RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8□□□□□ -1.13
CNOT1-216ENST00000569240 IBSPP21815 317 aaPredicted RBP8□□□□□ -1.13
CNOT1-216ENST00000569240 BAIAP2L1Q9UHR4 511 aa8□□□□□ -1.13
CNOT1-216ENST00000569240 TRAF1Q13077 416 aa8□□□□□ -1.13
CNOT1-216ENST00000569240 TTC39AQ5SRH9 613 aa8□□□□□ -1.13
CNOT1-216ENST00000569240 MCUR1Q96AQ8 359 aa8□□□□□ -1.13
CNOT1-216ENST00000569240 TSPYL2Q9H2G4 693 aaPredicted RBP8□□□□□ -1.13
CNOT1-216ENST00000569240 RIPOR2Q9Y4F9 1068 aa8□□□□□ -1.13
CNOT1-216ENST00000569240 PPP1R12AO14974 1030 aaPredicted RBP8□□□□□ -1.13
CNOT1-216ENST00000569240 CFAP221Q4G0U5 840 aa8□□□□□ -1.13
CNOT1-216ENST00000569240 SRGAP1Q7Z6B7 1085 aa8□□□□□ -1.13
CNOT1-216ENST00000569240 TSR2Q969E8 191 aaKnown RBP8□□□□□ -1.13
CNOT1-216ENST00000569240 CALML4Q96GE6 196 aa8□□□□□ -1.13
CNOT1-216ENST00000569240 KLHL14Q9P2G3 628 aa8□□□□□ -1.13
CNOT1-216ENST00000569240 ATAD2BQ9ULI0 1458 aa8□□□□□ -1.13
CNOT1-216ENST00000569240 RRP36Q96EU6 259 aaKnown RBP8□□□□□ -1.13
CNOT1-216ENST00000569240 RAB17Q9H0T7 212 aa8□□□□□ -1.13
CNOT1-216ENST00000569240 EIF2S2P20042 333 aaKnown RBP8□□□□□ -1.13
CNOT1-216ENST00000569240 IARSP41252 1262 aaKnown RBP8□□□□□ -1.13
CNOT1-216ENST00000569240 GNGT1P63211 74 aa8□□□□□ -1.13
CNOT1-216ENST00000569240 MUM1Q2TAK8 710 aa8□□□□□ -1.13
CNOT1-216ENST00000569240 NBPF14Q5TI25 921 aa8□□□□□ -1.13
CNOT1-216ENST00000569240 PNMA8AQ86V59 439 aaPredicted RBP8□□□□□ -1.13
CNOT1-216ENST00000569240 UHRF1BP1Q6BDS2 1440 aa8□□□□□ -1.13
CNOT1-216ENST00000569240 SDSP20132 328 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 PPP1R14CQ8TAE6 165 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 STAG1Q8WVM7 1258 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 TBC1D5Q92609 795 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 TSC22D3Q99576 134 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 CDC23Q9UJX2 597 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 HNRNPH2P55795 449 aaKnown RBP7.99□□□□□ -1.13
CNOT1-216ENST00000569240 BICDL1Q6ZP65 573 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 CCDC63Q8NA47 563 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 TRIM58Q8NG06 486 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 ZSWIM4Q9H7M6 989 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 IGSF3O75054 1194 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 ZFXP17010 805 aaPredicted RBP7.99□□□□□ -1.13
CNOT1-216ENST00000569240 PDE1AP54750 535 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 NLRP12P59046 1061 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 NBPF20Q3BBV1 942 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 SYCE1Q8N0S2 351 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 C1orf115Q9H7X2 142 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 CBX8Q9HC52 389 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 ORC3Q9UBD5 711 aaPredicted RBP7.99□□□□□ -1.13
CNOT1-216ENST00000569240 ASXL1Q8IXJ9 1541 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 CNGA1P29973 690 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 CCDC122Q5T0U0 273 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 SCAF11Q99590 1463 aaKnown RBP7.99□□□□□ -1.13
CNOT1-216ENST00000569240 THOC2Q8NI27 1593 aaKnown RBP7.99□□□□□ -1.13
CNOT1-216ENST00000569240 CFAP73A6NFT4 308 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 RHOXF2BP0C7M4 288 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 ATP2B1P20020 1258 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 VPS37DQ86XT2 251 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 PDCD7Q8N8D1 485 aaKnown RBP7.99□□□□□ -1.13
CNOT1-216ENST00000569240 PIP4K2CQ8TBX8 421 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 SELENOSQ9BQE4 189 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 RHOXF2Q9BQY4 288 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 CEP126Q9P2H0 1117 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 WDR78Q5VTH9 848 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 TRIM47Q96LD4 638 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 OLFM3Q96PB7 478 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 CENPKQ9BS16 269 aa7.99□□□□□ -1.13
CNOT1-216ENST00000569240 C9orf84Q5VXU9 1444 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 CCDC169A6NNP5 214 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 ST5P78524 1137 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 SIL1Q9H173 461 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 PHACTR2O75167 634 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 GMNNO75496 209 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 RBM6P78332 1123 aaKnown RBP7.98□□□□□ -1.13
CNOT1-216ENST00000569240 RASIP1Q5U651 963 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 GGT6Q6P531 493 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 RAB3IL1Q8TBN0 382 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.98□□□□□ -1.133e-9■□□□□ 10.6
CNOT1-216ENST00000569240 SUN1O94901 812 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 FANCCQ00597 558 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 DNM1Q05193 864 aaKnown RBP7.98□□□□□ -1.13
CNOT1-216ENST00000569240 MAP7D1Q3KQU3 841 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 NOX5Q96PH1 765 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 FAF1Q9UNN5 650 aaPredicted RBP7.98□□□□□ -1.13
CNOT1-216ENST00000569240 TROQ12816 1431 aaPredicted RBP7.98□□□□□ -1.13
CNOT1-216ENST00000569240 NUTM2FA1L443 756 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 ATP2C2O75185 946 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 VIMP08670 466 aaKnown RBP7.98□□□□□ -1.13
CNOT1-216ENST00000569240 TTF1Q15361 905 aaPredicted RBP7.98□□□□□ -1.13
CNOT1-216ENST00000569240 NUTM2GQ5VZR2 741 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 NME8Q8N427 588 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 CCDC197Q8NCU1 140 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 MAPKBP1O60336 1514 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 NOP2P46087 812 aaKnown RBP7.98□□□□□ -1.13
CNOT1-216ENST00000569240 EPHB4P54760 987 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 N4BP2L2Q92802 583 aaPredicted RBP7.98□□□□□ -1.13
CNOT1-216ENST00000569240 GDPD2Q9HCC8 539 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 SAR1BQ9Y6B6 198 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 BLMP54132 1417 aaPredicted RBP7.98□□□□□ -1.13
CNOT1-216ENST00000569240 IDEP14735 1019 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 PPP2R5BQ15173 497 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 CCDC84Q86UT8 332 aaPredicted RBP7.98□□□□□ -1.13
CNOT1-216ENST00000569240 LRRC8AQ8IWT6 810 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 CPLX3Q8WVH0 158 aa7.98□□□□□ -1.13
CNOT1-216ENST00000569240 DRC3Q9H069 523 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms