RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 TPRNQ4KMQ1 711 aa16.5■□□□□ 0.23
GCOM1-213ENST00000569945 NLRP10Q86W26 655 aa16.5■□□□□ 0.23
GCOM1-213ENST00000569945 UBXN6Q9BZV1 441 aa16.5■□□□□ 0.23
GCOM1-213ENST00000569945 AFDNP55196 1824 aaKnown RBP16.49■□□□□ 0.23
GCOM1-213ENST00000569945 ZRANB2O95218 330 aaKnown RBP eCLIP16.49■□□□□ 0.23
GCOM1-213ENST00000569945 CLCN6P51797 869 aa16.49■□□□□ 0.23
GCOM1-213ENST00000569945 PTPN14Q15678 1187 aa16.49■□□□□ 0.23
GCOM1-213ENST00000569945 SUSD4Q5VX71 490 aa16.49■□□□□ 0.23
GCOM1-213ENST00000569945 OSBPL3Q9H4L5 887 aa16.49■□□□□ 0.23
GCOM1-213ENST00000569945 HDAC5Q9UQL6 1122 aa16.49■□□□□ 0.23
GCOM1-213ENST00000569945 F13A1P00488 732 aa16.48■□□□□ 0.23
GCOM1-213ENST00000569945 NFIXQ14938 502 aa16.48■□□□□ 0.23
GCOM1-213ENST00000569945 KRBA2Q6ZNG9 492 aa16.48■□□□□ 0.23
GCOM1-213ENST00000569945 ESYT1Q9BSJ8 1104 aa16.48■□□□□ 0.23
GCOM1-213ENST00000569945 CBX8Q9HC52 389 aa16.48■□□□□ 0.23
GCOM1-213ENST00000569945 GYS2P54840 703 aa16.48■□□□□ 0.23
GCOM1-213ENST00000569945 TYRO3Q06418 890 aa16.48■□□□□ 0.23
GCOM1-213ENST00000569945 CLEC4GQ6UXB4 293 aa16.48■□□□□ 0.23
GCOM1-213ENST00000569945 DRC7Q8IY82 874 aa16.48■□□□□ 0.23
GCOM1-213ENST00000569945 CCDC24Q8N4L8 307 aa16.48■□□□□ 0.23
GCOM1-213ENST00000569945 TDRD7Q8NHU6 1098 aaKnown RBP16.47■□□□□ 0.23
GCOM1-213ENST00000569945 TMX1Q9H3N1 280 aa16.47■□□□□ 0.23
GCOM1-213ENST00000569945 L2HGDHQ9H9P8 463 aa16.47■□□□□ 0.23
GCOM1-213ENST00000569945 KCND1Q9NSA2 647 aa16.47■□□□□ 0.23
GCOM1-213ENST00000569945 CWC25Q9NXE8 425 aaPredicted RBP16.47■□□□□ 0.23
GCOM1-213ENST00000569945 ANKRD36CQ5JPF3 1778 aa16.47■□□□□ 0.23
GCOM1-213ENST00000569945 N4BP2Q86UW6 1770 aaPredicted RBP16.47■□□□□ 0.23
GCOM1-213ENST00000569945 STX6O43752 255 aa16.47■□□□□ 0.23
GCOM1-213ENST00000569945 ALDH1L1O75891 902 aa16.47■□□□□ 0.23
GCOM1-213ENST00000569945 SYT1P21579 422 aa16.47■□□□□ 0.23
GCOM1-213ENST00000569945 CDC25BP30305 580 aa16.47■□□□□ 0.23
GCOM1-213ENST00000569945 TEX35Q5T0J7 233 aa16.47■□□□□ 0.23
GCOM1-213ENST00000569945 LRRC8AQ8IWT6 810 aa16.47■□□□□ 0.23
GCOM1-213ENST00000569945 C10orf67Q8IYJ2 551 aa16.47■□□□□ 0.23
GCOM1-213ENST00000569945 FAM89AQ96GI7 184 aa16.47■□□□□ 0.23
GCOM1-213ENST00000569945 ZNF652Q9Y2D9 606 aa16.47■□□□□ 0.23
GCOM1-213ENST00000569945 MCCP23508 829 aa16.46■□□□□ 0.23
GCOM1-213ENST00000569945 GUCY2CP25092 1073 aa16.46■□□□□ 0.23
GCOM1-213ENST00000569945 HMGB2P26583 209 aaKnown RBP16.46■□□□□ 0.23
GCOM1-213ENST00000569945 HSP90AB3PQ58FF7 597 aa16.46■□□□□ 0.23
GCOM1-213ENST00000569945 NUTM1Q86Y26 1132 aa16.46■□□□□ 0.23
GCOM1-213ENST00000569945 FLAD1Q8NFF5 587 aa16.46■□□□□ 0.23
GCOM1-213ENST00000569945 SMARCE1Q969G3 411 aa16.46■□□□□ 0.23
GCOM1-213ENST00000569945 NCAPGQ9BPX3 1015 aa16.46■□□□□ 0.23
GCOM1-213ENST00000569945 UPF3BQ9BZI7 483 aaKnown RBP16.46■□□□□ 0.23
GCOM1-213ENST00000569945 TRIM5Q9C035 493 aa16.46■□□□□ 0.23
GCOM1-213ENST00000569945 BRMS1Q9HCU9 246 aa16.46■□□□□ 0.23
GCOM1-213ENST00000569945 ST5P78524 1137 aa16.46■□□□□ 0.23
GCOM1-213ENST00000569945 DDR1Q08345 913 aa16.46■□□□□ 0.23
GCOM1-213ENST00000569945 TRIM28Q13263 835 aaKnown RBP16.46■□□□□ 0.23
GCOM1-213ENST00000569945 ERCC6LQ2NKX8 1250 aa16.46■□□□□ 0.23
GCOM1-213ENST00000569945 UBE3BQ7Z3V4 1068 aa16.46■□□□□ 0.23
GCOM1-213ENST00000569945 CCDC191Q8NCU4 936 aa16.46■□□□□ 0.23
GCOM1-213ENST00000569945 C9orf78Q9NZ63 289 aaPredicted RBP16.46■□□□□ 0.23
GCOM1-213ENST00000569945 GRM8O00222 908 aa16.45■□□□□ 0.22
GCOM1-213ENST00000569945 TM4SF1P30408 202 aa16.45■□□□□ 0.22
GCOM1-213ENST00000569945 CASP7P55210 303 aa16.45■□□□□ 0.22
GCOM1-213ENST00000569945 MYCBPQ99417 103 aaPredicted RBP16.45■□□□□ 0.22
GCOM1-213ENST00000569945 CLIP2Q9UDT6 1046 aa16.45■□□□□ 0.22
GCOM1-213ENST00000569945 EXOC6BQ9Y2D4 811 aa16.45■□□□□ 0.22
GCOM1-213ENST00000569945 ATP6V1DQ9Y5K8 247 aa16.45■□□□□ 0.22
GCOM1-213ENST00000569945 QSER1Q2KHR3 1735 aa16.45■□□□□ 0.22
GCOM1-213ENST00000569945 CLGNO14967 610 aa16.45■□□□□ 0.22
GCOM1-213ENST00000569945 TPM4P67936 248 aa16.45■□□□□ 0.22
GCOM1-213ENST00000569945 MAP3K11Q16584 847 aa16.45■□□□□ 0.22
GCOM1-213ENST00000569945 ZSCAN26Q16670 478 aa16.45■□□□□ 0.22
GCOM1-213ENST00000569945 CEP85Q6P2H3 762 aa16.45■□□□□ 0.22
GCOM1-213ENST00000569945 RPAP2Q8IXW5 612 aaPredicted RBP16.45■□□□□ 0.22
GCOM1-213ENST00000569945 KAZALD1Q96I82 304 aa16.45■□□□□ 0.22
GCOM1-213ENST00000569945 SETDB2Q96T68 719 aa16.45■□□□□ 0.22
GCOM1-213ENST00000569945 LRRFIP2Q9Y608 721 aaKnown RBP16.45■□□□□ 0.22
GCOM1-213ENST00000569945 H7C1W4 665 aa16.44■□□□□ 0.22
GCOM1-213ENST00000569945 ZBTB7AO95365 584 aa16.44■□□□□ 0.22
GCOM1-213ENST00000569945 NTSR2O95665 410 aa16.44■□□□□ 0.22
GCOM1-213ENST00000569945 CCDC93Q567U6 631 aa16.44■□□□□ 0.22
GCOM1-213ENST00000569945 EPHA10Q5JZY3 1008 aa16.44■□□□□ 0.22
GCOM1-213ENST00000569945 SRLQ86TD4 932 aa16.44■□□□□ 0.22
GCOM1-213ENST00000569945 SUCLG2Q96I99 432 aa16.44■□□□□ 0.22
GCOM1-213ENST00000569945 TRMT112Q9UI30 125 aaKnown RBP16.44■□□□□ 0.22
GCOM1-213ENST00000569945 NEMFO60524 1076 aa16.44■□□□□ 0.22
GCOM1-213ENST00000569945 PDE1AP54750 535 aa16.44■□□□□ 0.22
GCOM1-213ENST00000569945 DNM1Q05193 864 aaKnown RBP16.44■□□□□ 0.22
GCOM1-213ENST00000569945 ANO6Q4KMQ2 910 aa16.44■□□□□ 0.22
GCOM1-213ENST00000569945 TSGA10IPQ3SY00 556 aa16.43■□□□□ 0.22
GCOM1-213ENST00000569945 LRRN4CLQ8ND94 238 aa16.43■□□□□ 0.22
GCOM1-213ENST00000569945 NPHP1O15259 732 aa16.42■□□□□ 0.22
GCOM1-213ENST00000569945 ARID5BQ14865 1188 aa16.42■□□□□ 0.22
GCOM1-213ENST00000569945 ERFEQ4G0M1 354 aa16.42■□□□□ 0.22
GCOM1-213ENST00000569945 RBM43Q6ZSC3 357 aaKnown RBP16.42■□□□□ 0.22
GCOM1-213ENST00000569945 CCAR2Q8N163 923 aaKnown RBP16.42■□□□□ 0.22
GCOM1-213ENST00000569945 UTP14AQ9BVJ6 771 aaKnown RBP16.42■□□□□ 0.22
GCOM1-213ENST00000569945 NUP62CLQ9H1M0 184 aa16.42■□□□□ 0.22
GCOM1-213ENST00000569945 SRCAPQ6ZRS2 3230 aa16.42■□□□□ 0.22
GCOM1-213ENST00000569945 ELP1O95163 1332 aa16.42■□□□□ 0.22
GCOM1-213ENST00000569945 POLRMTO00411 1230 aaKnown RBP16.42■□□□□ 0.22
GCOM1-213ENST00000569945 POLR3GO15318 223 aaPredicted RBP16.42■□□□□ 0.22
GCOM1-213ENST00000569945 MMP10P09238 476 aa16.42■□□□□ 0.22
GCOM1-213ENST00000569945 UBTFL1P0CB47 393 aaPredicted RBP16.42■□□□□ 0.22
GCOM1-213ENST00000569945 CCZ1BP86790 482 aa16.42■□□□□ 0.22
GCOM1-213ENST00000569945 CCZ1P86791 482 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms