RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 PLEKHF1Q96S99 279 aa10.93□□□□□ -0.66
SNX29-208ENST00000569801 NBPF3Q9H094 633 aa10.93□□□□□ -0.66
SNX29-208ENST00000569801 TSPYL2Q9H2G4 693 aaPredicted RBP10.93□□□□□ -0.66
SNX29-208ENST00000569801 ZFYVE28Q9HCC9 887 aa10.93□□□□□ -0.66
SNX29-208ENST00000569801 ZNF330Q9Y3S2 320 aaPredicted RBP10.93□□□□□ -0.66
SNX29-208ENST00000569801 USP16Q9Y5T5 823 aa10.93□□□□□ -0.66
SNX29-208ENST00000569801 POLR2AP24928 1970 aaKnown RBP10.93□□□□□ -0.66
SNX29-208ENST00000569801 RIC1Q4ADV7 1423 aa10.92□□□□□ -0.66
SNX29-208ENST00000569801 NF2P35240 595 aa10.92□□□□□ -0.66
SNX29-208ENST00000569801 PIP4K2AP48426 406 aaPredicted RBP10.92□□□□□ -0.66
SNX29-208ENST00000569801 ZBTB38Q8NAP3 1195 aaPredicted RBP10.92□□□□□ -0.66
SNX29-208ENST00000569801 DCHS1Q96JQ0 3298 aa10.92□□□□□ -0.66
SNX29-208ENST00000569801 CAMTA2O94983 1202 aa10.91□□□□□ -0.66
SNX29-208ENST00000569801 SNRPA1P09661 255 aaKnown RBP10.91□□□□□ -0.66
SNX29-208ENST00000569801 TAF1CQ15572 869 aaPredicted RBP10.91□□□□□ -0.66
SNX29-208ENST00000569801 C9orf50Q5SZB4 431 aa10.91□□□□□ -0.66
SNX29-208ENST00000569801 NBPF26B4DH59 902 aa10.9□□□□□ -0.66
SNX29-208ENST00000569801 RPS12P25398 132 aaKnown RBP10.9□□□□□ -0.66
SNX29-208ENST00000569801 KIAA2012Q0VF49 1180 aa10.9□□□□□ -0.66
SNX29-208ENST00000569801 RALBP1Q15311 655 aa10.9□□□□□ -0.66
SNX29-208ENST00000569801 TAF7Q15545 349 aaPredicted RBP10.9□□□□□ -0.66
SNX29-208ENST00000569801 NFE2L2Q16236 605 aa10.9□□□□□ -0.66
SNX29-208ENST00000569801 NBPF10Q6P3W6 841 aaKnown RBP10.9□□□□□ -0.66
SNX29-208ENST00000569801 LURAP1LQ8IV03 231 aa10.9□□□□□ -0.66
SNX29-208ENST00000569801 SUPT20HQ8NEM7 779 aa10.9□□□□□ -0.66
SNX29-208ENST00000569801 ZNF576Q9H609 170 aa10.9□□□□□ -0.66
SNX29-208ENST00000569801 C11orf49Q9H6J7 331 aa10.9□□□□□ -0.66
SNX29-208ENST00000569801 CD320Q9NPF0 282 aa10.9□□□□□ -0.66
SNX29-208ENST00000569801 MIS18AQ9NYP9 233 aa10.9□□□□□ -0.66
SNX29-208ENST00000569801 TESPA1A2RU30 521 aaPredicted RBP10.89□□□□□ -0.67
SNX29-208ENST00000569801 NEFMP07197 916 aa10.89□□□□□ -0.67
SNX29-208ENST00000569801 HOXD10P28358 340 aa10.89□□□□□ -0.67
SNX29-208ENST00000569801 PTPN5P54829 565 aa10.89□□□□□ -0.67
SNX29-208ENST00000569801 DDX10Q13206 875 aaKnown RBP10.89□□□□□ -0.67
SNX29-208ENST00000569801 DZIP3Q86Y13 1208 aaKnown RBP10.89□□□□□ -0.67
SNX29-208ENST00000569801 PRSS33Q8NF86 280 aa10.89□□□□□ -0.67
SNX29-208ENST00000569801 THUMPD2Q9BTF0 503 aaKnown RBP10.89□□□□□ -0.67
SNX29-208ENST00000569801 ANGEL1Q9UNK9 670 aaKnown RBP10.89□□□□□ -0.67
SNX29-208ENST00000569801 MAPK8IP3Q9UPT6 1336 aa10.88□□□□□ -0.67
SNX29-208ENST00000569801 OSBPP22059 807 aa10.88□□□□□ -0.67
SNX29-208ENST00000569801 CTGFP29279 349 aa10.88□□□□□ -0.67
SNX29-208ENST00000569801 NPM2Q86SE8 214 aaKnown RBP10.88□□□□□ -0.67
SNX29-208ENST00000569801 ANKLE1Q8NAG6 615 aa10.88□□□□□ -0.67
SNX29-208ENST00000569801 CLMNQ96JQ2 1002 aa10.88□□□□□ -0.67
SNX29-208ENST00000569801 TLL1O43897 1013 aa10.87□□□□□ -0.67
SNX29-208ENST00000569801 IGFBP4P22692 258 aa10.87□□□□□ -0.67
SNX29-208ENST00000569801 TPTE2Q6XPS3 522 aa10.87□□□□□ -0.67
SNX29-208ENST00000569801 PNISRQ8TF01 805 aaKnown RBP10.87□□□□□ -0.67
SNX29-208ENST00000569801 RTFDC1Q9BY42 306 aaPredicted RBP10.87□□□□□ -0.67
SNX29-208ENST00000569801 PRDM12Q9H4Q4 367 aa10.87□□□□□ -0.67
SNX29-208ENST00000569801 PAK6Q9NQU5 681 aaPredicted RBP10.87□□□□□ -0.67
SNX29-208ENST00000569801 RNF216Q9NWF9 866 aaPredicted RBP10.87□□□□□ -0.67
SNX29-208ENST00000569801 FZD1Q9UP38 647 aa10.87□□□□□ -0.67
SNX29-208ENST00000569801 MYPNQ86TC9 1320 aa10.86□□□□□ -0.67
SNX29-208ENST00000569801 LAMB2P55268 1798 aa10.86□□□□□ -0.67
SNX29-208ENST00000569801 ZIC2O95409 532 aaPredicted RBP10.86□□□□□ -0.67
SNX29-208ENST00000569801 GJA5P36382 358 aa10.86□□□□□ -0.67
SNX29-208ENST00000569801 PSMC4P43686 418 aa10.86□□□□□ -0.67
SNX29-208ENST00000569801 EIF4A1P60842 406 aaKnown RBP10.86□□□□□ -0.67
SNX29-208ENST00000569801 ADGRE1Q14246 886 aa10.86□□□□□ -0.67
SNX29-208ENST00000569801 CRY2Q49AN0 593 aa10.86□□□□□ -0.67
SNX29-208ENST00000569801 CLEC4GQ6UXB4 293 aa10.86□□□□□ -0.67
SNX29-208ENST00000569801 SLAIN1Q8ND83 568 aa10.86□□□□□ -0.67
SNX29-208ENST00000569801 PNNQ9H307 717 aaKnown RBP10.86□□□□□ -0.67
SNX29-208ENST00000569801 FAM86C1Q9NVL1 165 aa10.86□□□□□ -0.67
SNX29-208ENST00000569801 NUP98P52948 1817 aa10.86□□□□□ -0.67
SNX29-208ENST00000569801 MYBBP1AQ9BQG0 1328 aaKnown RBP10.85□□□□□ -0.67
SNX29-208ENST00000569801 TMX4Q9H1E5 349 aaPredicted RBP10.85□□□□□ -0.67
SNX29-208ENST00000569801 FAM208BQ5VWN6 2430 aa10.85□□□□□ -0.67
SNX29-208ENST00000569801 FAM177BA6PVY3 158 aa10.84□□□□□ -0.67
SNX29-208ENST00000569801 FMNL1O95466 1100 aaPredicted RBP10.84□□□□□ -0.67
SNX29-208ENST00000569801 INHAP05111 366 aa10.84□□□□□ -0.67
SNX29-208ENST00000569801 DNAJB2P25686 324 aa10.84□□□□□ -0.67
SNX29-208ENST00000569801 RIPK4P57078 832 aa10.84□□□□□ -0.67
SNX29-208ENST00000569801 HLFQ16534 295 aa10.84□□□□□ -0.67
SNX29-208ENST00000569801 DGLUCYQ7Z3D6 616 aa10.84□□□□□ -0.67
SNX29-208ENST00000569801 SH2B1Q9NRF2 756 aaPredicted RBP10.84□□□□□ -0.67
SNX29-208ENST00000569801 ZNF652Q9Y2D9 606 aa10.84□□□□□ -0.67
SNX29-208ENST00000569801 ADGRA2Q96PE1 1338 aa10.84□□□□□ -0.67
SNX29-208ENST00000569801 TLR2O60603 784 aa10.83□□□□□ -0.68
SNX29-208ENST00000569801 ALADP13716 330 aa10.83□□□□□ -0.68
SNX29-208ENST00000569801 HOXA10P31260 410 aaPredicted RBP10.83□□□□□ -0.68
SNX29-208ENST00000569801 TMPOP42166 694 aaKnown RBP10.83□□□□□ -0.68
SNX29-208ENST00000569801 CCDC146Q8IYE0 955 aa10.83□□□□□ -0.68
SNX29-208ENST00000569801 RPGRQ92834 1020 aaKnown RBP10.83□□□□□ -0.68
SNX29-208ENST00000569801 NIP7Q9Y221 180 aaKnown RBP eCLIP10.83□□□□□ -0.68
SNX29-208ENST00000569801 NAV2Q8IVL1 2488 aa10.83□□□□□ -0.68
SNX29-208ENST00000569801 ASH1LQ9NR48 2969 aaKnown RBP10.83□□□□□ -0.68
SNX29-208ENST00000569801 PFASO15067 1338 aa10.83□□□□□ -0.68
SNX29-208ENST00000569801 ATRNL1Q5VV63 1379 aa10.82□□□□□ -0.68
SNX29-208ENST00000569801 ERC2O15083 957 aa10.82□□□□□ -0.68
SNX29-208ENST00000569801 PRKCZQ05513 592 aa10.82□□□□□ -0.68
SNX29-208ENST00000569801 LRRC26Q2I0M4 334 aa10.82□□□□□ -0.68
SNX29-208ENST00000569801 DPP8Q6V1X1 898 aaPredicted RBP10.82□□□□□ -0.68
SNX29-208ENST00000569801 HFE2Q6ZVN8 426 aa10.82□□□□□ -0.68
SNX29-208ENST00000569801 NGEFQ8N5V2 710 aa10.82□□□□□ -0.68
SNX29-208ENST00000569801 KCNQ5Q9NR82 932 aa10.82□□□□□ -0.68
SNX29-208ENST00000569801 TSPYL4Q9UJ04 414 aa10.82□□□□□ -0.68
SNX29-208ENST00000569801 RRP7AQ9Y3A4 280 aaKnown RBP10.82□□□□□ -0.68
SNX29-208ENST00000569801 SOWAHBA6NEL2 793 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms