RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 PCSK2P16519 638 aa9.88□□□□□ -0.83
CHD9-220ENST00000569794 ARL4DP49703 201 aa9.88□□□□□ -0.83
CHD9-220ENST00000569794 TMEM102Q8N9M5 508 aaPredicted RBP9.88□□□□□ -0.83
CHD9-220ENST00000569794 GAS2O43903 313 aaKnown RBP9.87□□□□□ -0.83
CHD9-220ENST00000569794 MAP4P27816 1152 aaKnown RBP9.87□□□□□ -0.83
CHD9-220ENST00000569794 PMEPA1Q969W9 287 aa9.87□□□□□ -0.83
CHD9-220ENST00000569794 MFSD14AQ96MC6 490 aa9.87□□□□□ -0.83
CHD9-220ENST00000569794 RNF114Q9Y508 228 aa9.87□□□□□ -0.83
CHD9-220ENST00000569794 KRTAP4-8A0A0G2JLE6 195 aa9.86□□□□□ -0.83
CHD9-220ENST00000569794 HOXA10P31260 410 aaPredicted RBP9.86□□□□□ -0.83
CHD9-220ENST00000569794 C8orf34Q49A92 452 aa9.86□□□□□ -0.83
CHD9-220ENST00000569794 NOM1Q5C9Z4 860 aaKnown RBP9.86□□□□□ -0.83
CHD9-220ENST00000569794 NXPE3Q969Y0 559 aa9.86□□□□□ -0.83
CHD9-220ENST00000569794 SOX1O00570 391 aaPredicted RBP9.85□□□□□ -0.83
CHD9-220ENST00000569794 YBX3P16989 372 aaKnown RBP eCLIP9.85□□□□□ -0.83
CHD9-220ENST00000569794 MZF1P28698 734 aaPredicted RBP9.85□□□□□ -0.83
CHD9-220ENST00000569794 SGO2Q562F6 1265 aa9.85□□□□□ -0.83
CHD9-220ENST00000569794 VN1R5Q7Z5H4 357 aa9.85□□□□□ -0.83
CHD9-220ENST00000569794 BSNDQ8WZ55 320 aa9.85□□□□□ -0.83
CHD9-220ENST00000569794 OSMRQ99650 979 aa9.85□□□□□ -0.83
CHD9-220ENST00000569794 TMPRSS13Q9BYE2 586 aa9.85□□□□□ -0.83
CHD9-220ENST00000569794 PIM2Q9P1W9 311 aa9.85□□□□□ -0.83
CHD9-220ENST00000569794 EIF1AXP47813 144 aaKnown RBP9.84□□□□□ -0.83
CHD9-220ENST00000569794 IKBKEQ14164 716 aa9.84□□□□□ -0.83
CHD9-220ENST00000569794 NUTM2GQ5VZR2 741 aa9.84□□□□□ -0.83
CHD9-220ENST00000569794 TTC16Q8NEE8 873 aa9.84□□□□□ -0.83
CHD9-220ENST00000569794 ZKSCAN3Q9BRR0 538 aa9.84□□□□□ -0.83
CHD9-220ENST00000569794 SUGCTQ9HAC7 445 aa9.84□□□□□ -0.83
CHD9-220ENST00000569794 ADGRE2Q9UHX3 823 aa9.84□□□□□ -0.83
CHD9-220ENST00000569794 TIAF1O95411 115 aa9.83□□□□□ -0.84
CHD9-220ENST00000569794 C12orf50Q8NA57 414 aaPredicted RBP9.83□□□□□ -0.84
CHD9-220ENST00000569794 SMG8Q8ND04 991 aaKnown RBP9.83□□□□□ -0.84
CHD9-220ENST00000569794 LOC100289279A0A1B0GTE1 492 aa9.82□□□□□ -0.84
CHD9-220ENST00000569794 MPSTP25325 297 aa9.82□□□□□ -0.84
CHD9-220ENST00000569794 GIMAP7Q8NHV1 300 aa9.82□□□□□ -0.84
CHD9-220ENST00000569794 USP26Q9BXU7 913 aa9.82□□□□□ -0.84
CHD9-220ENST00000569794 ATG3Q9NT62 314 aa9.82□□□□□ -0.84
CHD9-220ENST00000569794 EREGO14944 169 aa9.81□□□□□ -0.84
CHD9-220ENST00000569794 DLGAP3O95886 979 aa9.81□□□□□ -0.84
CHD9-220ENST00000569794 F13BP05160 661 aa9.81□□□□□ -0.84
CHD9-220ENST00000569794 FBXL6Q8N531 539 aa9.81□□□□□ -0.84
CHD9-220ENST00000569794 SOX17Q9H6I2 414 aaPredicted RBP9.81□□□□□ -0.84
CHD9-220ENST00000569794 CYP4F12Q9HCS2 524 aa9.81□□□□□ -0.84
CHD9-220ENST00000569794 LEMD3Q9Y2U8 911 aa9.81□□□□□ -0.84
CHD9-220ENST00000569794 TNFRSF21O75509 655 aa9.8□□□□□ -0.84
CHD9-220ENST00000569794 RXRBP28702 533 aa9.8□□□□□ -0.84
CHD9-220ENST00000569794 CPSF6Q16630 551 aaKnown RBP eCLIP9.8□□□□□ -0.84
CHD9-220ENST00000569794 BHLHE41Q9C0J9 482 aaPredicted RBP9.8□□□□□ -0.84
CHD9-220ENST00000569794 POLIQ9UNA4 740 aa9.8□□□□□ -0.84
CHD9-220ENST00000569794 PHACTR2O75167 634 aa9.79□□□□□ -0.84
CHD9-220ENST00000569794 EDN3P14138 238 aa9.79□□□□□ -0.84
CHD9-220ENST00000569794 FOSL1P15407 271 aa9.79□□□□□ -0.84
CHD9-220ENST00000569794 MSMPQ1L6U9 139 aa9.79□□□□□ -0.84
CHD9-220ENST00000569794 ABI1Q8IZP0 508 aa9.79□□□□□ -0.84
CHD9-220ENST00000569794 GTF3C2Q8WUA4 911 aaPredicted RBP9.79□□□□□ -0.84
CHD9-220ENST00000569794 FAM95CA0A1B0GW59 222 aa9.78□□□□□ -0.84
CHD9-220ENST00000569794 SNX29Q8TEQ0 813 aa9.78□□□□□ -0.84
CHD9-220ENST00000569794 OSBPL1AQ9BXW6 950 aa9.78□□□□□ -0.84
CHD9-220ENST00000569794 ESRRAP11474 423 aaPredicted RBP9.77□□□□□ -0.85
CHD9-220ENST00000569794 DRD2P14416 443 aa9.77□□□□□ -0.85
CHD9-220ENST00000569794 EXOSC6Q5RKV6 272 aaKnown RBP9.77□□□□□ -0.85
CHD9-220ENST00000569794 ALKBH2Q6NS38 261 aa9.77□□□□□ -0.85
CHD9-220ENST00000569794 PAOXQ6QHF9 649 aa9.77□□□□□ -0.85
CHD9-220ENST00000569794 SHISA5Q8N114 240 aa9.77□□□□□ -0.85
CHD9-220ENST00000569794 ASAP3Q8TDY4 903 aa9.77□□□□□ -0.85
CHD9-220ENST00000569794 CCDC97Q96F63 343 aaPredicted RBP9.77□□□□□ -0.85
CHD9-220ENST00000569794 ANGEL1Q9UNK9 670 aaKnown RBP9.77□□□□□ -0.85
CHD9-220ENST00000569794 MTMR3Q13615 1198 aa9.76□□□□□ -0.85
CHD9-220ENST00000569794 NFKBIBQ15653 356 aa9.76□□□□□ -0.85
CHD9-220ENST00000569794 CDPF1Q6NVV7 123 aa9.76□□□□□ -0.85
CHD9-220ENST00000569794 C2CD4AQ8NCU7 369 aaPredicted RBP9.76□□□□□ -0.85
CHD9-220ENST00000569794 FBLIM1Q8WUP2 373 aa9.76□□□□□ -0.85
CHD9-220ENST00000569794 FOXD3Q9UJU5 478 aaPredicted RBP9.76□□□□□ -0.85
CHD9-220ENST00000569794 PRNPP04156 253 aa9.75□□□□□ -0.85
CHD9-220ENST00000569794 USP11P51784 963 aa9.75□□□□□ -0.85
CHD9-220ENST00000569794 PEAR1Q5VY43 1037 aaPredicted RBP9.75□□□□□ -0.85
CHD9-220ENST00000569794 LATS2Q9NRM7 1088 aa9.75□□□□□ -0.85
CHD9-220ENST00000569794 CCDC39Q9UFE4 941 aa9.75□□□□□ -0.85
CHD9-220ENST00000569794 SERPINA10Q9UK55 444 aa9.75□□□□□ -0.85
CHD9-220ENST00000569794 NPR3P17342 541 aa9.74□□□□□ -0.85
CHD9-220ENST00000569794 GSTM4Q03013 218 aa9.74□□□□□ -0.85
CHD9-220ENST00000569794 EHHADHQ08426 723 aa9.74□□□□□ -0.85
CHD9-220ENST00000569794 NFXL1Q6ZNB6 911 aa9.74□□□□□ -0.85
CHD9-220ENST00000569794 METTL22Q9BUU2 404 aaPredicted RBP9.74□□□□□ -0.85
CHD9-220ENST00000569794 USP5P45974 858 aa9.73□□□□□ -0.85
CHD9-220ENST00000569794 SOX4Q06945 474 aaPredicted RBP9.73□□□□□ -0.85
CHD9-220ENST00000569794 EZH1Q92800 747 aaPredicted RBP9.73□□□□□ -0.85
CHD9-220ENST00000569794 NRSN2Q9GZP1 204 aa9.73□□□□□ -0.85
CHD9-220ENST00000569794 SSFA2P28290 1259 aa9.72□□□□□ -0.85
CHD9-220ENST00000569794 ADMP35318 185 aa9.72□□□□□ -0.85
CHD9-220ENST00000569794 AAMPQ13685 434 aa9.72□□□□□ -0.85
CHD9-220ENST00000569794 ZAR1Q86SH2 424 aa9.72□□□□□ -0.85
CHD9-220ENST00000569794 VSIG10LQ86VR7 867 aa9.72□□□□□ -0.85
CHD9-220ENST00000569794 PRKAG2Q9UGJ0 569 aa9.72□□□□□ -0.85
CHD9-220ENST00000569794 AMOTL2Q9Y2J4 779 aa9.72□□□□□ -0.85
CHD9-220ENST00000569794 METTL12A8MUP2 240 aa9.71□□□□□ -0.86
CHD9-220ENST00000569794 CBLL1Q75N03 491 aa9.71□□□□□ -0.86
CHD9-220ENST00000569794 FBXL18Q96ME1 805 aa9.71□□□□□ -0.86
CHD9-220ENST00000569794 EIF4EBP3O60516 100 aaPredicted RBP9.7□□□□□ -0.86
CHD9-220ENST00000569794 TBC1D32Q96NH3 1257 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms