RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 ATG9AQ7Z3C6 839 aa18.88■□□□□ 0.61
RAB40B-206ENST00000571995 UTP14AQ9BVJ6 771 aaKnown RBP18.88■□□□□ 0.61
RAB40B-206ENST00000571995 TEX13AQ9BXU3 409 aaPredicted RBP18.88■□□□□ 0.61
RAB40B-206ENST00000571995 TM6SF1Q9BZW5 370 aa18.88■□□□□ 0.61
RAB40B-206ENST00000571995 PRKAB2O43741 272 aa18.88■□□□□ 0.61
RAB40B-206ENST00000571995 DHX8Q14562 1220 aaKnown RBP18.88■□□□□ 0.61
RAB40B-206ENST00000571995 ZSCAN25Q6NSZ9 544 aa18.88■□□□□ 0.61
RAB40B-206ENST00000571995 RPAP1Q9BWH6 1393 aaPredicted RBP18.88■□□□□ 0.61
RAB40B-206ENST00000571995 LMTK3Q96Q04 1460 aa18.88■□□□□ 0.61
RAB40B-206ENST00000571995 HMGB1P09429 215 aaKnown RBP18.88■□□□□ 0.61
RAB40B-206ENST00000571995 IARSP41252 1262 aaKnown RBP18.88■□□□□ 0.61
RAB40B-206ENST00000571995 UBR1Q8IWV7 1749 aa18.87■□□□□ 0.61
RAB40B-206ENST00000571995 H7C1W4 665 aa18.87■□□□□ 0.61
RAB40B-206ENST00000571995 ATG3Q9NT62 314 aa18.87■□□□□ 0.61
RAB40B-206ENST00000571995 NRBP1Q9UHY1 535 aa18.87■□□□□ 0.61
RAB40B-206ENST00000571995 MFSD6Q6ZSS7 791 aa18.87■□□□□ 0.61
RAB40B-206ENST00000571995 TRIM22Q8IYM9 498 aa18.87■□□□□ 0.61
RAB40B-206ENST00000571995 AOPEPQ8N6M6 819 aa18.87■□□□□ 0.61
RAB40B-206ENST00000571995 CARD10Q9BWT7 1032 aa18.87■□□□□ 0.61
RAB40B-206ENST00000571995 NRDCO43847 1150 aa18.87■□□□□ 0.61
RAB40B-206ENST00000571995 VAT1LQ9HCJ6 419 aa18.87■□□□□ 0.61
RAB40B-206ENST00000571995 GNL3LQ9NVN8 582 aaKnown RBP18.87■□□□□ 0.61
RAB40B-206ENST00000571995 GNPATO15228 680 aa18.86■□□□□ 0.61
RAB40B-206ENST00000571995 HMGN5P82970 282 aaKnown RBP18.86■□□□□ 0.61
RAB40B-206ENST00000571995 SH3TC1Q8TE82 1336 aa18.86■□□□□ 0.61
RAB40B-206ENST00000571995 TPM4P67936 248 aa18.86■□□□□ 0.61
RAB40B-206ENST00000571995 CCDC102BQ68D86 513 aa18.86■□□□□ 0.61
RAB40B-206ENST00000571995 PRDM10Q9NQV6 1147 aa18.86■□□□□ 0.61
RAB40B-206ENST00000571995 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.86■□□□□ 0.61
RAB40B-206ENST00000571995 V9GYY5 206 aaPredicted RBP18.86■□□□□ 0.61
RAB40B-206ENST00000571995 RFX5P48382 616 aaPredicted RBP18.86■□□□□ 0.61
RAB40B-206ENST00000571995 CAVIN4Q5BKX8 364 aa18.86■□□□□ 0.61
RAB40B-206ENST00000571995 KLHL34Q8N239 644 aa18.86■□□□□ 0.61
RAB40B-206ENST00000571995 CBX8Q9HC52 389 aa18.86■□□□□ 0.61
RAB40B-206ENST00000571995 ST3GAL1Q11201 340 aa18.85■□□□□ 0.61
RAB40B-206ENST00000571995 FAM200AQ8TCP9 573 aa18.85■□□□□ 0.61
RAB40B-206ENST00000571995 KDM6AO15550 1401 aaPredicted RBP18.85■□□□□ 0.61
RAB40B-206ENST00000571995 ZBTB43O43298 467 aa18.85■□□□□ 0.61
RAB40B-206ENST00000571995 SERPINC1P01008 464 aa18.85■□□□□ 0.61
RAB40B-206ENST00000571995 LMOD1P29536 600 aaPredicted RBP18.85■□□□□ 0.61
RAB40B-206ENST00000571995 NOLC1Q14978 699 aaKnown RBP eCLIP18.85■□□□□ 0.61
RAB40B-206ENST00000571995 UIMC1Q96RL1 719 aa18.85■□□□□ 0.61
RAB40B-206ENST00000571995 PPP1R9BQ96SB3 815 aa18.85■□□□□ 0.61
RAB40B-206ENST00000571995 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.85■□□□□ 0.61
RAB40B-206ENST00000571995 KCNJ14Q9UNX9 436 aa18.85■□□□□ 0.61
RAB40B-206ENST00000571995 KNDC1Q76NI1 1749 aa18.85■□□□□ 0.61
RAB40B-206ENST00000571995 MARCH6O60337 910 aa18.85■□□□□ 0.61
RAB40B-206ENST00000571995 CTSWP56202 376 aa18.84■□□□□ 0.61
RAB40B-206ENST00000571995 CCDC152Q4G0S7 254 aa18.84■□□□□ 0.61
RAB40B-206ENST00000571995 CYP2D7A0A087X1C5 515 aa18.84■□□□□ 0.61
RAB40B-206ENST00000571995 PDIA3P30101 505 aaKnown RBP18.84■□□□□ 0.61
RAB40B-206ENST00000571995 NLRP10Q86W26 655 aa18.84■□□□□ 0.61
RAB40B-206ENST00000571995 NOL10Q9BSC4 688 aaKnown RBP18.84■□□□□ 0.61
RAB40B-206ENST00000571995 DDX19AQ9NUU7 478 aaKnown RBP18.84■□□□□ 0.61
RAB40B-206ENST00000571995 NOL7Q9UMY1 257 aaKnown RBP18.84■□□□□ 0.61
RAB40B-206ENST00000571995 ANKRD18AQ8IVF6 992 aa18.84■□□□□ 0.61
RAB40B-206ENST00000571995 APPBP2Q92624 585 aa18.84■□□□□ 0.61
RAB40B-206ENST00000571995 HELLSQ9NRZ9 838 aa18.84■□□□□ 0.61
RAB40B-206ENST00000571995 MCAMP43121 646 aa18.83■□□□□ 0.61
RAB40B-206ENST00000571995 ZBTB38Q8NAP3 1195 aaPredicted RBP18.83■□□□□ 0.61
RAB40B-206ENST00000571995 GIGYF2Q6Y7W6 1299 aaKnown RBP18.83■□□□□ 0.61
RAB40B-206ENST00000571995 CEP57L1Q8IYX8 460 aa18.83■□□□□ 0.61
RAB40B-206ENST00000571995 ZNF609O15014 1411 aa18.83■□□□□ 0.6
RAB40B-206ENST00000571995 C3P01024 1663 aa18.83■□□□□ 0.6
RAB40B-206ENST00000571995 CRKLP46109 303 aaKnown RBP18.83■□□□□ 0.6
RAB40B-206ENST00000571995 ZMYM1Q5SVZ6 1142 aa18.83■□□□□ 0.6
RAB40B-206ENST00000571995 PIH1D3Q9NQM4 214 aaKnown RBP18.83■□□□□ 0.6
RAB40B-206ENST00000571995 DZIP1Q86YF9 867 aaKnown RBP18.82■□□□□ 0.6
RAB40B-206ENST00000571995 NSUN7Q8NE18 718 aaKnown RBP18.82■□□□□ 0.6
RAB40B-206ENST00000571995 GPR101Q96P66 508 aaPredicted RBP18.82■□□□□ 0.6
RAB40B-206ENST00000571995 STX8Q9UNK0 236 aa18.82■□□□□ 0.6
RAB40B-206ENST00000571995 LOC102724428A0A0B4J2F2 783 aa18.82■□□□□ 0.6
RAB40B-206ENST00000571995 UBE2Q2LH0YL09 131 aa18.82■□□□□ 0.6
RAB40B-206ENST00000571995 C6orf229H3BNL8 230 aa18.82■□□□□ 0.6
RAB40B-206ENST00000571995 USP5P45974 858 aa18.82■□□□□ 0.6
RAB40B-206ENST00000571995 SIK1P57059 783 aa18.82■□□□□ 0.6
RAB40B-206ENST00000571995 TTLL11Q8NHH1 800 aa18.82■□□□□ 0.6
RAB40B-206ENST00000571995 CLIC4Q9Y696 253 aa18.82■□□□□ 0.6
RAB40B-206ENST00000571995 ANKRD26Q9UPS8 1709 aa18.82■□□□□ 0.6
RAB40B-206ENST00000571995 PDE8AO60658 829 aa18.81■□□□□ 0.6
RAB40B-206ENST00000571995 BAZ2BQ9UIF8 2168 aaKnown RBP18.81■□□□□ 0.6
RAB40B-206ENST00000571995 SUSD4Q5VX71 490 aa18.81■□□□□ 0.6
RAB40B-206ENST00000571995 SRP68Q9UHB9 627 aaKnown RBP18.81■□□□□ 0.6
RAB40B-206ENST00000571995 ZNF652Q9Y2D9 606 aa18.81■□□□□ 0.6
RAB40B-206ENST00000571995 SLC3A2P08195 630 aaKnown RBP18.81■□□□□ 0.6
RAB40B-206ENST00000571995 CPLX3Q8WVH0 158 aa18.81■□□□□ 0.6
RAB40B-206ENST00000571995 STAMQ92783 540 aa18.81■□□□□ 0.6
RAB40B-206ENST00000571995 PGBD1Q96JS3 809 aa18.81■□□□□ 0.6
RAB40B-206ENST00000571995 SETDB2Q96T68 719 aa18.81■□□□□ 0.6
RAB40B-206ENST00000571995 PDE6AP16499 860 aa18.8■□□□□ 0.6
RAB40B-206ENST00000571995 CCDC87Q9NVE4 849 aa18.8■□□□□ 0.6
RAB40B-206ENST00000571995 MAP3K15Q6ZN16 1313 aa18.8■□□□□ 0.6
RAB40B-206ENST00000571995 WTIPA6NIX2 430 aaPredicted RBP18.8■□□□□ 0.6
RAB40B-206ENST00000571995 AFMP43652 599 aa18.8■□□□□ 0.6
RAB40B-206ENST00000571995 PYCARDQ9ULZ3 195 aa18.8■□□□□ 0.6
RAB40B-206ENST00000571995 SPTLC2O15270 562 aa18.8■□□□□ 0.6
RAB40B-206ENST00000571995 OFD1O75665 1012 aa18.8■□□□□ 0.6
RAB40B-206ENST00000571995 WTAPQ15007 396 aa18.8■□□□□ 0.6
RAB40B-206ENST00000571995 CFAP100Q494V2 611 aa18.8■□□□□ 0.6
RAB40B-206ENST00000571995 CLIC6Q96NY7 704 aa18.8■□□□□ 0.6
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