RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 TRMT2AQ8IZ69 625 aaKnown RBP28.32■■■□□ 2.12
RBFOX1-219ENST00000569895 RIPOR2Q9Y4F9 1068 aa28.32■■■□□ 2.12
RBFOX1-219ENST00000569895 MYO1BO43795 1136 aa28.31■■■□□ 2.12
RBFOX1-219ENST00000569895 HIBADHP31937 336 aaKnown RBP28.31■■■□□ 2.12
RBFOX1-219ENST00000569895 TTLL12Q14166 644 aaPredicted RBP28.31■■■□□ 2.12
RBFOX1-219ENST00000569895 PRAMEF18Q5VWM3 479 aa28.31■■■□□ 2.12
RBFOX1-219ENST00000569895 CERS5Q8N5B7 392 aa28.31■■■□□ 2.12
RBFOX1-219ENST00000569895 ZBED3Q96IU2 234 aaPredicted RBP28.31■■■□□ 2.12
RBFOX1-219ENST00000569895 PUS3Q9BZE2 481 aaKnown RBP28.31■■■□□ 2.12
RBFOX1-219ENST00000569895 MTMR14Q8NCE2 650 aa28.3■■■□□ 2.12
RBFOX1-219ENST00000569895 USP44Q9H0E7 712 aa28.3■■■□□ 2.12
RBFOX1-219ENST00000569895 F8W031 263 aaPredicted RBP28.29■■■□□ 2.12
RBFOX1-219ENST00000569895 ANKRD44Q8N8A2 993 aa28.29■■■□□ 2.12
RBFOX1-219ENST00000569895 SAGE1Q9NXZ1 904 aa28.29■■■□□ 2.12
RBFOX1-219ENST00000569895 METTL24Q5JXM2 366 aa28.28■■■□□ 2.12
RBFOX1-219ENST00000569895 VPS37DQ86XT2 251 aa28.28■■■□□ 2.12
RBFOX1-219ENST00000569895 TDRD7Q8NHU6 1098 aaKnown RBP28.28■■■□□ 2.12
RBFOX1-219ENST00000569895 FAM205AQ6ZU69 1335 aa28.27■■■□□ 2.12
RBFOX1-219ENST00000569895 UBE2Q2LH0YL09 131 aa28.27■■■□□ 2.12
RBFOX1-219ENST00000569895 GYG1P46976 350 aa28.27■■■□□ 2.12
RBFOX1-219ENST00000569895 ARMC9Q7Z3E5 817 aa28.27■■■□□ 2.12
RBFOX1-219ENST00000569895 RASAL3Q86YV0 1011 aa28.27■■■□□ 2.12
RBFOX1-219ENST00000569895 FAM84BQ96KN1 310 aaPredicted RBP28.27■■■□□ 2.12
RBFOX1-219ENST00000569895 PAPPA2Q9BXP8 1791 aa28.27■■■□□ 2.12
RBFOX1-219ENST00000569895 CFAP100Q494V2 611 aa28.26■■■□□ 2.11
RBFOX1-219ENST00000569895 CAVIN4Q5BKX8 364 aa28.26■■■□□ 2.11
RBFOX1-219ENST00000569895 JAG2Q9Y219 1238 aa28.26■■■□□ 2.11
RBFOX1-219ENST00000569895 ZNF646O15015 1829 aaPredicted RBP28.25■■■□□ 2.11
RBFOX1-219ENST00000569895 RBM5P52756 815 aaKnown RBP eCLIP28.25■■■□□ 2.11
RBFOX1-219ENST00000569895 MOB2Q70IA6 237 aa28.25■■■□□ 2.11
RBFOX1-219ENST00000569895 ABHD8Q96I13 439 aa28.25■■■□□ 2.11
RBFOX1-219ENST00000569895 CSRNP1Q96S65 589 aa28.25■■■□□ 2.11
RBFOX1-219ENST00000569895 DEFB129Q9H1M3 183 aa28.25■■■□□ 2.11
RBFOX1-219ENST00000569895 HDAC5Q9UQL6 1122 aa28.25■■■□□ 2.11
RBFOX1-219ENST00000569895 PDE8BO95263 885 aa28.24■■■□□ 2.11
RBFOX1-219ENST00000569895 LRRC24Q50LG9 513 aa28.24■■■□□ 2.11
RBFOX1-219ENST00000569895 MFSD14BQ5SR56 506 aa28.24■■■□□ 2.11
RBFOX1-219ENST00000569895 API5Q9BZZ5 524 aaKnown RBP28.24■■■□□ 2.11
RBFOX1-219ENST00000569895 PPP2R3BQ9Y5P8 575 aa28.24■■■□□ 2.11
RBFOX1-219ENST00000569895 SPDYE2BA6NHP3 402 aa28.23■■■□□ 2.11
RBFOX1-219ENST00000569895 SPDYE6P0CI01 402 aa28.23■■■□□ 2.11
RBFOX1-219ENST00000569895 RNF186Q9NXI6 227 aa28.23■■■□□ 2.11
RBFOX1-219ENST00000569895 NOB1Q9ULX3 412 aaKnown RBP28.23■■■□□ 2.11
RBFOX1-219ENST00000569895 COL1A1P02452 1464 aaPredicted RBP28.22■■■□□ 2.11
RBFOX1-219ENST00000569895 FRAT2O75474 233 aaPredicted RBP28.22■■■□□ 2.11
RBFOX1-219ENST00000569895 TRPA1O75762 1119 aa28.22■■■□□ 2.11
RBFOX1-219ENST00000569895 FBXO33Q7Z6M2 555 aa28.22■■■□□ 2.11
RBFOX1-219ENST00000569895 PRMT6Q96LA8 375 aaPredicted RBP28.22■■■□□ 2.11
RBFOX1-219ENST00000569895 A0A1B0GUL6 1792 aa28.21■■■□□ 2.11
RBFOX1-219ENST00000569895 UBTFL1P0CB47 393 aaPredicted RBP28.2■■■□□ 2.1
RBFOX1-219ENST00000569895 SUPT20HL1Q3ZLR7 823 aa28.2■■■□□ 2.1
RBFOX1-219ENST00000569895 SERPINA10Q9UK55 444 aa28.2■■■□□ 2.1
RBFOX1-219ENST00000569895 TTF2Q9UNY4 1162 aaKnown RBP28.2■■■□□ 2.1
RBFOX1-219ENST00000569895 PPP1R12BO60237 982 aaPredicted RBP28.19■■■□□ 2.1
RBFOX1-219ENST00000569895 IFIT1P09914 478 aaKnown RBP28.19■■■□□ 2.1
RBFOX1-219ENST00000569895 PRKG1Q13976 671 aa28.19■■■□□ 2.1
RBFOX1-219ENST00000569895 VGLL2Q8N8G2 317 aa28.19■■■□□ 2.1
RBFOX1-219ENST00000569895 KLHDC4Q8TBB5 520 aa28.19■■■□□ 2.1
RBFOX1-219ENST00000569895 TBC1D22AQ8WUA7 517 aa28.19■■■□□ 2.1
RBFOX1-219ENST00000569895 VEZTQ9HBM0 779 aa28.19■■■□□ 2.1
RBFOX1-219ENST00000569895 ANGEL1Q9UNK9 670 aaKnown RBP28.19■■■□□ 2.1
RBFOX1-219ENST00000569895 CLRN2A0PK11 232 aa28.18■■■□□ 2.1
RBFOX1-219ENST00000569895 PUM3Q15397 648 aaKnown RBP28.18■■■□□ 2.1
RBFOX1-219ENST00000569895 PCDHAC2Q9Y5I4 1007 aa28.18■■■□□ 2.1
RBFOX1-219ENST00000569895 EYA2O00167 538 aa28.17■■■□□ 2.1
RBFOX1-219ENST00000569895 PTPN12Q05209 780 aaKnown RBP28.17■■■□□ 2.1
RBFOX1-219ENST00000569895 TNFAIP1Q13829 316 aa28.17■■■□□ 2.1
RBFOX1-219ENST00000569895 LDLRAD1Q5T700 205 aa28.16■■■□□ 2.1
RBFOX1-219ENST00000569895 FBXO3Q9UK99 471 aa28.16■■■□□ 2.1
RBFOX1-219ENST00000569895 KIF16BQ96L93 1317 aa28.16■■■□□ 2.1
RBFOX1-219ENST00000569895 RARSP54136 660 aaKnown RBP28.15■■■□□ 2.1
RBFOX1-219ENST00000569895 CHAF1AQ13111 956 aaPredicted RBP28.15■■■□□ 2.1
RBFOX1-219ENST00000569895 DGKZQ13574 1117 aa28.15■■■□□ 2.1
RBFOX1-219ENST00000569895 ARHGAP45Q92619 1136 aa28.15■■■□□ 2.1
RBFOX1-219ENST00000569895 UNCXA6NJT0 531 aa28.14■■■□□ 2.1
RBFOX1-219ENST00000569895 RFX5P48382 616 aaPredicted RBP28.14■■■□□ 2.1
RBFOX1-219ENST00000569895 BCAMP50895 628 aa28.14■■■□□ 2.1
RBFOX1-219ENST00000569895 SREBF2Q12772 1141 aa28.14■■■□□ 2.1
RBFOX1-219ENST00000569895 MAP3K11Q16584 847 aa28.14■■■□□ 2.1
RBFOX1-219ENST00000569895 SLC10A4Q96EP9 437 aa28.14■■■□□ 2.1
RBFOX1-219ENST00000569895 MCOLN1Q9GZU1 580 aa28.14■■■□□ 2.1
RBFOX1-219ENST00000569895 IQSEC3Q9UPP2 1182 aaPredicted RBP28.14■■■□□ 2.1
RBFOX1-219ENST00000569895 SLC5A1P13866 664 aa28.13■■■□□ 2.09
RBFOX1-219ENST00000569895 TM4SF4P48230 202 aa28.13■■■□□ 2.09
RBFOX1-219ENST00000569895 HDLBPQ00341 1268 aaKnown RBP28.13■■■□□ 2.09
RBFOX1-219ENST00000569895 RASA3Q14644 834 aa28.13■■■□□ 2.09
RBFOX1-219ENST00000569895 DZIP1LQ8IYY4 767 aaKnown RBP28.13■■■□□ 2.09
RBFOX1-219ENST00000569895 LPIN2Q92539 896 aa28.13■■■□□ 2.09
RBFOX1-219ENST00000569895 ZNF70Q9UC06 446 aaPredicted RBP28.13■■■□□ 2.09
RBFOX1-219ENST00000569895 CCDC85CA6NKD9 419 aa28.12■■■□□ 2.09
RBFOX1-219ENST00000569895 FGFR2P21802 821 aa28.12■■■□□ 2.09
RBFOX1-219ENST00000569895 CRKP46108 304 aa28.12■■■□□ 2.09
RBFOX1-219ENST00000569895 SPDYE2Q495Y8 402 aa28.12■■■□□ 2.09
RBFOX1-219ENST00000569895 IPO8O15397 1037 aaKnown RBP28.11■■■□□ 2.09
RBFOX1-219ENST00000569895 TDRD3Q9H7E2 651 aaKnown RBP28.11■■■□□ 2.09
RBFOX1-219ENST00000569895 CEP126Q9P2H0 1117 aa28.11■■■□□ 2.09
RBFOX1-219ENST00000569895 SUGT1Q9Y2Z0 365 aa28.11■■■□□ 2.09
RBFOX1-219ENST00000569895 CIAO1O76071 339 aa28.1■■■□□ 2.09
RBFOX1-219ENST00000569895 IREB2P48200 963 aaKnown RBP28.1■■■□□ 2.09
RBFOX1-219ENST00000569895 TNNI2P48788 182 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms