RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 PRAMEF18Q5VWM3 479 aa15.9■□□□□ 0.14
NPLOC4-213ENST00000573519 RGMBQ6NW40 437 aa15.9■□□□□ 0.14
NPLOC4-213ENST00000573519 VPS37DQ86XT2 251 aa15.9■□□□□ 0.14
NPLOC4-213ENST00000573519 CERS5Q8N5B7 392 aa15.9■□□□□ 0.14
NPLOC4-213ENST00000573519 ZNF157P51786 506 aaPredicted RBP15.89■□□□□ 0.13
NPLOC4-213ENST00000573519 LBX1P52954 281 aa15.89■□□□□ 0.13
NPLOC4-213ENST00000573519 BRPF1P55201 1214 aaPredicted RBP15.89■□□□□ 0.13
NPLOC4-213ENST00000573519 DLGAP5Q15398 846 aa15.89■□□□□ 0.13
NPLOC4-213ENST00000573519 FRAT1Q92837 279 aaPredicted RBP15.89■□□□□ 0.13
NPLOC4-213ENST00000573519 FAM84BQ96KN1 310 aaPredicted RBP15.89■□□□□ 0.13
NPLOC4-213ENST00000573519 POLR2AP24928 1970 aaKnown RBP15.88■□□□□ 0.13
NPLOC4-213ENST00000573519 FRAT2O75474 233 aaPredicted RBP15.88■□□□□ 0.13
NPLOC4-213ENST00000573519 PDE8BO95263 885 aa15.88■□□□□ 0.13
NPLOC4-213ENST00000573519 RBM5P52756 815 aaKnown RBP eCLIP15.88■□□□□ 0.13
NPLOC4-213ENST00000573519 CAVIN4Q5BKX8 364 aa15.88■□□□□ 0.13
NPLOC4-213ENST00000573519 IQSEC3Q9UPP2 1182 aaPredicted RBP15.88■□□□□ 0.13
NPLOC4-213ENST00000573519 LRRFIP2Q9Y608 721 aaKnown RBP15.88■□□□□ 0.13
NPLOC4-213ENST00000573519 IPO8O15397 1037 aaKnown RBP15.87■□□□□ 0.13
NPLOC4-213ENST00000573519 BCAR3O75815 825 aa15.87■□□□□ 0.13
NPLOC4-213ENST00000573519 HSPA8P11142 646 aaKnown RBP15.87■□□□□ 0.13
NPLOC4-213ENST00000573519 NF2P35240 595 aa15.87■□□□□ 0.13
NPLOC4-213ENST00000573519 FKBP1AP62942 108 aaKnown RBP15.87■□□□□ 0.13
NPLOC4-213ENST00000573519 NOGQ13253 232 aa15.87■□□□□ 0.13
NPLOC4-213ENST00000573519 TTLL12Q14166 644 aaPredicted RBP15.87■□□□□ 0.13
NPLOC4-213ENST00000573519 CFAP100Q494V2 611 aa15.87■□□□□ 0.13
NPLOC4-213ENST00000573519 MFSD14BQ5SR56 506 aa15.87■□□□□ 0.13
NPLOC4-213ENST00000573519 APOBEC3FQ8IUX4 373 aaKnown RBP15.87■□□□□ 0.13
NPLOC4-213ENST00000573519 TDRD7Q8NHU6 1098 aaKnown RBP15.87■□□□□ 0.13
NPLOC4-213ENST00000573519 ARHGAP45Q92619 1136 aa15.87■□□□□ 0.13
NPLOC4-213ENST00000573519 SIL1Q9H173 461 aa15.87■□□□□ 0.13
NPLOC4-213ENST00000573519 HDAC5Q9UQL6 1122 aa15.87■□□□□ 0.13
NPLOC4-213ENST00000573519 EYA2O00167 538 aa15.86■□□□□ 0.13
NPLOC4-213ENST00000573519 MYO1BO43795 1136 aa15.86■□□□□ 0.13
NPLOC4-213ENST00000573519 CAPN15O75808 1086 aa15.86■□□□□ 0.13
NPLOC4-213ENST00000573519 IFIT1P09914 478 aaKnown RBP15.86■□□□□ 0.13
NPLOC4-213ENST00000573519 RFX5P48382 616 aaPredicted RBP15.86■□□□□ 0.13
NPLOC4-213ENST00000573519 PTPN12Q05209 780 aaKnown RBP15.86■□□□□ 0.13
NPLOC4-213ENST00000573519 CHAF1AQ13111 956 aaPredicted RBP15.86■□□□□ 0.13
NPLOC4-213ENST00000573519 PUM3Q15397 648 aaKnown RBP15.86■□□□□ 0.13
NPLOC4-213ENST00000573519 MOB2Q70IA6 237 aa15.86■□□□□ 0.13
NPLOC4-213ENST00000573519 VGLL2Q8N8G2 317 aa15.86■□□□□ 0.13
NPLOC4-213ENST00000573519 CCDC102AQ96A19 550 aa15.86■□□□□ 0.13
NPLOC4-213ENST00000573519 MEIS3Q99687 375 aa15.86■□□□□ 0.13
NPLOC4-213ENST00000573519 PRDM10Q9NQV6 1147 aa15.86■□□□□ 0.13
NPLOC4-213ENST00000573519 TSKSQ9UJT2 592 aa15.86■□□□□ 0.13
NPLOC4-213ENST00000573519 PCDHAC2Q9Y5I4 1007 aa15.86■□□□□ 0.13
NPLOC4-213ENST00000573519 FAM205AQ6ZU69 1335 aa15.86■□□□□ 0.13
NPLOC4-213ENST00000573519 CLRN2A0PK11 232 aa15.85■□□□□ 0.13
NPLOC4-213ENST00000573519 FKBP1BP68106 108 aa15.85■□□□□ 0.13
NPLOC4-213ENST00000573519 PRKG1Q13976 671 aa15.85■□□□□ 0.13
NPLOC4-213ENST00000573519 CLUAP1Q96AJ1 413 aa15.85■□□□□ 0.13
NPLOC4-213ENST00000573519 ZBED3Q96IU2 234 aaPredicted RBP15.85■□□□□ 0.13
NPLOC4-213ENST00000573519 ZIC5Q96T25 663 aa15.85■□□□□ 0.13
NPLOC4-213ENST00000573519 TTF2Q9UNY4 1162 aaKnown RBP15.85■□□□□ 0.13
NPLOC4-213ENST00000573519 FAM155AB1AL88 458 aaPredicted RBP15.84■□□□□ 0.13
NPLOC4-213ENST00000573519 UBE2Q2LH0YL09 131 aa15.84■□□□□ 0.13
NPLOC4-213ENST00000573519 BCAMP50895 628 aa15.84■□□□□ 0.13
NPLOC4-213ENST00000573519 INTS3Q68E01 1043 aaKnown RBP15.84■□□□□ 0.13
NPLOC4-213ENST00000573519 FBXO33Q7Z6M2 555 aa15.84■□□□□ 0.13
NPLOC4-213ENST00000573519 VEZTQ9HBM0 779 aa15.84■□□□□ 0.13
NPLOC4-213ENST00000573519 TNNQ9UQP3 1299 aa15.84■□□□□ 0.13
NPLOC4-213ENST00000573519 PAPPA2Q9BXP8 1791 aa15.84■□□□□ 0.13
NPLOC4-213ENST00000573519 SPDYE2BA6NHP3 402 aa15.83■□□□□ 0.12
NPLOC4-213ENST00000573519 GNAI3P08754 354 aa15.83■□□□□ 0.12
NPLOC4-213ENST00000573519 SLC10A3P09131 477 aa15.83■□□□□ 0.12
NPLOC4-213ENST00000573519 SPDYE6P0CI01 402 aa15.83■□□□□ 0.12
NPLOC4-213ENST00000573519 SLC5A1P13866 664 aa15.83■□□□□ 0.12
NPLOC4-213ENST00000573519 TRIM27P14373 513 aa15.83■□□□□ 0.12
NPLOC4-213ENST00000573519 KIF23Q02241 960 aaPredicted RBP15.83■□□□□ 0.12
NPLOC4-213ENST00000573519 ATF7IPQ6VMQ6 1270 aa15.83■□□□□ 0.12
NPLOC4-213ENST00000573519 ATG9AQ7Z3C6 839 aa15.83■□□□□ 0.12
NPLOC4-213ENST00000573519 MTMR14Q8NCE2 650 aa15.83■□□□□ 0.12
NPLOC4-213ENST00000573519 PRMT6Q96LA8 375 aaPredicted RBP15.83■□□□□ 0.12
NPLOC4-213ENST00000573519 FGFR2P21802 821 aa15.82■□□□□ 0.12
NPLOC4-213ENST00000573519 LPIN2Q92539 896 aa15.82■□□□□ 0.12
NPLOC4-213ENST00000573519 DEFB129Q9H1M3 183 aa15.82■□□□□ 0.12
NPLOC4-213ENST00000573519 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.82■□□□□ 0.12
NPLOC4-213ENST00000573519 CEP126Q9P2H0 1117 aa15.82■□□□□ 0.12
NPLOC4-213ENST00000573519 PA2G4Q9UQ80 394 aaKnown RBP15.82■□□□□ 0.12
NPLOC4-213ENST00000573519 ZBED9Q6R2W3 1325 aa15.82■□□□□ 0.12
NPLOC4-213ENST00000573519 CA12O43570 354 aa15.81■□□□□ 0.12
NPLOC4-213ENST00000573519 CIAO1O76071 339 aa15.81■□□□□ 0.12
NPLOC4-213ENST00000573519 ZKSCAN2Q63HK3 967 aa15.81■□□□□ 0.12
NPLOC4-213ENST00000573519 ARMC9Q7Z3E5 817 aa15.81■□□□□ 0.12
NPLOC4-213ENST00000573519 RASAL3Q86YV0 1011 aa15.81■□□□□ 0.12
NPLOC4-213ENST00000573519 TBC1D22AQ8WUA7 517 aa15.81■□□□□ 0.12
NPLOC4-213ENST00000573519 COL1A1P02452 1464 aaPredicted RBP15.8■□□□□ 0.12
NPLOC4-213ENST00000573519 AOX1Q06278 1338 aa15.8■□□□□ 0.12
NPLOC4-213ENST00000573519 SRGAP3O43295 1099 aa15.8■□□□□ 0.12
NPLOC4-213ENST00000573519 IL15P40933 162 aaPredicted RBP15.8■□□□□ 0.12
NPLOC4-213ENST00000573519 GRIK5Q16478 980 aa15.8■□□□□ 0.12
NPLOC4-213ENST00000573519 ATP2B3Q16720 1220 aa15.8■□□□□ 0.12
NPLOC4-213ENST00000573519 TDRD3Q9H7E2 651 aaKnown RBP15.8■□□□□ 0.12
NPLOC4-213ENST00000573519 SERPINA10Q9UK55 444 aa15.8■□□□□ 0.12
NPLOC4-213ENST00000573519 FBXO3Q9UK99 471 aa15.8■□□□□ 0.12
NPLOC4-213ENST00000573519 ANGEL1Q9UNK9 670 aaKnown RBP15.8■□□□□ 0.12
NPLOC4-213ENST00000573519 FZD1Q9UP38 647 aa15.8■□□□□ 0.12
NPLOC4-213ENST00000573519 ARAP2Q8WZ64 1704 aa15.8■□□□□ 0.12
NPLOC4-213ENST00000573519 CRKP46108 304 aa15.79■□□□□ 0.12
NPLOC4-213ENST00000573519 PPP2R3BQ9Y5P8 575 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms