RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 KLHDC4Q8TBB5 520 aa18.07■□□□□ 0.48
CMTM3-215ENST00000568477 ARHGAP45Q92619 1136 aa18.07■□□□□ 0.48
CMTM3-215ENST00000568477 FAM84BQ96KN1 310 aaPredicted RBP18.07■□□□□ 0.48
CMTM3-215ENST00000568477 PRDM10Q9NQV6 1147 aa18.07■□□□□ 0.48
CMTM3-215ENST00000568477 HDAC5Q9UQL6 1122 aa18.07■□□□□ 0.48
CMTM3-215ENST00000568477 JAG2Q9Y219 1238 aa18.07■□□□□ 0.48
CMTM3-215ENST00000568477 FAM205AQ6ZU69 1335 aa18.06■□□□□ 0.48
CMTM3-215ENST00000568477 PDE8BO95263 885 aa18.06■□□□□ 0.48
CMTM3-215ENST00000568477 NOGQ13253 232 aa18.06■□□□□ 0.48
CMTM3-215ENST00000568477 DLGAP5Q15398 846 aa18.06■□□□□ 0.48
CMTM3-215ENST00000568477 RGMBQ6NW40 437 aa18.06■□□□□ 0.48
CMTM3-215ENST00000568477 TDRD7Q8NHU6 1098 aaKnown RBP18.06■□□□□ 0.48
CMTM3-215ENST00000568477 ZBED3Q96IU2 234 aaPredicted RBP18.06■□□□□ 0.48
CMTM3-215ENST00000568477 F8W031 263 aaPredicted RBP18.05■□□□□ 0.48
CMTM3-215ENST00000568477 EYA2O00167 538 aa18.05■□□□□ 0.48
CMTM3-215ENST00000568477 IPO8O15397 1037 aaKnown RBP18.05■□□□□ 0.48
CMTM3-215ENST00000568477 RFX5P48382 616 aaPredicted RBP18.05■□□□□ 0.48
CMTM3-215ENST00000568477 FKBP1BP68106 108 aa18.05■□□□□ 0.48
CMTM3-215ENST00000568477 VPS37DQ86XT2 251 aa18.05■□□□□ 0.48
CMTM3-215ENST00000568477 APOBEC3FQ8IUX4 373 aaKnown RBP18.05■□□□□ 0.48
CMTM3-215ENST00000568477 VGLL2Q8N8G2 317 aa18.05■□□□□ 0.48
CMTM3-215ENST00000568477 SCAF8Q9UPN6 1271 aaKnown RBP18.05■□□□□ 0.48
CMTM3-215ENST00000568477 HSPA8P11142 646 aaKnown RBP18.04■□□□□ 0.48
CMTM3-215ENST00000568477 ZNF157P51786 506 aaPredicted RBP18.04■□□□□ 0.48
CMTM3-215ENST00000568477 LBX1P52954 281 aa18.04■□□□□ 0.48
CMTM3-215ENST00000568477 PTPN12Q05209 780 aaKnown RBP18.04■□□□□ 0.48
CMTM3-215ENST00000568477 CAVIN4Q5BKX8 364 aa18.04■□□□□ 0.48
CMTM3-215ENST00000568477 MTMR14Q8NCE2 650 aa18.04■□□□□ 0.48
CMTM3-215ENST00000568477 CCDC102AQ96A19 550 aa18.04■□□□□ 0.48
CMTM3-215ENST00000568477 LRRFIP2Q9Y608 721 aaKnown RBP18.04■□□□□ 0.48
CMTM3-215ENST00000568477 NF2P35240 595 aa18.03■□□□□ 0.48
CMTM3-215ENST00000568477 PUM3Q15397 648 aaKnown RBP18.03■□□□□ 0.48
CMTM3-215ENST00000568477 MFSD14BQ5SR56 506 aa18.03■□□□□ 0.48
CMTM3-215ENST00000568477 INTS3Q68E01 1043 aaKnown RBP18.03■□□□□ 0.48
CMTM3-215ENST00000568477 FBXO33Q7Z6M2 555 aa18.03■□□□□ 0.48
CMTM3-215ENST00000568477 MEIS3Q99687 375 aa18.03■□□□□ 0.48
CMTM3-215ENST00000568477 PAPPA2Q9BXP8 1791 aa18.03■□□□□ 0.48
CMTM3-215ENST00000568477 IFIT1P09914 478 aaKnown RBP18.02■□□□□ 0.48
CMTM3-215ENST00000568477 CFAP100Q494V2 611 aa18.02■□□□□ 0.48
CMTM3-215ENST00000568477 PRAMEF18Q5VWM3 479 aa18.02■□□□□ 0.48
CMTM3-215ENST00000568477 FRAT1Q92837 279 aaPredicted RBP18.02■□□□□ 0.48
CMTM3-215ENST00000568477 FBXO3Q9UK99 471 aa18.02■□□□□ 0.48
CMTM3-215ENST00000568477 SPDYE2BA6NHP3 402 aa18.01■□□□□ 0.47
CMTM3-215ENST00000568477 FAM155AB1AL88 458 aaPredicted RBP18.01■□□□□ 0.47
CMTM3-215ENST00000568477 CA12O43570 354 aa18.01■□□□□ 0.47
CMTM3-215ENST00000568477 MYO1BO43795 1136 aa18.01■□□□□ 0.47
CMTM3-215ENST00000568477 FRAT2O75474 233 aaPredicted RBP18.01■□□□□ 0.47
CMTM3-215ENST00000568477 BCAR3O75815 825 aa18.01■□□□□ 0.47
CMTM3-215ENST00000568477 GNAI3P08754 354 aa18.01■□□□□ 0.47
CMTM3-215ENST00000568477 SPDYE6P0CI01 402 aa18.01■□□□□ 0.47
CMTM3-215ENST00000568477 ATF7IPQ6VMQ6 1270 aa18.01■□□□□ 0.47
CMTM3-215ENST00000568477 IQSEC3Q9UPP2 1182 aaPredicted RBP18.01■□□□□ 0.47
CMTM3-215ENST00000568477 COL1A1P02452 1464 aaPredicted RBP18.01■□□□□ 0.47
CMTM3-215ENST00000568477 CIAO1O76071 339 aa18■□□□□ 0.47
CMTM3-215ENST00000568477 SLC10A3P09131 477 aa18■□□□□ 0.47
CMTM3-215ENST00000568477 SLC5A1P13866 664 aa18■□□□□ 0.47
CMTM3-215ENST00000568477 TRIM27P14373 513 aa18■□□□□ 0.47
CMTM3-215ENST00000568477 FGFR2P21802 821 aa18■□□□□ 0.47
CMTM3-215ENST00000568477 RBM5P52756 815 aaKnown RBP eCLIP18■□□□□ 0.47
CMTM3-215ENST00000568477 CHAF1AQ13111 956 aaPredicted RBP18■□□□□ 0.47
CMTM3-215ENST00000568477 TTLL12Q14166 644 aaPredicted RBP18■□□□□ 0.47
CMTM3-215ENST00000568477 ATG9AQ7Z3C6 839 aa18■□□□□ 0.47
CMTM3-215ENST00000568477 ZIC5Q96T25 663 aa18■□□□□ 0.47
CMTM3-215ENST00000568477 SIL1Q9H173 461 aa18■□□□□ 0.47
CMTM3-215ENST00000568477 TTF2Q9UNY4 1162 aaKnown RBP18■□□□□ 0.47
CMTM3-215ENST00000568477 PCDHAC2Q9Y5I4 1007 aa18■□□□□ 0.47
CMTM3-215ENST00000568477 BCAMP50895 628 aa17.99■□□□□ 0.47
CMTM3-215ENST00000568477 MOB2Q70IA6 237 aa17.99■□□□□ 0.47
CMTM3-215ENST00000568477 TBC1D22AQ8WUA7 517 aa17.99■□□□□ 0.47
CMTM3-215ENST00000568477 LPIN2Q92539 896 aa17.99■□□□□ 0.47
CMTM3-215ENST00000568477 PRMT6Q96LA8 375 aaPredicted RBP17.99■□□□□ 0.47
CMTM3-215ENST00000568477 DEFB129Q9H1M3 183 aa17.99■□□□□ 0.47
CMTM3-215ENST00000568477 ARAP2Q8WZ64 1704 aa17.98■□□□□ 0.47
CMTM3-215ENST00000568477 CLRN2A0PK11 232 aa17.98■□□□□ 0.47
CMTM3-215ENST00000568477 UBE2Q2LH0YL09 131 aa17.98■□□□□ 0.47
CMTM3-215ENST00000568477 KIF23Q02241 960 aaPredicted RBP17.98■□□□□ 0.47
CMTM3-215ENST00000568477 RASAL3Q86YV0 1011 aa17.98■□□□□ 0.47
CMTM3-215ENST00000568477 VEZTQ9HBM0 779 aa17.98■□□□□ 0.47
CMTM3-215ENST00000568477 CEP126Q9P2H0 1117 aa17.98■□□□□ 0.47
CMTM3-215ENST00000568477 SERPINA10Q9UK55 444 aa17.98■□□□□ 0.47
CMTM3-215ENST00000568477 PPP2R3BQ9Y5P8 575 aa17.98■□□□□ 0.47
CMTM3-215ENST00000568477 ZBED9Q6R2W3 1325 aa17.98■□□□□ 0.47
CMTM3-215ENST00000568477 IL15P40933 162 aaPredicted RBP17.97■□□□□ 0.47
CMTM3-215ENST00000568477 ATP2B3Q16720 1220 aa17.97■□□□□ 0.47
CMTM3-215ENST00000568477 ZKSCAN2Q63HK3 967 aa17.97■□□□□ 0.47
CMTM3-215ENST00000568477 ARMC9Q7Z3E5 817 aa17.97■□□□□ 0.47
CMTM3-215ENST00000568477 CLUAP1Q96AJ1 413 aa17.97■□□□□ 0.47
CMTM3-215ENST00000568477 COPRSQ9NQ92 184 aa17.97■□□□□ 0.47
CMTM3-215ENST00000568477 TSKSQ9UJT2 592 aa17.97■□□□□ 0.47
CMTM3-215ENST00000568477 PA2G4Q9UQ80 394 aaKnown RBP17.97■□□□□ 0.47
CMTM3-215ENST00000568477 TNNQ9UQP3 1299 aa17.97■□□□□ 0.47
CMTM3-215ENST00000568477 ECM29Q5VYK3 1845 aa17.97■□□□□ 0.47
CMTM3-215ENST00000568477 AOX1Q06278 1338 aa17.96■□□□□ 0.46
CMTM3-215ENST00000568477 SRGAP3O43295 1099 aa17.95■□□□□ 0.46
CMTM3-215ENST00000568477 CRKP46108 304 aa17.95■□□□□ 0.46
CMTM3-215ENST00000568477 MTX1Q13505 466 aa17.95■□□□□ 0.46
CMTM3-215ENST00000568477 PRKG1Q13976 671 aa17.95■□□□□ 0.46
CMTM3-215ENST00000568477 SPDYE2Q495Y8 402 aa17.95■□□□□ 0.46
CMTM3-215ENST00000568477 GNAI2P04899 355 aa17.94■□□□□ 0.46
CMTM3-215ENST00000568477 HDLBPQ00341 1268 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms