RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 SPEF2Q9C093 1822 aa22.27■■□□□ 1.15
CIITA-206ENST00000571190 MYH3P11055 1940 aa22.26■■□□□ 1.15
CIITA-206ENST00000571190 FKBP1AP62942 108 aaKnown RBP22.26■■□□□ 1.15
CIITA-206ENST00000571190 MKRN3Q13064 507 aaKnown RBP22.26■■□□□ 1.15
CIITA-206ENST00000571190 SLC4A10Q6U841 1118 aa22.26■■□□□ 1.15
CIITA-206ENST00000571190 ZNF804AQ7Z570 1209 aa22.26■■□□□ 1.15
CIITA-206ENST00000571190 SUCLG2Q96I99 432 aa22.26■■□□□ 1.15
CIITA-206ENST00000571190 DEFB129Q9H1M3 183 aa22.26■■□□□ 1.15
CIITA-206ENST00000571190 JAG2Q9Y219 1238 aa22.26■■□□□ 1.15
CIITA-206ENST00000571190 F8W031 263 aaPredicted RBP22.25■■□□□ 1.15
CIITA-206ENST00000571190 PLIN1O60240 522 aa22.25■■□□□ 1.15
CIITA-206ENST00000571190 TBC1D8O95759 1140 aa22.25■■□□□ 1.15
CIITA-206ENST00000571190 ARMC9Q7Z3E5 817 aa22.25■■□□□ 1.15
CIITA-206ENST00000571190 CTU1Q7Z7A3 348 aaKnown RBP22.25■■□□□ 1.15
CIITA-206ENST00000571190 PUS3Q9BZE2 481 aaKnown RBP22.25■■□□□ 1.15
CIITA-206ENST00000571190 SRCIN1Q9C0H9 1055 aa22.25■■□□□ 1.15
CIITA-206ENST00000571190 C9orf78Q9NZ63 289 aaPredicted RBP22.25■■□□□ 1.15
CIITA-206ENST00000571190 SPDYE2BA6NHP3 402 aa22.24■■□□□ 1.15
CIITA-206ENST00000571190 SPDYE6P0CI01 402 aa22.24■■□□□ 1.15
CIITA-206ENST00000571190 CFAP100Q494V2 611 aa22.24■■□□□ 1.15
CIITA-206ENST00000571190 PRMT6Q96LA8 375 aaPredicted RBP22.24■■□□□ 1.15
CIITA-206ENST00000571190 CNNM1Q9NRU3 951 aa22.24■■□□□ 1.15
CIITA-206ENST00000571190 CLRN2A0PK11 232 aa22.23■■□□□ 1.15
CIITA-206ENST00000571190 NBPF7P0C2Y1 421 aaPredicted RBP22.23■■□□□ 1.15
CIITA-206ENST00000571190 TAF7LQ5H9L4 462 aa22.23■■□□□ 1.15
CIITA-206ENST00000571190 ZNF296Q8WUU4 475 aaPredicted RBP22.23■■□□□ 1.15
CIITA-206ENST00000571190 ANGEL1Q9UNK9 670 aaKnown RBP22.23■■□□□ 1.15
CIITA-206ENST00000571190 SSC5DA1L4H1 1573 aa22.22■■□□□ 1.15
CIITA-206ENST00000571190 MAP3K11Q16584 847 aa22.22■■□□□ 1.15
CIITA-206ENST00000571190 TDRD7Q8NHU6 1098 aaKnown RBP22.22■■□□□ 1.15
CIITA-206ENST00000571190 R3HDMLQ9H3Y0 253 aa22.22■■□□□ 1.15
CIITA-206ENST00000571190 UTYO14607 1347 aa22.22■■□□□ 1.15
CIITA-206ENST00000571190 UBE4AQ14139 1066 aa22.21■■□□□ 1.15
CIITA-206ENST00000571190 SPRYD7Q5W111 196 aa22.21■■□□□ 1.15
CIITA-206ENST00000571190 FAM84BQ96KN1 310 aaPredicted RBP22.21■■□□□ 1.15
CIITA-206ENST00000571190 RIPOR2Q9Y4F9 1068 aa22.21■■□□□ 1.15
CIITA-206ENST00000571190 FAM205AQ6ZU69 1335 aa22.21■■□□□ 1.15
CIITA-206ENST00000571190 GYG1P46976 350 aa22.2■■□□□ 1.14
CIITA-206ENST00000571190 MRPL50Q8N5N7 158 aaKnown RBP22.2■■□□□ 1.14
CIITA-206ENST00000571190 CLMNQ96JQ2 1002 aa22.2■■□□□ 1.14
CIITA-206ENST00000571190 COL1A1P02452 1464 aaPredicted RBP22.2■■□□□ 1.14
CIITA-206ENST00000571190 GPR25O00155 361 aa22.19■■□□□ 1.14
CIITA-206ENST00000571190 RABL6Q3YEC7 729 aaPredicted RBP22.19■■□□□ 1.14
CIITA-206ENST00000571190 NOM1Q5C9Z4 860 aaKnown RBP22.19■■□□□ 1.14
CIITA-206ENST00000571190 CFHR5Q9BXR6 569 aa22.19■■□□□ 1.14
CIITA-206ENST00000571190 PPP2R3BQ9Y5P8 575 aa22.19■■□□□ 1.14
CIITA-206ENST00000571190 HIBADHP31937 336 aaKnown RBP22.18■■□□□ 1.14
CIITA-206ENST00000571190 SOX10P56693 466 aa22.18■■□□□ 1.14
CIITA-206ENST00000571190 SREBF2Q12772 1141 aa22.18■■□□□ 1.14
CIITA-206ENST00000571190 NBPF12Q5TAG4 269 aaPredicted RBP22.18■■□□□ 1.14
CIITA-206ENST00000571190 ANKRD44Q8N8A2 993 aa22.18■■□□□ 1.14
CIITA-206ENST00000571190 BICC1Q9H694 974 aaKnown RBP22.18■■□□□ 1.14
CIITA-206ENST00000571190 MFSD14BQ5SR56 506 aa22.17■■□□□ 1.14
CIITA-206ENST00000571190 SLC10A4Q96EP9 437 aa22.17■■□□□ 1.14
CIITA-206ENST00000571190 VEZTQ9HBM0 779 aa22.17■■□□□ 1.14
CIITA-206ENST00000571190 HPS5Q9UPZ3 1129 aa22.17■■□□□ 1.14
CIITA-206ENST00000571190 MYO1BO43795 1136 aa22.16■■□□□ 1.14
CIITA-206ENST00000571190 RASA3Q14644 834 aa22.16■■□□□ 1.14
CIITA-206ENST00000571190 GRIK5Q16478 980 aa22.16■■□□□ 1.14
CIITA-206ENST00000571190 LRRC24Q50LG9 513 aa22.16■■□□□ 1.14
CIITA-206ENST00000571190 PPP1R12BO60237 982 aaPredicted RBP22.15■■□□□ 1.14
CIITA-206ENST00000571190 USP2O75604 605 aaPredicted RBP22.15■■□□□ 1.14
CIITA-206ENST00000571190 RBM5P52756 815 aaKnown RBP eCLIP22.15■■□□□ 1.14
CIITA-206ENST00000571190 SUPT20HL1Q3ZLR7 823 aa22.15■■□□□ 1.14
CIITA-206ENST00000571190 FBXO33Q7Z6M2 555 aa22.15■■□□□ 1.14
CIITA-206ENST00000571190 WNK4Q96J92 1243 aa22.15■■□□□ 1.14
CIITA-206ENST00000571190 ZNF70Q9UC06 446 aaPredicted RBP22.15■■□□□ 1.14
CIITA-206ENST00000571190 GJA5P36382 358 aa22.14■■□□□ 1.13
CIITA-206ENST00000571190 PKN2Q16513 984 aaKnown RBP22.14■■□□□ 1.13
CIITA-206ENST00000571190 SPDYE2Q495Y8 402 aa22.14■■□□□ 1.13
CIITA-206ENST00000571190 VGLL2Q8N8G2 317 aa22.14■■□□□ 1.13
CIITA-206ENST00000571190 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.14■■□□□ 1.13
CIITA-206ENST00000571190 SERPINA10Q9UK55 444 aa22.14■■□□□ 1.13
CIITA-206ENST00000571190 TTF2Q9UNY4 1162 aaKnown RBP22.14■■□□□ 1.13
CIITA-206ENST00000571190 MROH5Q6ZUA9 1318 aa22.13■■□□□ 1.13
CIITA-206ENST00000571190 MANSC4A6NHS7 340 aaPredicted RBP22.13■■□□□ 1.13
CIITA-206ENST00000571190 UNCXA6NJT0 531 aa22.13■■□□□ 1.13
CIITA-206ENST00000571190 IFNL1Q8IU54 200 aa22.13■■□□□ 1.13
CIITA-206ENST00000571190 CDAN1Q8IWY9 1227 aa22.13■■□□□ 1.13
CIITA-206ENST00000571190 SSH1Q8WYL5 1049 aa22.13■■□□□ 1.13
CIITA-206ENST00000571190 TEPSINQ96N21 525 aa22.13■■□□□ 1.13
CIITA-206ENST00000571190 TDRD3Q9H7E2 651 aaKnown RBP22.13■■□□□ 1.13
CIITA-206ENST00000571190 IGF2BP3O00425 579 aaKnown RBP eCLIP22.12■■□□□ 1.13
CIITA-206ENST00000571190 FKTNO75072 461 aa22.12■■□□□ 1.13
CIITA-206ENST00000571190 ZBTB48P10074 688 aaPredicted RBP22.12■■□□□ 1.13
CIITA-206ENST00000571190 INHBEP58166 350 aa22.12■■□□□ 1.13
CIITA-206ENST00000571190 DZIP1LQ8IYY4 767 aaKnown RBP22.12■■□□□ 1.13
CIITA-206ENST00000571190 KLHDC4Q8TBB5 520 aa22.12■■□□□ 1.13
CIITA-206ENST00000571190 USP44Q9H0E7 712 aa22.12■■□□□ 1.13
CIITA-206ENST00000571190 IQSEC3Q9UPP2 1182 aaPredicted RBP22.12■■□□□ 1.13
CIITA-206ENST00000571190 A0A1B0GUL6 1792 aa22.12■■□□□ 1.13
CIITA-206ENST00000571190 PTPRCP08575 1304 aa22.11■■□□□ 1.13
CIITA-206ENST00000571190 CACNA1FO60840 1977 aa22.1■■□□□ 1.13
CIITA-206ENST00000571190 E9PSI1 815 aa22.1■■□□□ 1.13
CIITA-206ENST00000571190 ALDH1A1P00352 501 aa22.1■■□□□ 1.13
CIITA-206ENST00000571190 CRKP46108 304 aa22.1■■□□□ 1.13
CIITA-206ENST00000571190 SLFN5Q08AF3 891 aa22.1■■□□□ 1.13
CIITA-206ENST00000571190 METTL24Q5JXM2 366 aa22.1■■□□□ 1.13
CIITA-206ENST00000571190 PDE8BO95263 885 aa22.09■■□□□ 1.13
CIITA-206ENST00000571190 IREB2P48200 963 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms