RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 ARID4AP29374 1257 aaPredicted RBP28.51■■■□□ 2.15
TVP23A-206ENST00000572980 GPATCH3Q96I76 525 aa28.51■■■□□ 2.15
TVP23A-206ENST00000572980 GJA3Q9Y6H8 435 aa28.51■■■□□ 2.15
TVP23A-206ENST00000572980 SCN9AQ15858 1988 aa28.51■■■□□ 2.15
TVP23A-206ENST00000572980 GLTPD2A6NH11 291 aa28.5■■■□□ 2.15
TVP23A-206ENST00000572980 C16orf71Q8IYS4 520 aaPredicted RBP28.5■■■□□ 2.15
TVP23A-206ENST00000572980 FAM205AQ6ZU69 1335 aa28.5■■■□□ 2.15
TVP23A-206ENST00000572980 VIL1P09327 827 aaKnown RBP28.5■■■□□ 2.15
TVP23A-206ENST00000572980 CHAF1AQ13111 956 aaPredicted RBP28.49■■■□□ 2.15
TVP23A-206ENST00000572980 RASGRF1Q13972 1273 aa28.49■■■□□ 2.15
TVP23A-206ENST00000572980 DDNO94850 711 aaPredicted RBP28.48■■■□□ 2.15
TVP23A-206ENST00000572980 DACT2Q5SW24 774 aa28.48■■■□□ 2.15
TVP23A-206ENST00000572980 WDR66Q8TBY9 1149 aa28.48■■■□□ 2.15
TVP23A-206ENST00000572980 ECHDC1Q9NTX5 307 aa28.48■■■□□ 2.15
TVP23A-206ENST00000572980 PDS5AQ29RF7 1337 aaKnown RBP28.47■■■□□ 2.15
TVP23A-206ENST00000572980 RSBN1LQ6PCB5 846 aaPredicted RBP28.47■■■□□ 2.15
TVP23A-206ENST00000572980 SPATA5Q8NB90 893 aa28.47■■■□□ 2.15
TVP23A-206ENST00000572980 TBC1D22AQ8WUA7 517 aa28.47■■■□□ 2.15
TVP23A-206ENST00000572980 JAG2Q9Y219 1238 aa28.47■■■□□ 2.15
TVP23A-206ENST00000572980 PSME4Q14997 1843 aa28.47■■■□□ 2.15
TVP23A-206ENST00000572980 MYH13Q9UKX3 1938 aa28.47■■■□□ 2.15
TVP23A-206ENST00000572980 MYO3BQ8WXR4 1341 aa28.46■■■□□ 2.15
TVP23A-206ENST00000572980 FKBP1AP62942 108 aaKnown RBP28.46■■■□□ 2.15
TVP23A-206ENST00000572980 HMG20BQ9P0W2 317 aa28.46■■■□□ 2.15
TVP23A-206ENST00000572980 MX1P20591 662 aa28.45■■■□□ 2.15
TVP23A-206ENST00000572980 RPS12P25398 132 aaKnown RBP28.45■■■□□ 2.15
TVP23A-206ENST00000572980 MCAMP43121 646 aa28.45■■■□□ 2.15
TVP23A-206ENST00000572980 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.45■■■□□ 2.15
TVP23A-206ENST00000572980 TTC41PQ6P2S7 1318 aa28.45■■■□□ 2.14
TVP23A-206ENST00000572980 ATP5JP18859 108 aa28.45■■■□□ 2.14
TVP23A-206ENST00000572980 MFSD14BQ5SR56 506 aa28.45■■■□□ 2.14
TVP23A-206ENST00000572980 AGBL3Q8NEM8 1001 aa28.45■■■□□ 2.14
TVP23A-206ENST00000572980 SCARF1Q14162 830 aa28.44■■■□□ 2.14
TVP23A-206ENST00000572980 OTUD7AQ8TE49 926 aaPredicted RBP28.44■■■□□ 2.14
TVP23A-206ENST00000572980 ZBTB12Q9Y330 459 aaPredicted RBP28.44■■■□□ 2.14
TVP23A-206ENST00000572980 ZGPATQ8N5A5 531 aaKnown RBP28.43■■■□□ 2.14
TVP23A-206ENST00000572980 COL1A1P02452 1464 aaPredicted RBP28.42■■■□□ 2.14
TVP23A-206ENST00000572980 ERC2O15083 957 aa28.42■■■□□ 2.14
TVP23A-206ENST00000572980 DPF2Q92785 391 aa28.42■■■□□ 2.14
TVP23A-206ENST00000572980 MXD3Q9BW11 206 aa28.42■■■□□ 2.14
TVP23A-206ENST00000572980 SNRKQ9NRH2 765 aa28.42■■■□□ 2.14
TVP23A-206ENST00000572980 SALL3Q9BXA9 1300 aa28.42■■■□□ 2.14
TVP23A-206ENST00000572980 GMPSP49915 693 aaPredicted RBP28.41■■■□□ 2.14
TVP23A-206ENST00000572980 PI16Q6UXB8 463 aa28.41■■■□□ 2.14
TVP23A-206ENST00000572980 SALL1Q9NSC2 1324 aa28.41■■■□□ 2.14
TVP23A-206ENST00000572980 YY1P25490 414 aa28.41■■■□□ 2.14
TVP23A-206ENST00000572980 CERS5Q8N5B7 392 aa28.41■■■□□ 2.14
TVP23A-206ENST00000572980 L3MBTL3Q96JM7 780 aaPredicted RBP28.41■■■□□ 2.14
TVP23A-206ENST00000572980 BOLA2Q9H3K6 86 aa28.41■■■□□ 2.14
TVP23A-206ENST00000572980 STAP2Q9UGK3 403 aa28.41■■■□□ 2.14
TVP23A-206ENST00000572980 ZAP70P43403 619 aa28.4■■■□□ 2.14
TVP23A-206ENST00000572980 PDE1AP54750 535 aa28.4■■■□□ 2.14
TVP23A-206ENST00000572980 GMLQ99445 158 aa28.4■■■□□ 2.14
TVP23A-206ENST00000572980 SUGT1Q9Y2Z0 365 aa28.4■■■□□ 2.14
TVP23A-206ENST00000572980 ZNF646O15015 1829 aaPredicted RBP28.39■■■□□ 2.14
TVP23A-206ENST00000572980 GLRX3O76003 335 aaKnown RBP28.39■■■□□ 2.14
TVP23A-206ENST00000572980 LMOD1P29536 600 aaPredicted RBP28.39■■■□□ 2.14
TVP23A-206ENST00000572980 ABCF2Q9UG63 623 aa28.39■■■□□ 2.14
TVP23A-206ENST00000572980 AKAP11Q9UKA4 1901 aa28.39■■■□□ 2.13
TVP23A-206ENST00000572980 TSHZ3Q63HK5 1081 aa28.38■■■□□ 2.13
TVP23A-206ENST00000572980 SPTY2D1Q68D10 685 aaPredicted RBP28.38■■■□□ 2.13
TVP23A-206ENST00000572980 OGFOD1Q8N543 542 aa28.38■■■□□ 2.13
TVP23A-206ENST00000572980 USP17L8P0C7I0 530 aa28.37■■■□□ 2.13
TVP23A-206ENST00000572980 MMP14P50281 582 aa28.37■■■□□ 2.13
TVP23A-206ENST00000572980 SCNN1DP51172 638 aa28.37■■■□□ 2.13
TVP23A-206ENST00000572980 KIAA0825Q8IV33 1275 aa28.37■■■□□ 2.13
TVP23A-206ENST00000572980 PLEKHM2Q8IWE5 1019 aa28.37■■■□□ 2.13
TVP23A-206ENST00000572980 DNAJC2Q99543 621 aaKnown RBP28.37■■■□□ 2.13
TVP23A-206ENST00000572980 HAUS7Q99871 368 aa28.37■■■□□ 2.13
TVP23A-206ENST00000572980 GPRC5DQ9NZD1 345 aa28.37■■■□□ 2.13
TVP23A-206ENST00000572980 CNOT7Q9UIV1 285 aaKnown RBP28.37■■■□□ 2.13
TVP23A-206ENST00000572980 IQCA1LA6NCM1 817 aa28.37■■■□□ 2.13
TVP23A-206ENST00000572980 CYP2E1P05181 493 aaPredicted RBP28.37■■■□□ 2.13
TVP23A-206ENST00000572980 ZNF526Q8TF50 670 aaPredicted RBP28.37■■■□□ 2.13
TVP23A-206ENST00000572980 HDAC9Q9UKV0 1011 aa28.37■■■□□ 2.13
TVP23A-206ENST00000572980 LDHBP07195 334 aaKnown RBP28.36■■■□□ 2.13
TVP23A-206ENST00000572980 TTF1Q15361 905 aaPredicted RBP28.36■■■□□ 2.13
TVP23A-206ENST00000572980 PI4K2BQ8TCG2 481 aa28.36■■■□□ 2.13
TVP23A-206ENST00000572980 AOX1Q06278 1338 aa28.35■■■□□ 2.13
TVP23A-206ENST00000572980 H7C1D1 291 aa28.35■■■□□ 2.13
TVP23A-206ENST00000572980 PDE4AP27815 886 aa28.35■■■□□ 2.13
TVP23A-206ENST00000572980 TBC1D9Q6ZT07 1266 aa28.35■■■□□ 2.13
TVP23A-206ENST00000572980 MICALL2Q8IY33 904 aa28.35■■■□□ 2.13
TVP23A-206ENST00000572980 OSBPL3Q9H4L5 887 aa28.35■■■□□ 2.13
TVP23A-206ENST00000572980 LRP2BPQ9P2M1 347 aa28.35■■■□□ 2.13
TVP23A-206ENST00000572980 HACL1Q9UJ83 578 aa28.35■■■□□ 2.13
TVP23A-206ENST00000572980 TTF2Q9UNY4 1162 aaKnown RBP28.35■■■□□ 2.13
TVP23A-206ENST00000572980 NDUFB9Q9Y6M9 179 aa28.35■■■□□ 2.13
TVP23A-206ENST00000572980 WDR90Q96KV7 1748 aa28.34■■■□□ 2.13
TVP23A-206ENST00000572980 F8W031 263 aaPredicted RBP28.34■■■□□ 2.13
TVP23A-206ENST00000572980 ERICH6Q7L0X2 663 aa28.34■■■□□ 2.13
TVP23A-206ENST00000572980 PAG1Q9NWQ8 432 aa28.34■■■□□ 2.13
TVP23A-206ENST00000572980 MAST3O60307 1309 aa28.34■■■□□ 2.13
TVP23A-206ENST00000572980 PRDX5P30044 214 aa28.33■■■□□ 2.13
TVP23A-206ENST00000572980 GOLIM4O00461 696 aa28.33■■■□□ 2.12
TVP23A-206ENST00000572980 IGSF3O75054 1194 aa28.33■■■□□ 2.12
TVP23A-206ENST00000572980 VEGFAP15692 232 aaPredicted RBP28.33■■■□□ 2.12
TVP23A-206ENST00000572980 GRIK5Q16478 980 aa28.33■■■□□ 2.12
TVP23A-206ENST00000572980 RRAGCQ9HB90 399 aa28.33■■■□□ 2.12
TVP23A-206ENST00000572980 SCN4AP35499 1836 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms