RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 DNAJC5GQ8N7S2 189 aa17.16■□□□□ 0.34
HERPUD1-218ENST00000569569 HDAC9Q9UKV0 1011 aa17.16■□□□□ 0.34
HERPUD1-218ENST00000569569 FAM205AQ6ZU69 1335 aa17.16■□□□□ 0.34
HERPUD1-218ENST00000569569 TMEM88BA6NKF7 163 aa17.15■□□□□ 0.34
HERPUD1-218ENST00000569569 KIAA0825Q8IV33 1275 aa17.15■□□□□ 0.34
HERPUD1-218ENST00000569569 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.15■□□□□ 0.34
HERPUD1-218ENST00000569569 DCPSQ96C86 337 aaKnown RBP17.15■□□□□ 0.34
HERPUD1-218ENST00000569569 YTHDC1Q96MU7 727 aaKnown RBP17.15■□□□□ 0.34
HERPUD1-218ENST00000569569 BCAMP50895 628 aa17.14■□□□□ 0.33
HERPUD1-218ENST00000569569 SCARF1Q14162 830 aa17.14■□□□□ 0.33
HERPUD1-218ENST00000569569 MVPQ14764 893 aaKnown RBP17.14■□□□□ 0.33
HERPUD1-218ENST00000569569 ATP2B3Q16720 1220 aa17.14■□□□□ 0.33
HERPUD1-218ENST00000569569 CERS5Q8N5B7 392 aa17.14■□□□□ 0.33
HERPUD1-218ENST00000569569 GLIS2Q9BZE0 524 aaPredicted RBP17.14■□□□□ 0.33
HERPUD1-218ENST00000569569 C1orf115Q9H7X2 142 aa17.14■□□□□ 0.33
HERPUD1-218ENST00000569569 ECM29Q5VYK3 1845 aa17.14■□□□□ 0.33
HERPUD1-218ENST00000569569 ARAP2Q8WZ64 1704 aa17.13■□□□□ 0.33
HERPUD1-218ENST00000569569 TRAF5O00463 557 aa17.13■□□□□ 0.33
HERPUD1-218ENST00000569569 FRAT2O75474 233 aaPredicted RBP17.13■□□□□ 0.33
HERPUD1-218ENST00000569569 G3BP1Q13283 466 aaKnown RBP eCLIP17.13■□□□□ 0.336e-10■□□□□ 10.8
HERPUD1-218ENST00000569569 POLA2Q14181 598 aa17.13■□□□□ 0.33
HERPUD1-218ENST00000569569 SSH3Q8TE77 659 aa17.13■□□□□ 0.33
HERPUD1-218ENST00000569569 DDX19BQ9UMR2 479 aa17.13■□□□□ 0.33
HERPUD1-218ENST00000569569 JAG2Q9Y219 1238 aa17.13■□□□□ 0.33
HERPUD1-218ENST00000569569 FMR1Q06787 632 aaKnown RBP eCLIP17.12■□□□□ 0.33
HERPUD1-218ENST00000569569 PDE3AQ14432 1141 aa17.12■□□□□ 0.33
HERPUD1-218ENST00000569569 MFSD14BQ5SR56 506 aa17.12■□□□□ 0.33
HERPUD1-218ENST00000569569 KRT26Q7Z3Y9 468 aa17.12■□□□□ 0.33
HERPUD1-218ENST00000569569 USP48Q86UV5 1035 aa17.12■□□□□ 0.33
HERPUD1-218ENST00000569569 CNKSR2Q8WXI2 1034 aa17.12■□□□□ 0.33
HERPUD1-218ENST00000569569 KLRG1Q96E93 195 aa17.12■□□□□ 0.33
HERPUD1-218ENST00000569569 CHMP4BQ9H444 224 aaKnown RBP17.12■□□□□ 0.33
HERPUD1-218ENST00000569569 IQSEC3Q9UPP2 1182 aaPredicted RBP17.12■□□□□ 0.33
HERPUD1-218ENST00000569569 AKAP2Q9Y2D5 859 aa17.12■□□□□ 0.33
HERPUD1-218ENST00000569569 COG6Q9Y2V7 657 aa17.12■□□□□ 0.33
HERPUD1-218ENST00000569569 WNT10BO00744 389 aa17.11■□□□□ 0.33
HERPUD1-218ENST00000569569 TFCP2Q12800 502 aa17.11■□□□□ 0.33
HERPUD1-218ENST00000569569 TBC1D22AQ8WUA7 517 aa17.11■□□□□ 0.33
HERPUD1-218ENST00000569569 GGA3Q9NZ52 723 aa17.11■□□□□ 0.33
HERPUD1-218ENST00000569569 F8W031 263 aaPredicted RBP17.1■□□□□ 0.33
HERPUD1-218ENST00000569569 TIMM10P62072 90 aa17.1■□□□□ 0.33
HERPUD1-218ENST00000569569 CHAF1AQ13111 956 aaPredicted RBP17.1■□□□□ 0.33
HERPUD1-218ENST00000569569 NBPF9Q3BBW0 867 aa17.1■□□□□ 0.33
HERPUD1-218ENST00000569569 ANGEL2Q5VTE6 544 aaKnown RBP17.1■□□□□ 0.33
HERPUD1-218ENST00000569569 CST9Q5W186 159 aa17.1■□□□□ 0.33
HERPUD1-218ENST00000569569 SULF1Q8IWU6 871 aa17.1■□□□□ 0.33
HERPUD1-218ENST00000569569 ASTN2O75129 1339 aaPredicted RBP17.1■□□□□ 0.33
HERPUD1-218ENST00000569569 PITPNM2Q9BZ72 1349 aa17.1■□□□□ 0.33
HERPUD1-218ENST00000569569 CELF2O95319 508 aaKnown RBP17.09■□□□□ 0.33
HERPUD1-218ENST00000569569 DLGAP5Q15398 846 aa17.09■□□□□ 0.33
HERPUD1-218ENST00000569569 CEP85Q6P2H3 762 aa17.09■□□□□ 0.33
HERPUD1-218ENST00000569569 MTMR14Q8NCE2 650 aa17.09■□□□□ 0.33
HERPUD1-218ENST00000569569 GNL3LQ9NVN8 582 aaKnown RBP17.09■□□□□ 0.33
HERPUD1-218ENST00000569569 A0A1B0GUL7 405 aa17.08■□□□□ 0.32
HERPUD1-218ENST00000569569 SURF6O75683 361 aaKnown RBP17.08■□□□□ 0.32
HERPUD1-218ENST00000569569 ZBED3Q96IU2 234 aaPredicted RBP17.08■□□□□ 0.32
HERPUD1-218ENST00000569569 ZBTB40Q9NUA8 1239 aa17.08■□□□□ 0.32
HERPUD1-218ENST00000569569 ABT1Q9ULW3 272 aaKnown RBP17.08■□□□□ 0.32
HERPUD1-218ENST00000569569 TTF2Q9UNY4 1162 aaKnown RBP17.08■□□□□ 0.32
HERPUD1-218ENST00000569569 NOP58Q9Y2X3 529 aaKnown RBP17.08■□□□□ 0.32
HERPUD1-218ENST00000569569 ADM5C9JUS6 153 aa17.07■□□□□ 0.32
HERPUD1-218ENST00000569569 ZBTB22O15209 634 aa17.07■□□□□ 0.32
HERPUD1-218ENST00000569569 OS9Q13438 667 aaPredicted RBP17.07■□□□□ 0.32
HERPUD1-218ENST00000569569 DEFB115Q30KQ5 88 aa17.07■□□□□ 0.32
HERPUD1-218ENST00000569569 CFAP100Q494V2 611 aa17.07■□□□□ 0.32
HERPUD1-218ENST00000569569 C20orf194Q5TEA3 1177 aa17.07■□□□□ 0.32
HERPUD1-218ENST00000569569 WDR66Q8TBY9 1149 aa17.07■□□□□ 0.32
HERPUD1-218ENST00000569569 XAGE2Q96GT9 111 aa17.07■□□□□ 0.32
HERPUD1-218ENST00000569569 NEUROD6Q96NK8 337 aa17.07■□□□□ 0.32
HERPUD1-218ENST00000569569 ZNF408Q9H9D4 720 aa17.07■□□□□ 0.32
HERPUD1-218ENST00000569569 MKRN1Q9UHC7 482 aaKnown RBP17.07■□□□□ 0.32
HERPUD1-218ENST00000569569 CNTNAP1P78357 1384 aa17.06■□□□□ 0.32
HERPUD1-218ENST00000569569 SEMA3EO15041 775 aa17.06■□□□□ 0.32
HERPUD1-218ENST00000569569 ADORA1P30542 326 aa17.06■□□□□ 0.32
HERPUD1-218ENST00000569569 PHKA1P46020 1223 aa17.06■□□□□ 0.32
HERPUD1-218ENST00000569569 RBM5P52756 815 aaKnown RBP eCLIP17.06■□□□□ 0.32
HERPUD1-218ENST00000569569 CCDC102BQ68D86 513 aa17.06■□□□□ 0.32
HERPUD1-218ENST00000569569 DLK2Q6UY11 383 aa17.06■□□□□ 0.32
HERPUD1-218ENST00000569569 RPAP2Q8IXW5 612 aaPredicted RBP17.06■□□□□ 0.32
HERPUD1-218ENST00000569569 JMYQ8N9B5 988 aa17.06■□□□□ 0.32
HERPUD1-218ENST00000569569 RNF39Q9H2S5 420 aa17.06■□□□□ 0.32
HERPUD1-218ENST00000569569 SERPINA10Q9UK55 444 aa17.06■□□□□ 0.32
HERPUD1-218ENST00000569569 DENND2AQ9ULE3 1009 aa17.06■□□□□ 0.32
HERPUD1-218ENST00000569569 SUGT1Q9Y2Z0 365 aa17.06■□□□□ 0.32
HERPUD1-218ENST00000569569 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.06■□□□□ 0.32
HERPUD1-218ENST00000569569 RASSF10A6NK89 507 aa17.05■□□□□ 0.32
HERPUD1-218ENST00000569569 MYO1BO43795 1136 aa17.05■□□□□ 0.32
HERPUD1-218ENST00000569569 PRMT6Q96LA8 375 aaPredicted RBP17.05■□□□□ 0.32
HERPUD1-218ENST00000569569 GPR108Q9NPR9 543 aa17.05■□□□□ 0.32
HERPUD1-218ENST00000569569 TLL2Q9Y6L7 1015 aa17.05■□□□□ 0.32
HERPUD1-218ENST00000569569 SPDYE2BA6NHP3 402 aa17.04■□□□□ 0.32
HERPUD1-218ENST00000569569 SPDYE6P0CI01 402 aa17.04■□□□□ 0.32
HERPUD1-218ENST00000569569 HDLBPQ00341 1268 aaKnown RBP17.04■□□□□ 0.32
HERPUD1-218ENST00000569569 GRIK5Q16478 980 aa17.04■□□□□ 0.32
HERPUD1-218ENST00000569569 SAPCD2Q86UD0 394 aa17.04■□□□□ 0.32
HERPUD1-218ENST00000569569 APOBEC3FQ8IUX4 373 aaKnown RBP17.04■□□□□ 0.32
HERPUD1-218ENST00000569569 CDCA5Q96FF9 252 aa17.04■□□□□ 0.32
HERPUD1-218ENST00000569569 MRIQ9BWK5 157 aa17.04■□□□□ 0.32
HERPUD1-218ENST00000569569 PCDHAC2Q9Y5I4 1007 aa17.04■□□□□ 0.32
HERPUD1-218ENST00000569569 MAST3O60307 1309 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms