RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 RNF208Q9H0X6 261 aa12.52□□□□□ -0.41
KARS-209ENST00000568378 BIN2Q9UBW5 565 aaPredicted RBP12.52□□□□□ -0.41
KARS-209ENST00000568378 MYO1BO43795 1136 aa12.51□□□□□ -0.41
KARS-209ENST00000568378 USP2O75604 605 aaPredicted RBP12.51□□□□□ -0.41
KARS-209ENST00000568378 CCL5P13501 91 aa12.51□□□□□ -0.41
KARS-209ENST00000568378 GTF2A2P52657 109 aa12.51□□□□□ -0.41
KARS-209ENST00000568378 NBPF12Q5TAG4 269 aaPredicted RBP12.51□□□□□ -0.41
KARS-209ENST00000568378 TTLL5Q6EMB2 1281 aa12.51□□□□□ -0.41
KARS-209ENST00000568378 RAET1EQ8TD07 263 aa12.51□□□□□ -0.41
KARS-209ENST00000568378 ZBED3Q96IU2 234 aaPredicted RBP12.51□□□□□ -0.41
KARS-209ENST00000568378 MS4A4AQ96JQ5 239 aa12.51□□□□□ -0.41
KARS-209ENST00000568378 COA1Q9GZY4 146 aa12.51□□□□□ -0.41
KARS-209ENST00000568378 VEZTQ9HBM0 779 aa12.51□□□□□ -0.41
KARS-209ENST00000568378 ZSWIM8A7E2V4 1837 aa12.51□□□□□ -0.41
KARS-209ENST00000568378 CLRN2A0PK11 232 aa12.5□□□□□ -0.41
KARS-209ENST00000568378 GRK4P32298 578 aa12.5□□□□□ -0.41
KARS-209ENST00000568378 UBXN2AP68543 259 aa12.5□□□□□ -0.41
KARS-209ENST00000568378 NFE2L2Q16236 605 aa12.5□□□□□ -0.41
KARS-209ENST00000568378 FAM43AQ8N2R8 423 aa12.5□□□□□ -0.41
KARS-209ENST00000568378 PRDM6Q9NQX0 595 aa12.5□□□□□ -0.41
KARS-209ENST00000568378 MTMR10Q9NXD2 777 aa12.5□□□□□ -0.41
KARS-209ENST00000568378 ZNF804BA4D1E1 1349 aa12.5□□□□□ -0.41
KARS-209ENST00000568378 TLR2O60603 784 aa12.49□□□□□ -0.41
KARS-209ENST00000568378 HOXD10P28358 340 aa12.49□□□□□ -0.41
KARS-209ENST00000568378 ZBTB38Q8NAP3 1195 aaPredicted RBP12.49□□□□□ -0.41
KARS-209ENST00000568378 U2AF1L4Q8WU68 220 aaKnown RBP12.49□□□□□ -0.41
KARS-209ENST00000568378 TRIM47Q96LD4 638 aa12.49□□□□□ -0.41
KARS-209ENST00000568378 CHPF2Q9P2E5 772 aa12.49□□□□□ -0.41
KARS-209ENST00000568378 RIPOR2Q9Y4F9 1068 aa12.49□□□□□ -0.41
KARS-209ENST00000568378 GTF2IP78347 998 aa12.48□□□□□ -0.41
KARS-209ENST00000568378 SRRDQ9UH36 339 aa12.48□□□□□ -0.41
KARS-209ENST00000568378 OTOFQ9HC10 1997 aa12.47□□□□□ -0.41
KARS-209ENST00000568378 MAPK8IP3Q9UPT6 1336 aa12.47□□□□□ -0.41
KARS-209ENST00000568378 PDE8AO60658 829 aa12.47□□□□□ -0.41
KARS-209ENST00000568378 BMP8BP34820 402 aa12.47□□□□□ -0.41
KARS-209ENST00000568378 PSMC4P43686 418 aa12.47□□□□□ -0.41
KARS-209ENST00000568378 CCT4P50991 539 aaKnown RBP12.47□□□□□ -0.41
KARS-209ENST00000568378 CDC5LQ99459 802 aaKnown RBP12.47□□□□□ -0.41
KARS-209ENST00000568378 MYPNQ86TC9 1320 aa12.46□□□□□ -0.41
KARS-209ENST00000568378 FMNL1O95466 1100 aaPredicted RBP12.46□□□□□ -0.41
KARS-209ENST00000568378 TRIM28Q13263 835 aaKnown RBP12.46□□□□□ -0.41
KARS-209ENST00000568378 RASA3Q14644 834 aa12.46□□□□□ -0.41
KARS-209ENST00000568378 LRIT3Q3SXY7 679 aa12.46□□□□□ -0.41
KARS-209ENST00000568378 CFAP100Q494V2 611 aa12.46□□□□□ -0.41
KARS-209ENST00000568378 MTMR14Q8NCE2 650 aa12.46□□□□□ -0.41
KARS-209ENST00000568378 HELBQ8NG08 1087 aaPredicted RBP12.46□□□□□ -0.41
KARS-209ENST00000568378 GDF15Q99988 308 aa12.46□□□□□ -0.41
KARS-209ENST00000568378 PCDHAC2Q9Y5I4 1007 aa12.46□□□□□ -0.41
KARS-209ENST00000568378 CSADQ9Y600 493 aa12.46□□□□□ -0.41
KARS-209ENST00000568378 ECM29Q5VYK3 1845 aa12.46□□□□□ -0.42
KARS-209ENST00000568378 RPTORQ8N122 1335 aa12.45□□□□□ -0.42
KARS-209ENST00000568378 F8W031 263 aaPredicted RBP12.45□□□□□ -0.42
KARS-209ENST00000568378 SGPL1O95470 568 aa12.45□□□□□ -0.42
KARS-209ENST00000568378 TFRCP02786 760 aaKnown RBP12.45□□□□□ -0.42
KARS-209ENST00000568378 CETPP11597 493 aa12.45□□□□□ -0.42
KARS-209ENST00000568378 OSBPP22059 807 aa12.45□□□□□ -0.42
KARS-209ENST00000568378 PPP2R1AP30153 589 aa12.45□□□□□ -0.42
KARS-209ENST00000568378 BCAMP50895 628 aa12.45□□□□□ -0.42
KARS-209ENST00000568378 VGLL4Q14135 290 aa12.45□□□□□ -0.42
KARS-209ENST00000568378 HDGFL1Q5TGJ6 251 aa12.45□□□□□ -0.42
KARS-209ENST00000568378 TXNRD3Q86VQ6 643 aa12.45□□□□□ -0.42
KARS-209ENST00000568378 ZCCHC17Q9NP64 241 aaKnown RBP12.45□□□□□ -0.42
KARS-209ENST00000568378 BABAM1Q9NWV8 329 aa12.45□□□□□ -0.42
KARS-209ENST00000568378 MINPP1Q9UNW1 487 aa12.45□□□□□ -0.42
KARS-209ENST00000568378 SPDYE2BA6NHP3 402 aa12.44□□□□□ -0.42
KARS-209ENST00000568378 BTBD19C9JJ37 291 aa12.44□□□□□ -0.42
KARS-209ENST00000568378 SPDYE6P0CI01 402 aa12.44□□□□□ -0.42
KARS-209ENST00000568378 RBM5P52756 815 aaKnown RBP eCLIP12.44□□□□□ -0.42
KARS-209ENST00000568378 TNFAIP1Q13829 316 aa12.44□□□□□ -0.42
KARS-209ENST00000568378 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.44□□□□□ -0.42
KARS-209ENST00000568378 RIC3Q7Z5B4 369 aa12.44□□□□□ -0.42
KARS-209ENST00000568378 C7orf61Q8IZ16 206 aa12.44□□□□□ -0.42
KARS-209ENST00000568378 TDHQ8IZJ6 230 aa12.44□□□□□ -0.42
KARS-209ENST00000568378 JARID2Q92833 1246 aaPredicted RBP12.44□□□□□ -0.42
KARS-209ENST00000568378 UNC93B1Q9H1C4 597 aa12.44□□□□□ -0.42
KARS-209ENST00000568378 BSDC1Q9NW68 430 aaPredicted RBP12.44□□□□□ -0.42
KARS-209ENST00000568378 CPA4Q9UI42 421 aa12.44□□□□□ -0.42
KARS-209ENST00000568378 ZMYND8Q9ULU4 1186 aaPredicted RBP12.44□□□□□ -0.42
KARS-209ENST00000568378 PCCAP05165 728 aaPredicted RBP12.43□□□□□ -0.42
KARS-209ENST00000568378 COL9A1P20849 921 aa12.43□□□□□ -0.42
KARS-209ENST00000568378 CTGFP29279 349 aa12.43□□□□□ -0.42
KARS-209ENST00000568378 MAP3K9P80192 1104 aa12.43□□□□□ -0.42
KARS-209ENST00000568378 SLAIN1Q8ND83 568 aa12.43□□□□□ -0.42
KARS-209ENST00000568378 PRMT6Q96LA8 375 aaPredicted RBP12.43□□□□□ -0.42
KARS-209ENST00000568378 PLEKHF1Q96S99 279 aa12.43□□□□□ -0.42
KARS-209ENST00000568378 DBF4Q9UBU7 674 aaPredicted RBP12.43□□□□□ -0.42
KARS-209ENST00000568378 LEMD3Q9Y2U8 911 aa12.43□□□□□ -0.42
KARS-209ENST00000568378 SPEF2Q9C093 1822 aa12.42□□□□□ -0.42
KARS-209ENST00000568378 KLRK1P26718 216 aa12.42□□□□□ -0.42
KARS-209ENST00000568378 KCNJ4P48050 445 aa12.42□□□□□ -0.42
KARS-209ENST00000568378 GOLGA2Q08379 1002 aa12.42□□□□□ -0.42
KARS-209ENST00000568378 SNAPC2Q13487 334 aa12.42□□□□□ -0.42
KARS-209ENST00000568378 KRT24Q2M2I5 525 aa12.42□□□□□ -0.42
KARS-209ENST00000568378 C17orf99Q6UX52 265 aa12.42□□□□□ -0.42
KARS-209ENST00000568378 PNNQ9H307 717 aaKnown RBP12.42□□□□□ -0.42
KARS-209ENST00000568378 HYPKQ9NX55 129 aa12.42□□□□□ -0.42
KARS-209ENST00000568378 IRS2Q9Y4H2 1338 aa12.41□□□□□ -0.42
KARS-209ENST00000568378 SPDYE5A6NIY4 337 aa12.41□□□□□ -0.42
KARS-209ENST00000568378 CAPN2P17655 700 aa12.41□□□□□ -0.42
KARS-209ENST00000568378 CTSWP56202 376 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms