RNA–Protein interactions for RNA: ENST00000568292.1

CDH3-207, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-207ENST00000568292 NBPF9Q3BBW0 867 aa12.81□□□□□ -0.36
CDH3-207ENST00000568292 PAXIP1Q6ZW49 1069 aaPredicted RBP12.81□□□□□ -0.36
CDH3-207ENST00000568292 SAPCD2Q86UD0 394 aa12.81□□□□□ -0.36
CDH3-207ENST00000568292 VGLL2Q8N8G2 317 aa12.81□□□□□ -0.36
CDH3-207ENST00000568292 HHIPL1Q96JK4 782 aa12.81□□□□□ -0.36
CDH3-207ENST00000568292 TNNQ9UQP3 1299 aa12.81□□□□□ -0.36
CDH3-207ENST00000568292 ASTN2O75129 1339 aaPredicted RBP12.81□□□□□ -0.36
CDH3-207ENST00000568292 WDR33Q9C0J8 1336 aaKnown RBP12.81□□□□□ -0.36
CDH3-207ENST00000568292 SLC5A1P13866 664 aa12.8□□□□□ -0.36
CDH3-207ENST00000568292 FGFR2P21802 821 aa12.8□□□□□ -0.36
CDH3-207ENST00000568292 IL15P40933 162 aaPredicted RBP12.8□□□□□ -0.36
CDH3-207ENST00000568292 PUM3Q15397 648 aaKnown RBP12.8□□□□□ -0.36
CDH3-207ENST00000568292 DLK2Q6UY11 383 aa12.8□□□□□ -0.36
CDH3-207ENST00000568292 ATG9AQ7Z3C6 839 aa12.8□□□□□ -0.36
CDH3-207ENST00000568292 DZIP1LQ8IYY4 767 aaKnown RBP12.8□□□□□ -0.36
CDH3-207ENST00000568292 CERS5Q8N5B7 392 aa12.8□□□□□ -0.36
CDH3-207ENST00000568292 TMEM57Q8N5G2 664 aa12.8□□□□□ -0.36
CDH3-207ENST00000568292 MTMR14Q8NCE2 650 aa12.8□□□□□ -0.36
CDH3-207ENST00000568292 LPIN2Q92539 896 aa12.8□□□□□ -0.36
CDH3-207ENST00000568292 SIL1Q9H173 461 aa12.8□□□□□ -0.36
CDH3-207ENST00000568292 GBA2Q9HCG7 927 aaPredicted RBP12.8□□□□□ -0.36
CDH3-207ENST00000568292 COPRSQ9NQ92 184 aa12.8□□□□□ -0.36
CDH3-207ENST00000568292 F8W031 263 aaPredicted RBP12.79□□□□□ -0.36
CDH3-207ENST00000568292 SRGAP3O43295 1099 aa12.79□□□□□ -0.36
CDH3-207ENST00000568292 HSPA1AP0DMV8 641 aaKnown RBP12.79□□□□□ -0.36
CDH3-207ENST00000568292 HSPA1BP0DMV9 641 aaKnown RBP12.79□□□□□ -0.36
CDH3-207ENST00000568292 BCAMP50895 628 aa12.79□□□□□ -0.36
CDH3-207ENST00000568292 CYP4F22Q6NT55 531 aa12.79□□□□□ -0.36
CDH3-207ENST00000568292 FTSJ3Q8IY81 847 aaKnown RBP12.79□□□□□ -0.36
CDH3-207ENST00000568292 CAPNS2Q96L46 248 aa12.79□□□□□ -0.36
CDH3-207ENST00000568292 JAG2Q9Y219 1238 aa12.79□□□□□ -0.36
CDH3-207ENST00000568292 MYO1BO43795 1136 aa12.78□□□□□ -0.36
CDH3-207ENST00000568292 MS4A1P11836 297 aa12.78□□□□□ -0.36
CDH3-207ENST00000568292 RBM5P52756 815 aaKnown RBP eCLIP12.78□□□□□ -0.36
CDH3-207ENST00000568292 MAP2K1Q02750 393 aaPredicted RBP12.78□□□□□ -0.36
CDH3-207ENST00000568292 GRM1Q13255 1194 aa12.78□□□□□ -0.36
CDH3-207ENST00000568292 MTX1Q13505 466 aa12.78□□□□□ -0.36
CDH3-207ENST00000568292 CFAP100Q494V2 611 aa12.78□□□□□ -0.36
CDH3-207ENST00000568292 MFSD14BQ5SR56 506 aa12.78□□□□□ -0.36
CDH3-207ENST00000568292 TBC1D22AQ8WUA7 517 aa12.78□□□□□ -0.36
CDH3-207ENST00000568292 CDCA5Q96FF9 252 aa12.78□□□□□ -0.36
CDH3-207ENST00000568292 ZBED3Q96IU2 234 aaPredicted RBP12.78□□□□□ -0.36
CDH3-207ENST00000568292 PA2G4Q9UQ80 394 aaKnown RBP12.78□□□□□ -0.36
CDH3-207ENST00000568292 PSME4Q14997 1843 aa12.77□□□□□ -0.37
CDH3-207ENST00000568292 MAP2K2P36507 400 aa12.77□□□□□ -0.37
CDH3-207ENST00000568292 HUNKP57058 714 aa12.77□□□□□ -0.37
CDH3-207ENST00000568292 CHAF1AQ13111 956 aaPredicted RBP12.77□□□□□ -0.37
CDH3-207ENST00000568292 ATP2B3Q16720 1220 aa12.77□□□□□ -0.37
CDH3-207ENST00000568292 APOBEC3FQ8IUX4 373 aaKnown RBP12.77□□□□□ -0.37
CDH3-207ENST00000568292 AIDAQ96BJ3 306 aa12.77□□□□□ -0.37
CDH3-207ENST00000568292 GNL3LQ9NVN8 582 aaKnown RBP12.77□□□□□ -0.37
CDH3-207ENST00000568292 IQSEC3Q9UPP2 1182 aaPredicted RBP12.77□□□□□ -0.37
CDH3-207ENST00000568292 AKAP2Q9Y2D5 859 aa12.77□□□□□ -0.37
CDH3-207ENST00000568292 ZBTB7BO15156 539 aaPredicted RBP12.76□□□□□ -0.37
CDH3-207ENST00000568292 NF2P35240 595 aa12.76□□□□□ -0.37
CDH3-207ENST00000568292 FKBP1BP68106 108 aa12.76□□□□□ -0.37
CDH3-207ENST00000568292 ATP8B2P98198 1209 aa12.76□□□□□ -0.37
CDH3-207ENST00000568292 G3BP1Q13283 466 aaKnown RBP eCLIP12.76□□□□□ -0.37
CDH3-207ENST00000568292 RGMBQ6NW40 437 aa12.76□□□□□ -0.37
CDH3-207ENST00000568292 ITPRIPQ8IWB1 547 aa12.76□□□□□ -0.37
CDH3-207ENST00000568292 CCDC102AQ96A19 550 aa12.76□□□□□ -0.37
CDH3-207ENST00000568292 PRMT6Q96LA8 375 aaPredicted RBP12.76□□□□□ -0.37
CDH3-207ENST00000568292 MRIQ9BWK5 157 aa12.76□□□□□ -0.37
CDH3-207ENST00000568292 WBP1LQ9NX94 342 aa12.76□□□□□ -0.37
CDH3-207ENST00000568292 TTF2Q9UNY4 1162 aaKnown RBP12.76□□□□□ -0.37
CDH3-207ENST00000568292 PRAMEF18Q5VWM3 479 aa12.75□□□□□ -0.37
CDH3-207ENST00000568292 WDR66Q8TBY9 1149 aa12.75□□□□□ -0.37
CDH3-207ENST00000568292 TRPM7Q96QT4 1865 aa12.75□□□□□ -0.37
CDH3-207ENST00000568292 BEGAINQ9BUH8 593 aa12.75□□□□□ -0.37
CDH3-207ENST00000568292 SERPINA10Q9UK55 444 aa12.75□□□□□ -0.37
CDH3-207ENST00000568292 SCAF8Q9UPN6 1271 aaKnown RBP12.75□□□□□ -0.37
CDH3-207ENST00000568292 SUGT1Q9Y2Z0 365 aa12.75□□□□□ -0.37
CDH3-207ENST00000568292 SPDYE2BA6NHP3 402 aa12.74□□□□□ -0.37
CDH3-207ENST00000568292 AOC2O75106 756 aa12.74□□□□□ -0.37
CDH3-207ENST00000568292 SPDYE6P0CI01 402 aa12.74□□□□□ -0.37
CDH3-207ENST00000568292 ZNF157P51786 506 aaPredicted RBP12.74□□□□□ -0.37
CDH3-207ENST00000568292 TIMM10P62072 90 aa12.74□□□□□ -0.37
CDH3-207ENST00000568292 HDLBPQ00341 1268 aaKnown RBP12.74□□□□□ -0.37
CDH3-207ENST00000568292 TFCP2Q12800 502 aa12.74□□□□□ -0.37
CDH3-207ENST00000568292 PPP2R3BQ9Y5P8 575 aa12.74□□□□□ -0.37
CDH3-207ENST00000568292 GTF3C3Q9Y5Q9 886 aa12.74□□□□□ -0.37
CDH3-207ENST00000568292 PNMA6EA0A0J9YXQ4 647 aa12.73□□□□□ -0.37
CDH3-207ENST00000568292 FOXN1O15353 648 aa12.73□□□□□ -0.37
CDH3-207ENST00000568292 RLBP1P12271 317 aa12.73□□□□□ -0.37
CDH3-207ENST00000568292 CRKP46108 304 aa12.73□□□□□ -0.37
CDH3-207ENST00000568292 CTCFP49711 727 aaPredicted RBP12.73□□□□□ -0.37
CDH3-207ENST00000568292 NOGQ13253 232 aa12.73□□□□□ -0.37
CDH3-207ENST00000568292 TTLL12Q14166 644 aaPredicted RBP12.73□□□□□ -0.37
CDH3-207ENST00000568292 ARMC9Q7Z3E5 817 aa12.73□□□□□ -0.37
CDH3-207ENST00000568292 DEFB129Q9H1M3 183 aa12.73□□□□□ -0.37
CDH3-207ENST00000568292 RCAN3Q9UKA8 241 aa12.73□□□□□ -0.37
CDH3-207ENST00000568292 DENND2AQ9ULE3 1009 aa12.73□□□□□ -0.37
CDH3-207ENST00000568292 PCDHAC2Q9Y5I4 1007 aa12.73□□□□□ -0.37
CDH3-207ENST00000568292 POLR2AP24928 1970 aaKnown RBP12.72□□□□□ -0.37
CDH3-207ENST00000568292 A0A1B0GUL6 1792 aa12.72□□□□□ -0.37
CDH3-207ENST00000568292 MAST3O60307 1309 aa12.72□□□□□ -0.37
CDH3-207ENST00000568292 CLRN2A0PK11 232 aa12.72□□□□□ -0.37
CDH3-207ENST00000568292 UBE2Q2LH0YL09 131 aa12.72□□□□□ -0.37
CDH3-207ENST00000568292 SEMA3EO15041 775 aa12.72□□□□□ -0.37
CDH3-207ENST00000568292 ZBTB22O15209 634 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms