RNA–Protein interactions for RNA: ENST00000569566.2

MSLN-208, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-208ENST00000569566 CNNM1Q9NRU3 951 aa23.3■■□□□ 1.32
MSLN-208ENST00000569566 ZNF157P51786 506 aaPredicted RBP23.29■■□□□ 1.32
MSLN-208ENST00000569566 FKBP1BP68106 108 aa23.29■■□□□ 1.32
MSLN-208ENST00000569566 TRMT2AQ8IZ69 625 aaKnown RBP23.29■■□□□ 1.32
MSLN-208ENST00000569566 PCDHAC2Q9Y5I4 1007 aa23.29■■□□□ 1.32
MSLN-208ENST00000569566 AOX1Q06278 1338 aa23.29■■□□□ 1.32
MSLN-208ENST00000569566 MMP14P50281 582 aa23.27■■□□□ 1.32
MSLN-208ENST00000569566 KIF23Q02241 960 aaPredicted RBP23.27■■□□□ 1.32
MSLN-208ENST00000569566 CCDC102AQ96A19 550 aa23.27■■□□□ 1.32
MSLN-208ENST00000569566 JAG2Q9Y219 1238 aa23.27■■□□□ 1.32
MSLN-208ENST00000569566 RIPOR2Q9Y4F9 1068 aa23.27■■□□□ 1.32
MSLN-208ENST00000569566 PLIN1O60240 522 aa23.26■■□□□ 1.31
MSLN-208ENST00000569566 FKBP1AP62942 108 aaKnown RBP23.26■■□□□ 1.31
MSLN-208ENST00000569566 ALDH1L2Q3SY69 923 aa23.26■■□□□ 1.31
MSLN-208ENST00000569566 APOBEC3FQ8IUX4 373 aaKnown RBP23.26■■□□□ 1.31
MSLN-208ENST00000569566 VGLL2Q8N8G2 317 aa23.26■■□□□ 1.31
MSLN-208ENST00000569566 MTMR14Q8NCE2 650 aa23.26■■□□□ 1.31
MSLN-208ENST00000569566 ABHD8Q96I13 439 aa23.26■■□□□ 1.31
MSLN-208ENST00000569566 HDAC9Q9UKV0 1011 aa23.26■■□□□ 1.31
MSLN-208ENST00000569566 FAM205AQ6ZU69 1335 aa23.26■■□□□ 1.31
MSLN-208ENST00000569566 UBE4AQ14139 1066 aa23.25■■□□□ 1.31
MSLN-208ENST00000569566 USP44Q9H0E7 712 aa23.25■■□□□ 1.31
MSLN-208ENST00000569566 GYG1P46976 350 aa23.24■■□□□ 1.31
MSLN-208ENST00000569566 LRRC24Q50LG9 513 aa23.24■■□□□ 1.31
MSLN-208ENST00000569566 SMC4Q9NTJ3 1288 aa23.24■■□□□ 1.31
MSLN-208ENST00000569566 SAGE1Q9NXZ1 904 aa23.24■■□□□ 1.31
MSLN-208ENST00000569566 SPDYE2BA6NHP3 402 aa23.23■■□□□ 1.31
MSLN-208ENST00000569566 CCER2I3L3R5 266 aa23.23■■□□□ 1.31
MSLN-208ENST00000569566 SPDYE6P0CI01 402 aa23.23■■□□□ 1.31
MSLN-208ENST00000569566 TDRD7Q8NHU6 1098 aaKnown RBP23.23■■□□□ 1.31
MSLN-208ENST00000569566 KLHDC4Q8TBB5 520 aa23.23■■□□□ 1.31
MSLN-208ENST00000569566 MROH5Q6ZUA9 1318 aa23.23■■□□□ 1.31
MSLN-208ENST00000569566 F8W031 263 aaPredicted RBP23.22■■□□□ 1.31
MSLN-208ENST00000569566 UBE2Q2LH0YL09 131 aa23.22■■□□□ 1.31
MSLN-208ENST00000569566 FAM84BQ96KN1 310 aaPredicted RBP23.22■■□□□ 1.31
MSLN-208ENST00000569566 DOCK2Q92608 1830 aa23.22■■□□□ 1.31
MSLN-208ENST00000569566 DLGAP5Q15398 846 aa23.21■■□□□ 1.31
MSLN-208ENST00000569566 CFAP100Q494V2 611 aa23.21■■□□□ 1.31
MSLN-208ENST00000569566 CSRNP1Q96S65 589 aa23.21■■□□□ 1.31
MSLN-208ENST00000569566 MYH2Q9UKX2 1941 aa23.2■■□□□ 1.3
MSLN-208ENST00000569566 RFX5P48382 616 aaPredicted RBP23.2■■□□□ 1.3
MSLN-208ENST00000569566 CLRN2A0PK11 232 aa23.19■■□□□ 1.3
MSLN-208ENST00000569566 MFSD14BQ5SR56 506 aa23.19■■□□□ 1.3
MSLN-208ENST00000569566 RNF186Q9NXI6 227 aa23.19■■□□□ 1.3
MSLN-208ENST00000569566 FZD1Q9UP38 647 aa23.19■■□□□ 1.3
MSLN-208ENST00000569566 HIBADHP31937 336 aaKnown RBP23.18■■□□□ 1.3
MSLN-208ENST00000569566 NF2P35240 595 aa23.18■■□□□ 1.3
MSLN-208ENST00000569566 PRMT6Q96LA8 375 aaPredicted RBP23.18■■□□□ 1.3
MSLN-208ENST00000569566 DEFB129Q9H1M3 183 aa23.18■■□□□ 1.3
MSLN-208ENST00000569566 CT47B1P0C2W7 299 aaPredicted RBP23.17■■□□□ 1.3
MSLN-208ENST00000569566 GRIK5Q16478 980 aa23.17■■□□□ 1.3
MSLN-208ENST00000569566 METTL24Q5JXM2 366 aa23.17■■□□□ 1.3
MSLN-208ENST00000569566 MCOLN1Q9GZU1 580 aa23.17■■□□□ 1.3
MSLN-208ENST00000569566 KIF16BQ96L93 1317 aa23.16■■□□□ 1.3
MSLN-208ENST00000569566 TRPA1O75762 1119 aa23.16■■□□□ 1.3
MSLN-208ENST00000569566 PDE8BO95263 885 aa23.16■■□□□ 1.3
MSLN-208ENST00000569566 TTLL12Q14166 644 aaPredicted RBP23.16■■□□□ 1.3
MSLN-208ENST00000569566 FBXO33Q7Z6M2 555 aa23.16■■□□□ 1.3
MSLN-208ENST00000569566 IQSEC3Q9UPP2 1182 aaPredicted RBP23.16■■□□□ 1.3
MSLN-208ENST00000569566 PPP2R3BQ9Y5P8 575 aa23.16■■□□□ 1.3
MSLN-208ENST00000569566 AK9Q5TCS8 1911 aa23.16■■□□□ 1.3
MSLN-208ENST00000569566 FGFR2P21802 821 aa23.15■■□□□ 1.3
MSLN-208ENST00000569566 PTPN12Q05209 780 aaKnown RBP23.15■■□□□ 1.3
MSLN-208ENST00000569566 PRKG1Q13976 671 aa23.15■■□□□ 1.3
MSLN-208ENST00000569566 LDLRAD1Q5T700 205 aa23.15■■□□□ 1.3
MSLN-208ENST00000569566 MAP3K11Q16584 847 aa23.14■■□□□ 1.29
MSLN-208ENST00000569566 SPDYE2Q495Y8 402 aa23.14■■□□□ 1.29
MSLN-208ENST00000569566 ANGEL1Q9UNK9 670 aaKnown RBP23.14■■□□□ 1.29
MSLN-208ENST00000569566 TTF2Q9UNY4 1162 aaKnown RBP23.14■■□□□ 1.29
MSLN-208ENST00000569566 HTTP42858 3142 aa23.14■■□□□ 1.29
MSLN-208ENST00000569566 ARMC9Q7Z3E5 817 aa23.13■■□□□ 1.29
MSLN-208ENST00000569566 VEZTQ9HBM0 779 aa23.13■■□□□ 1.29
MSLN-208ENST00000569566 SERPINA10Q9UK55 444 aa23.13■■□□□ 1.29
MSLN-208ENST00000569566 NOB1Q9ULX3 412 aaKnown RBP23.13■■□□□ 1.29
MSLN-208ENST00000569566 TNRC18O15417 2968 aaPredicted RBP23.12■■□□□ 1.29
MSLN-208ENST00000569566 EYA2O00167 538 aa23.12■■□□□ 1.29
MSLN-208ENST00000569566 RARSP54136 660 aaKnown RBP23.12■■□□□ 1.29
MSLN-208ENST00000569566 DGKZQ13574 1117 aa23.12■■□□□ 1.29
MSLN-208ENST00000569566 PUM3Q15397 648 aaKnown RBP23.12■■□□□ 1.29
MSLN-208ENST00000569566 ATG9AQ7Z3C6 839 aa23.12■■□□□ 1.29
MSLN-208ENST00000569566 CDAN1Q8IWY9 1227 aa23.12■■□□□ 1.29
MSLN-208ENST00000569566 REM2Q8IYK8 340 aaPredicted RBP23.12■■□□□ 1.29
MSLN-208ENST00000569566 MAST2Q6P0Q8 1798 aa23.12■■□□□ 1.29
MSLN-208ENST00000569566 MYO1BO43795 1136 aa23.11■■□□□ 1.29
MSLN-208ENST00000569566 UBTFL1P0CB47 393 aaPredicted RBP23.11■■□□□ 1.29
MSLN-208ENST00000569566 MKRN3Q13064 507 aaKnown RBP23.11■■□□□ 1.29
MSLN-208ENST00000569566 CLMNQ96JQ2 1002 aa23.11■■□□□ 1.29
MSLN-208ENST00000569566 ZSWIM8A7E2V4 1837 aa23.1■■□□□ 1.29
MSLN-208ENST00000569566 PTPRFP10586 1907 aa23.1■■□□□ 1.29
MSLN-208ENST00000569566 RBBP6Q7Z6E9 1792 aaKnown RBP23.1■■□□□ 1.29
MSLN-208ENST00000569566 CRKP46108 304 aa23.1■■□□□ 1.29
MSLN-208ENST00000569566 CHAF1AQ13111 956 aaPredicted RBP23.1■■□□□ 1.29
MSLN-208ENST00000569566 NBPF12Q5TAG4 269 aaPredicted RBP23.1■■□□□ 1.29
MSLN-208ENST00000569566 MEIS3Q99687 375 aa23.1■■□□□ 1.29
MSLN-208ENST00000569566 ZNF70Q9UC06 446 aaPredicted RBP23.1■■□□□ 1.29
MSLN-208ENST00000569566 CDK5RAP2Q96SN8 1893 aa23.1■■□□□ 1.29
MSLN-208ENST00000569566 MYO5AQ9Y4I1 1855 aaKnown RBP23.1■■□□□ 1.29
MSLN-208ENST00000569566 PDE4DIPQ5VU43 2346 aa23.09■■□□□ 1.29
MSLN-208ENST00000569566 BCAMP50895 628 aa23.09■■□□□ 1.29
MSLN-208ENST00000569566 RBM5P52756 815 aaKnown RBP eCLIP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms