RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 DLGAP5Q15398 846 aa19.04■□□□□ 0.64
USB1-214ENST00000568848 CFAP100Q494V2 611 aa19.04■□□□□ 0.64
USB1-214ENST00000568848 IFNL1Q8IU54 200 aa19.04■□□□□ 0.64
USB1-214ENST00000568848 PRMT6Q96LA8 375 aaPredicted RBP19.04■□□□□ 0.64
USB1-214ENST00000568848 STK31Q9BXU1 1019 aa19.04■□□□□ 0.64
USB1-214ENST00000568848 PCDH10Q9P2E7 1040 aa19.04■□□□□ 0.64
USB1-214ENST00000568848 F6X3S4 739 aa19.03■□□□□ 0.64
USB1-214ENST00000568848 PLIN1O60240 522 aa19.03■□□□□ 0.64
USB1-214ENST00000568848 CALD1Q05682 793 aaKnown RBP19.03■□□□□ 0.64
USB1-214ENST00000568848 EPHA10Q5JZY3 1008 aa19.03■□□□□ 0.64
USB1-214ENST00000568848 OTOP1Q7RTM1 612 aa19.03■□□□□ 0.64
USB1-214ENST00000568848 CD99L2Q8TCZ2 262 aa19.03■□□□□ 0.64
USB1-214ENST00000568848 CNKSR2Q8WXI2 1034 aa19.03■□□□□ 0.64
USB1-214ENST00000568848 SLC10A4Q96EP9 437 aa19.03■□□□□ 0.64
USB1-214ENST00000568848 CHMP3Q9Y3E7 222 aa19.03■□□□□ 0.64
USB1-214ENST00000568848 SALL2Q9Y467 1007 aaPredicted RBP19.03■□□□□ 0.64
USB1-214ENST00000568848 ECM29Q5VYK3 1845 aa19.02■□□□□ 0.64
USB1-214ENST00000568848 CSF1RP07333 972 aa19.02■□□□□ 0.64
USB1-214ENST00000568848 FLIIQ13045 1269 aa19.02■□□□□ 0.64
USB1-214ENST00000568848 ANKRD2Q9GZV1 360 aa19.02■□□□□ 0.64
USB1-214ENST00000568848 CRHR2Q13324 411 aa19.01■□□□□ 0.63
USB1-214ENST00000568848 FKBP5Q13451 457 aaPredicted RBP19.01■□□□□ 0.63
USB1-214ENST00000568848 PTPN18Q99952 460 aa19.01■□□□□ 0.63
USB1-214ENST00000568848 PLA2G12BQ9BX93 195 aa19.01■□□□□ 0.63
USB1-214ENST00000568848 ZSWIM8A7E2V4 1837 aa19.01■□□□□ 0.63
USB1-214ENST00000568848 FOXO4P98177 505 aa19■□□□□ 0.63
USB1-214ENST00000568848 DNAAF4Q8WXU2 420 aa19■□□□□ 0.63
USB1-214ENST00000568848 ELP3Q9H9T3 547 aa19■□□□□ 0.63
USB1-214ENST00000568848 ANKRD18BA2A2Z9 1011 aa18.99■□□□□ 0.63
USB1-214ENST00000568848 SPDYE2BA6NHP3 402 aa18.99■□□□□ 0.63
USB1-214ENST00000568848 USP2O75604 605 aaPredicted RBP18.99■□□□□ 0.63
USB1-214ENST00000568848 ECM2O94769 699 aaPredicted RBP18.99■□□□□ 0.63
USB1-214ENST00000568848 MYCP01106 439 aaPredicted RBP18.99■□□□□ 0.63
USB1-214ENST00000568848 SPDYE6P0CI01 402 aa18.99■□□□□ 0.63
USB1-214ENST00000568848 RBM5P52756 815 aaKnown RBP eCLIP18.99■□□□□ 0.63
USB1-214ENST00000568848 WWC1Q8IX03 1113 aa18.99■□□□□ 0.63
USB1-214ENST00000568848 CFHR5Q9BXR6 569 aa18.99■□□□□ 0.63
USB1-214ENST00000568848 MANSC4A6NHS7 340 aaPredicted RBP18.98■□□□□ 0.63
USB1-214ENST00000568848 EN2P19622 333 aaPredicted RBP18.98■□□□□ 0.63
USB1-214ENST00000568848 RASA3Q14644 834 aa18.98■□□□□ 0.63
USB1-214ENST00000568848 GRIK5Q16478 980 aa18.98■□□□□ 0.63
USB1-214ENST00000568848 NOM1Q5C9Z4 860 aaKnown RBP18.98■□□□□ 0.63
USB1-214ENST00000568848 FANCIQ9NVI1 1328 aa18.98■□□□□ 0.63
USB1-214ENST00000568848 MAP3K11Q16584 847 aa18.97■□□□□ 0.63
USB1-214ENST00000568848 COL1A1P02452 1464 aaPredicted RBP18.97■□□□□ 0.63
USB1-214ENST00000568848 LAMB1P07942 1786 aa18.96■□□□□ 0.63
USB1-214ENST00000568848 LMBR1LQ6UX01 489 aa18.96■□□□□ 0.63
USB1-214ENST00000568848 LINS1Q8NG48 757 aa18.96■□□□□ 0.63
USB1-214ENST00000568848 TDRD3Q9H7E2 651 aaKnown RBP18.96■□□□□ 0.63
USB1-214ENST00000568848 PTPN22Q9Y2R2 807 aa18.96■□□□□ 0.63
USB1-214ENST00000568848 IL1R1P14778 569 aa18.95■□□□□ 0.62
USB1-214ENST00000568848 GYG1P46976 350 aa18.95■□□□□ 0.62
USB1-214ENST00000568848 MTMR14Q8NCE2 650 aa18.95■□□□□ 0.62
USB1-214ENST00000568848 PUS3Q9BZE2 481 aaKnown RBP18.95■□□□□ 0.62
USB1-214ENST00000568848 MYH16Q9H6N6 1097 aa18.95■□□□□ 0.62
USB1-214ENST00000568848 IQSEC3Q9UPP2 1182 aaPredicted RBP18.95■□□□□ 0.62
USB1-214ENST00000568848 TCP10L2B9ZVM9 353 aa18.94■□□□□ 0.62
USB1-214ENST00000568848 PPP1R12BO60237 982 aaPredicted RBP18.94■□□□□ 0.62
USB1-214ENST00000568848 ZBTB48P10074 688 aaPredicted RBP18.94■□□□□ 0.62
USB1-214ENST00000568848 CACNB3P54284 484 aa18.94■□□□□ 0.62
USB1-214ENST00000568848 EXOSC9Q06265 439 aaKnown RBP18.94■□□□□ 0.62
USB1-214ENST00000568848 IFIT5Q13325 482 aaKnown RBP18.94■□□□□ 0.62
USB1-214ENST00000568848 ZNF804AQ7Z570 1209 aa18.94■□□□□ 0.62
USB1-214ENST00000568848 OPTNQ96CV9 577 aa18.94■□□□□ 0.62
USB1-214ENST00000568848 SPINK5Q9NQ38 1064 aaPredicted RBP18.94■□□□□ 0.62
USB1-214ENST00000568848 ZNF70Q9UC06 446 aaPredicted RBP18.94■□□□□ 0.62
USB1-214ENST00000568848 CEP290O15078 2479 aa18.93■□□□□ 0.62
USB1-214ENST00000568848 VAMP4O75379 141 aa18.93■□□□□ 0.62
USB1-214ENST00000568848 ALDH1A1P00352 501 aa18.93■□□□□ 0.62
USB1-214ENST00000568848 HABP4Q5JVS0 413 aaKnown RBP18.93■□□□□ 0.62
USB1-214ENST00000568848 TMEM39BQ9GZU3 492 aa18.93■□□□□ 0.62
USB1-214ENST00000568848 BEND3Q5T5X7 828 aa18.92■□□□□ 0.62
USB1-214ENST00000568848 C15orf52Q6ZUT6 534 aaKnown RBP18.92■□□□□ 0.62
USB1-214ENST00000568848 BRI3BPQ8WY22 251 aa18.92■□□□□ 0.62
USB1-214ENST00000568848 TEPSINQ96N21 525 aa18.92■□□□□ 0.62
USB1-214ENST00000568848 ARHGAP39Q9C0H5 1083 aa18.92■□□□□ 0.62
USB1-214ENST00000568848 EFCC1Q9HA90 598 aa18.92■□□□□ 0.62
USB1-214ENST00000568848 TTF2Q9UNY4 1162 aaKnown RBP18.92■□□□□ 0.62
USB1-214ENST00000568848 RBBP6Q7Z6E9 1792 aaKnown RBP18.91■□□□□ 0.62
USB1-214ENST00000568848 MYO1BO43795 1136 aa18.91■□□□□ 0.62
USB1-214ENST00000568848 IREB2P48200 963 aaKnown RBP18.91■□□□□ 0.62
USB1-214ENST00000568848 SUPT20HL1Q3ZLR7 823 aa18.91■□□□□ 0.62
USB1-214ENST00000568848 SPDYE2Q495Y8 402 aa18.91■□□□□ 0.62
USB1-214ENST00000568848 MFSD14BQ5SR56 506 aa18.91■□□□□ 0.62
USB1-214ENST00000568848 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.91■□□□□ 0.62
USB1-214ENST00000568848 FAM43AQ8N2R8 423 aa18.91■□□□□ 0.62
USB1-214ENST00000568848 ERO1AQ96HE7 468 aa18.91■□□□□ 0.62
USB1-214ENST00000568848 MS4A4AQ96JQ5 239 aa18.91■□□□□ 0.62
USB1-214ENST00000568848 CNNM1Q9NRU3 951 aa18.91■□□□□ 0.62
USB1-214ENST00000568848 PPP2R3BQ9Y5P8 575 aa18.91■□□□□ 0.62
USB1-214ENST00000568848 PTCH2Q9Y6C5 1203 aa18.91■□□□□ 0.62
USB1-214ENST00000568848 SP3Q02447 781 aa18.9■□□□□ 0.62
USB1-214ENST00000568848 VGLL4Q14135 290 aa18.9■□□□□ 0.62
USB1-214ENST00000568848 TAF7LQ5H9L4 462 aa18.9■□□□□ 0.62
USB1-214ENST00000568848 LDHAL6AQ6ZMR3 332 aa18.9■□□□□ 0.62
USB1-214ENST00000568848 ANKRD13AQ8IZ07 590 aa18.9■□□□□ 0.62
USB1-214ENST00000568848 ARAP2Q8WZ64 1704 aa18.89■□□□□ 0.61
USB1-214ENST00000568848 CHAF1AQ13111 956 aaPredicted RBP18.89■□□□□ 0.61
USB1-214ENST00000568848 OTUD5Q96G74 571 aa18.89■□□□□ 0.61
USB1-214ENST00000568848 TRIOBPQ9H2D6 2365 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms