RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 FKBP1BP68106 108 aa16.18■□□□□ 0.18
TSC2-220ENST00000568238 CERS5Q8N5B7 392 aa16.18■□□□□ 0.18
TSC2-220ENST00000568238 ANKRD44Q8N8A2 993 aa16.18■□□□□ 0.18
TSC2-220ENST00000568238 MROH5Q6ZUA9 1318 aa16.18■□□□□ 0.18
TSC2-220ENST00000568238 COL1A1P02452 1464 aaPredicted RBP16.17■□□□□ 0.18
TSC2-220ENST00000568238 CASP8AP2Q9UKL3 1982 aa16.17■□□□□ 0.18
TSC2-220ENST00000568238 UBE4AQ14139 1066 aa16.17■□□□□ 0.18
TSC2-220ENST00000568238 APOBEC3FQ8IUX4 373 aaKnown RBP16.17■□□□□ 0.18
TSC2-220ENST00000568238 ZIC5Q96T25 663 aa16.17■□□□□ 0.18
TSC2-220ENST00000568238 PUS3Q9BZE2 481 aaKnown RBP16.17■□□□□ 0.18
TSC2-220ENST00000568238 TSKSQ9UJT2 592 aa16.17■□□□□ 0.18
TSC2-220ENST00000568238 MYH13Q9UKX3 1938 aa16.17■□□□□ 0.18
TSC2-220ENST00000568238 SLC10A3P09131 477 aa16.16■□□□□ 0.18
TSC2-220ENST00000568238 FKBP1AP62942 108 aaKnown RBP16.16■□□□□ 0.18
TSC2-220ENST00000568238 ZBED3Q96IU2 234 aaPredicted RBP16.16■□□□□ 0.18
TSC2-220ENST00000568238 USP44Q9H0E7 712 aa16.16■□□□□ 0.18
TSC2-220ENST00000568238 JAG2Q9Y219 1238 aa16.16■□□□□ 0.18
TSC2-220ENST00000568238 RIPOR2Q9Y4F9 1068 aa16.16■□□□□ 0.18
TSC2-220ENST00000568238 F8W031 263 aaPredicted RBP16.15■□□□□ 0.18
TSC2-220ENST00000568238 NF2P35240 595 aa16.15■□□□□ 0.18
TSC2-220ENST00000568238 RARSP54136 660 aaKnown RBP16.15■□□□□ 0.18
TSC2-220ENST00000568238 DLGAP5Q15398 846 aa16.15■□□□□ 0.18
TSC2-220ENST00000568238 METTL24Q5JXM2 366 aa16.15■□□□□ 0.18
TSC2-220ENST00000568238 PRAMEF18Q5VWM3 479 aa16.15■□□□□ 0.18
TSC2-220ENST00000568238 HIBADHP31937 336 aaKnown RBP16.14■□□□□ 0.17
TSC2-220ENST00000568238 GYG1P46976 350 aa16.14■□□□□ 0.17
TSC2-220ENST00000568238 TTLL12Q14166 644 aaPredicted RBP16.14■□□□□ 0.17
TSC2-220ENST00000568238 RASAL3Q86YV0 1011 aa16.14■□□□□ 0.17
TSC2-220ENST00000568238 MTMR14Q8NCE2 650 aa16.14■□□□□ 0.17
TSC2-220ENST00000568238 FAM205AQ6ZU69 1335 aa16.14■□□□□ 0.17
TSC2-220ENST00000568238 KIF23Q02241 960 aaPredicted RBP16.13■□□□□ 0.17
TSC2-220ENST00000568238 CFAP100Q494V2 611 aa16.13■□□□□ 0.17
TSC2-220ENST00000568238 LRRC24Q50LG9 513 aa16.13■□□□□ 0.17
TSC2-220ENST00000568238 MFSD14BQ5SR56 506 aa16.13■□□□□ 0.17
TSC2-220ENST00000568238 VPS37DQ86XT2 251 aa16.13■□□□□ 0.17
TSC2-220ENST00000568238 SPDYE2BA6NHP3 402 aa16.12■□□□□ 0.17
TSC2-220ENST00000568238 MYO1BO43795 1136 aa16.12■□□□□ 0.17
TSC2-220ENST00000568238 BCAR3O75815 825 aa16.12■□□□□ 0.17
TSC2-220ENST00000568238 SPDYE6P0CI01 402 aa16.12■□□□□ 0.17
TSC2-220ENST00000568238 MOB2Q70IA6 237 aa16.12■□□□□ 0.17
TSC2-220ENST00000568238 VGLL2Q8N8G2 317 aa16.12■□□□□ 0.17
TSC2-220ENST00000568238 TDRD7Q8NHU6 1098 aaKnown RBP16.12■□□□□ 0.17
TSC2-220ENST00000568238 KLHDC4Q8TBB5 520 aa16.12■□□□□ 0.17
TSC2-220ENST00000568238 FAM84BQ96KN1 310 aaPredicted RBP16.12■□□□□ 0.17
TSC2-220ENST00000568238 API5Q9BZZ5 524 aaKnown RBP16.12■□□□□ 0.17
TSC2-220ENST00000568238 SAGE1Q9NXZ1 904 aa16.12■□□□□ 0.17
TSC2-220ENST00000568238 NOB1Q9ULX3 412 aaKnown RBP16.12■□□□□ 0.17
TSC2-220ENST00000568238 UBE2Q2LH0YL09 131 aa16.11■□□□□ 0.17
TSC2-220ENST00000568238 PDE8BO95263 885 aa16.11■□□□□ 0.17
TSC2-220ENST00000568238 PCDHAC2Q9Y5I4 1007 aa16.11■□□□□ 0.17
TSC2-220ENST00000568238 KIF16BQ96L93 1317 aa16.11■□□□□ 0.17
TSC2-220ENST00000568238 CLRN2A0PK11 232 aa16.1■□□□□ 0.17
TSC2-220ENST00000568238 UBTFL1P0CB47 393 aaPredicted RBP16.1■□□□□ 0.17
TSC2-220ENST00000568238 RBM5P52756 815 aaKnown RBP eCLIP16.1■□□□□ 0.17
TSC2-220ENST00000568238 CAVIN4Q5BKX8 364 aa16.1■□□□□ 0.17
TSC2-220ENST00000568238 REM2Q8IYK8 340 aaPredicted RBP16.1■□□□□ 0.17
TSC2-220ENST00000568238 DEFB129Q9H1M3 183 aa16.1■□□□□ 0.17
TSC2-220ENST00000568238 PPP2R3BQ9Y5P8 575 aa16.1■□□□□ 0.17
TSC2-220ENST00000568238 SSC5DA1L4H1 1573 aa16.09■□□□□ 0.17
TSC2-220ENST00000568238 PUM3Q15397 648 aaKnown RBP16.09■□□□□ 0.17
TSC2-220ENST00000568238 ARMC9Q7Z3E5 817 aa16.09■□□□□ 0.17
TSC2-220ENST00000568238 FBXO33Q7Z6M2 555 aa16.09■□□□□ 0.17
TSC2-220ENST00000568238 ABHD8Q96I13 439 aa16.09■□□□□ 0.17
TSC2-220ENST00000568238 VEZTQ9HBM0 779 aa16.09■□□□□ 0.17
TSC2-220ENST00000568238 TTF2Q9UNY4 1162 aaKnown RBP16.09■□□□□ 0.17
TSC2-220ENST00000568238 LAMB1P07942 1786 aa16.08■□□□□ 0.17
TSC2-220ENST00000568238 OTOFQ9HC10 1997 aa16.08■□□□□ 0.16
TSC2-220ENST00000568238 EYA2O00167 538 aa16.08■□□□□ 0.16
TSC2-220ENST00000568238 FRAT2O75474 233 aaPredicted RBP16.08■□□□□ 0.16
TSC2-220ENST00000568238 RFX5P48382 616 aaPredicted RBP16.08■□□□□ 0.16
TSC2-220ENST00000568238 CHAF1AQ13111 956 aaPredicted RBP16.08■□□□□ 0.16
TSC2-220ENST00000568238 PRKG1Q13976 671 aa16.08■□□□□ 0.16
TSC2-220ENST00000568238 FRAT1Q92837 279 aaPredicted RBP16.08■□□□□ 0.16
TSC2-220ENST00000568238 PRMT6Q96LA8 375 aaPredicted RBP16.08■□□□□ 0.16
TSC2-220ENST00000568238 CSRNP1Q96S65 589 aa16.08■□□□□ 0.16
TSC2-220ENST00000568238 RNF186Q9NXI6 227 aa16.08■□□□□ 0.16
TSC2-220ENST00000568238 SERPINA10Q9UK55 444 aa16.08■□□□□ 0.16
TSC2-220ENST00000568238 IQSEC3Q9UPP2 1182 aaPredicted RBP16.08■□□□□ 0.16
TSC2-220ENST00000568238 AOX1Q06278 1338 aa16.08■□□□□ 0.16
TSC2-220ENST00000568238 TRPA1O75762 1119 aa16.07■□□□□ 0.16
TSC2-220ENST00000568238 IFIT1P09914 478 aaKnown RBP16.07■□□□□ 0.16
TSC2-220ENST00000568238 PTPN12Q05209 780 aaKnown RBP16.07■□□□□ 0.16
TSC2-220ENST00000568238 TBC1D22AQ8WUA7 517 aa16.07■□□□□ 0.16
TSC2-220ENST00000568238 RCAN3Q9UKA8 241 aa16.07■□□□□ 0.16
TSC2-220ENST00000568238 ANGEL1Q9UNK9 670 aaKnown RBP16.07■□□□□ 0.16
TSC2-220ENST00000568238 HDAC5Q9UQL6 1122 aa16.07■□□□□ 0.16
TSC2-220ENST00000568238 SLC5A1P13866 664 aa16.06■□□□□ 0.16
TSC2-220ENST00000568238 LRRFIP2Q9Y608 721 aaKnown RBP16.06■□□□□ 0.16
TSC2-220ENST00000568238 PPP1R12BO60237 982 aaPredicted RBP16.05■□□□□ 0.16
TSC2-220ENST00000568238 FGFR2P21802 821 aa16.05■□□□□ 0.16
TSC2-220ENST00000568238 CRKP46108 304 aa16.05■□□□□ 0.16
TSC2-220ENST00000568238 BCAMP50895 628 aa16.05■□□□□ 0.16
TSC2-220ENST00000568238 TNFAIP1Q13829 316 aa16.05■□□□□ 0.16
TSC2-220ENST00000568238 SUPT20HL1Q3ZLR7 823 aa16.05■□□□□ 0.16
TSC2-220ENST00000568238 SPDYE2Q495Y8 402 aa16.05■□□□□ 0.16
TSC2-220ENST00000568238 LDLRAD1Q5T700 205 aa16.05■□□□□ 0.16
TSC2-220ENST00000568238 ARHGAP45Q92619 1136 aa16.05■□□□□ 0.16
TSC2-220ENST00000568238 MEIS3Q99687 375 aa16.05■□□□□ 0.16
TSC2-220ENST00000568238 SIL1Q9H173 461 aa16.05■□□□□ 0.16
TSC2-220ENST00000568238 FBXO3Q9UK99 471 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms