00000573577 IQSEC3Q9UPP2 1182 aaPredicted RBP16.7■□□□□ 0.26
RPAIN-213ENST00000573577 ADM5C9JUS6 153 aa16.69■□□□□ 0.26
RPAIN-213ENST00000573577 WNT10BO00744 389 aa16.69■□□□□ 0.26
RPAIN-213ENST00000573577 FRAT2O75474 233 aaPredicted RBP16.69■□□□□ 0.26
RPAIN-213ENST00000573577 CELF2O95319 508 aaKnown RBP16.69■□□□□ 0.26
RPAIN-213ENST00000573577 NBPF9Q3BBW0 867 aa16.69■□□□□ 0.26
RPAIN-213ENST00000573577 SULF1Q8IWU6 871 aa16.69■□□□□ 0.26
RPAIN-213ENST00000573577 MKRN1Q9UHC7 482 aaKnown RBP16.69■□□□□ 0.26
RPAIN-213ENST00000573577 PITPNM2Q9BZ72 1349 aa16.69■□□□□ 0.26
RPAIN-213ENST00000573577 CNTNAP1P78357 1384 aa16.68■□□□□ 0.26
RPAIN-213ENST00000573577 F8W031 263 aaPredicted RBP16.68■□□□□ 0.26
RPAIN-213ENST00000573577 TFCP2Q12800 502 aa16.68■□□□□ 0.26
RPAIN-213ENST00000573577 SIRT2Q8IXJ6 389 aa16.68■□□□□ 0.26
RPAIN-213ENST00000573577 ABT1Q9ULW3 272 aaKnown RBP16.68■□□□□ 0.26
RPAIN-213ENST00000573577 DSG3P32926 999 aa16.67■□□□□ 0.26
RPAIN-213ENST00000573577 CHAF1AQ13111 956 aaPredicted RBP16.67■□□□□ 0.26
RPAIN-213ENST00000573577 DLK2Q6UY11 383 aa16.67■□□□□ 0.26
RPAIN-213ENST00000573577 JMYQ8N9B5 988 aa16.67■□□□□ 0.26
RPAIN-213ENST00000573577 TBC1D22AQ8WUA7 517 aa16.67■□□□□ 0.26
RPAIN-213ENST00000573577 ZBED3Q96IU2 234 aaPredicted RBP16.67■□□□□ 0.26
RPAIN-213ENST00000573577 ZNF408Q9H9D4 720 aa16.67■□□□□ 0.26
RPAIN-213ENST00000573577 ARAP2Q8WZ64 1704 aa16.67■□□□□ 0.26
RPAIN-213ENST00000573577 TRPM7Q96QT4 1865 aa16.67■□□□□ 0.26
RPAIN-213ENST00000573577 RASSF10A6NK89 507 aa16.66■□□□□ 0.26
RPAIN-213ENST00000573577 RAB11FIP3O75154 756 aa16.66■□□□□ 0.26
RPAIN-213ENST00000573577 DLGAP5Q15398 846 aa16.66■□□□□ 0.26
RPAIN-213ENST00000573577 MTMR14Q8NCE2 650 aa16.66■□□□□ 0.26
RPAIN-213ENST00000573577 GPR108Q9NPR9 543 aa16.66■□□□□ 0.26
RPAIN-213ENST00000573577 GNL3LQ9NVN8 582 aaKnown RBP16.66■□□□□ 0.26
RPAIN-213ENST00000573577 EXOC6BQ9Y2D4 811 aa16.66■□□□□ 0.26
RPAIN-213ENST00000573577 A0A1B0GUL7 405 aa16.65■□□□□ 0.26
RPAIN-213ENST00000573577 ADORA1P30542 326 aa16.65■□□□□ 0.26
RPAIN-213ENST00000573577 DEFB115Q30KQ5 88 aa16.65■□□□□ 0.26
RPAIN-213ENST00000573577 EXOC6Q8TAG9 804 aa16.65■□□□□ 0.26
RPAIN-213ENST00000573577 TTF2Q9UNY4 1162 aaKnown RBP16.65■□□□□ 0.26
RPAIN-213ENST00000573577 TLL2Q9Y6L7 1015 aa16.65■□□□□ 0.26
RPAIN-213ENST00000573577 SPDYE2BA6NHP3 402 aa16.64■□□□□ 0.25
RPAIN-213ENST00000573577 SPDYE6P0CI01 402 aa16.64■□□□□ 0.25
RPAIN-213ENST00000573577 PHKA1P46020 1223 aa16.64■□□□□ 0.25
RPAIN-213ENST00000573577 TIMM10P62072 90 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms