RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 USP31Q70CQ4 1352 aa8.22□□□□□ -1.09
SHCBP1-206ENST00000567698 ESRRAP11474 423 aaPredicted RBP8.22□□□□□ -1.09
SHCBP1-206ENST00000567698 GSTT1P30711 240 aa8.22□□□□□ -1.09
SHCBP1-206ENST00000567698 CACTIN-AS1Q8N1I8 211 aa8.22□□□□□ -1.09
SHCBP1-206ENST00000567698 IL22RA1Q8N6P7 574 aa8.22□□□□□ -1.09
SHCBP1-206ENST00000567698 ENAMQ9NRM1 1142 aa8.22□□□□□ -1.09
SHCBP1-206ENST00000567698 VTI1BQ9UEU0 232 aa8.22□□□□□ -1.09
SHCBP1-206ENST00000567698 DEAF1O75398 565 aaPredicted RBP8.21□□□□□ -1.1
SHCBP1-206ENST00000567698 XRCC5P13010 732 aaKnown RBP8.21□□□□□ -1.1
SHCBP1-206ENST00000567698 INSM1Q01101 510 aaPredicted RBP8.21□□□□□ -1.1
SHCBP1-206ENST00000567698 SETDB1Q15047 1291 aa8.21□□□□□ -1.1
SHCBP1-206ENST00000567698 RPS26P11Q5JNZ5 115 aaPredicted RBP8.21□□□□□ -1.1
SHCBP1-206ENST00000567698 CLEC4MQ9H2X3 399 aaPredicted RBP8.21□□□□□ -1.1
SHCBP1-206ENST00000567698 H3BRJ5 948 aa8.2□□□□□ -1.1
SHCBP1-206ENST00000567698 SOX1O00570 391 aaPredicted RBP8.2□□□□□ -1.1
SHCBP1-206ENST00000567698 PCDH1Q08174 1060 aa8.2□□□□□ -1.1
SHCBP1-206ENST00000567698 WFDC8Q8IUA0 241 aa8.2□□□□□ -1.1
SHCBP1-206ENST00000567698 DMRTC2Q8IXT2 367 aaPredicted RBP8.2□□□□□ -1.1
SHCBP1-206ENST00000567698 NRSN2Q9GZP1 204 aa8.2□□□□□ -1.1
SHCBP1-206ENST00000567698 MRS2Q9HD23 443 aa8.2□□□□□ -1.1
SHCBP1-206ENST00000567698 SEC31BQ9NQW1 1179 aa8.2□□□□□ -1.1
SHCBP1-206ENST00000567698 PPM1HQ9ULR3 514 aa8.2□□□□□ -1.1
SHCBP1-206ENST00000567698 PPME1Q9Y570 386 aa8.2□□□□□ -1.1
SHCBP1-206ENST00000567698 CNTNAP5Q8WYK1 1306 aa8.2□□□□□ -1.1
SHCBP1-206ENST00000567698 LINC01387J3KSC0 135 aa8.19□□□□□ -1.1
SHCBP1-206ENST00000567698 B3GALT4O96024 378 aa8.19□□□□□ -1.1
SHCBP1-206ENST00000567698 TXNDC11Q6PKC3 985 aa8.19□□□□□ -1.1
SHCBP1-206ENST00000567698 DTHD1Q6ZMT9 781 aa8.19□□□□□ -1.1
SHCBP1-206ENST00000567698 GALNT11Q8NCW6 608 aa8.19□□□□□ -1.1
SHCBP1-206ENST00000567698 RRAGCQ9HB90 399 aa8.19□□□□□ -1.1
SHCBP1-206ENST00000567698 ST13P50502 369 aaKnown RBP8.18□□□□□ -1.1
SHCBP1-206ENST00000567698 TSNAXIP1Q2TAA8 658 aa8.18□□□□□ -1.1
SHCBP1-206ENST00000567698 NECAB3Q96P71 396 aaPredicted RBP8.18□□□□□ -1.1
SHCBP1-206ENST00000567698 AKAP2Q9Y2D5 859 aa8.18□□□□□ -1.1
SHCBP1-206ENST00000567698 A0A0A0MRY4 1105 aa8.17□□□□□ -1.1
SHCBP1-206ENST00000567698 ENC1O14682 589 aa8.17□□□□□ -1.1
SHCBP1-206ENST00000567698 GNB5O14775 395 aa8.17□□□□□ -1.1
SHCBP1-206ENST00000567698 FBXO24O75426 580 aa8.17□□□□□ -1.1
SHCBP1-206ENST00000567698 CDC25BP30305 580 aa8.17□□□□□ -1.1
SHCBP1-206ENST00000567698 FANCCQ00597 558 aa8.17□□□□□ -1.1
SHCBP1-206ENST00000567698 TRIM56Q9BRZ2 755 aaKnown RBP8.17□□□□□ -1.1
SHCBP1-206ENST00000567698 PLVAPQ9BX97 442 aa8.17□□□□□ -1.1
SHCBP1-206ENST00000567698 PPP4R2Q9NY27 417 aa8.17□□□□□ -1.1
SHCBP1-206ENST00000567698 FSCN2O14926 492 aa8.16□□□□□ -1.1
SHCBP1-206ENST00000567698 PAGE1O75459 146 aa8.16□□□□□ -1.1
SHCBP1-206ENST00000567698 CELA3AP09093 270 aa8.16□□□□□ -1.1
SHCBP1-206ENST00000567698 COL8A1P27658 744 aa8.16□□□□□ -1.1
SHCBP1-206ENST00000567698 IKBKEQ14164 716 aa8.16□□□□□ -1.1
SHCBP1-206ENST00000567698 TAF1CQ15572 869 aaPredicted RBP8.16□□□□□ -1.1
SHCBP1-206ENST00000567698 TPTE2Q6XPS3 522 aa8.16□□□□□ -1.1
SHCBP1-206ENST00000567698 NPM2Q86SE8 214 aaKnown RBP8.16□□□□□ -1.1
SHCBP1-206ENST00000567698 METTL16Q86W50 562 aaKnown RBP8.16□□□□□ -1.1
SHCBP1-206ENST00000567698 FMR1NBQ8N0W7 255 aaPredicted RBP8.16□□□□□ -1.1
SHCBP1-206ENST00000567698 STK35Q8TDR2 534 aa8.16□□□□□ -1.1
SHCBP1-206ENST00000567698 WNT8BQ93098 351 aa8.16□□□□□ -1.1
SHCBP1-206ENST00000567698 SOX17Q9H6I2 414 aaPredicted RBP8.16□□□□□ -1.1
SHCBP1-206ENST00000567698 MKL2Q9ULH7 1088 aa8.16□□□□□ -1.1
SHCBP1-206ENST00000567698 E9PSI1 815 aa8.15□□□□□ -1.1
SHCBP1-206ENST00000567698 DLL1O00548 723 aa8.15□□□□□ -1.1
SHCBP1-206ENST00000567698 ADAM11O75078 769 aa8.15□□□□□ -1.1
SHCBP1-206ENST00000567698 PIP4K2BP78356 416 aa8.15□□□□□ -1.1
SHCBP1-206ENST00000567698 FOXD4L6Q3SYB3 417 aaPredicted RBP8.15□□□□□ -1.1
SHCBP1-206ENST00000567698 RASIP1Q5U651 963 aa8.15□□□□□ -1.1
SHCBP1-206ENST00000567698 FOXD4L3Q6VB84 417 aaPredicted RBP8.15□□□□□ -1.1
SHCBP1-206ENST00000567698 DTWD1Q8N5C7 304 aa8.15□□□□□ -1.1
SHCBP1-206ENST00000567698 TMEM87AQ8NBN3 555 aa8.15□□□□□ -1.1
SHCBP1-206ENST00000567698 KLHDC7BQ96G42 594 aa8.15□□□□□ -1.1
SHCBP1-206ENST00000567698 CARD10Q9BWT7 1032 aa8.15□□□□□ -1.1
SHCBP1-206ENST00000567698 ZFYVE1Q9HBF4 777 aa8.15□□□□□ -1.1
SHCBP1-206ENST00000567698 KCNK4Q9NYG8 393 aa8.15□□□□□ -1.1
SHCBP1-206ENST00000567698 ZNF157P51786 506 aaPredicted RBP8.14□□□□□ -1.11
SHCBP1-206ENST00000567698 HDLBPQ00341 1268 aaKnown RBP8.14□□□□□ -1.11
SHCBP1-206ENST00000567698 FBXO11Q86XK2 927 aa8.14□□□□□ -1.11
SHCBP1-206ENST00000567698 OSGEPQ9NPF4 335 aa8.14□□□□□ -1.11
SHCBP1-206ENST00000567698 TTF2Q9UNY4 1162 aaKnown RBP8.14□□□□□ -1.11
SHCBP1-206ENST00000567698 FAM229AH3BQW9 127 aa8.13□□□□□ -1.11
SHCBP1-206ENST00000567698 CABP4P57796 275 aa8.13□□□□□ -1.11
SHCBP1-206ENST00000567698 TRAPPC3LQ5T215 181 aa8.13□□□□□ -1.11
SHCBP1-206ENST00000567698 SV2BQ7L1I2 683 aa8.13□□□□□ -1.11
SHCBP1-206ENST00000567698 ERMP1Q7Z2K6 904 aa8.13□□□□□ -1.11
SHCBP1-206ENST00000567698 SRA1Q9HD15 236 aaKnown RBP8.13□□□□□ -1.11
SHCBP1-206ENST00000567698 TMEM39AQ9NV64 488 aa8.13□□□□□ -1.11
SHCBP1-206ENST00000567698 SCAMP3O14828 347 aaKnown RBP8.12□□□□□ -1.11
SHCBP1-206ENST00000567698 CTSBP07858 339 aa8.12□□□□□ -1.11
SHCBP1-206ENST00000567698 BMP6P22004 513 aa8.12□□□□□ -1.11
SHCBP1-206ENST00000567698 ITGAEP38570 1179 aa8.12□□□□□ -1.11
SHCBP1-206ENST00000567698 C19orf57Q0VDD7 668 aa8.12□□□□□ -1.11
SHCBP1-206ENST00000567698 PDZD3Q86UT5 571 aa8.12□□□□□ -1.11
SHCBP1-206ENST00000567698 MAP4K3Q8IVH8 894 aa8.12□□□□□ -1.11
SHCBP1-206ENST00000567698 BEND7Q8N7W2 519 aaPredicted RBP8.12□□□□□ -1.11
SHCBP1-206ENST00000567698 NOC4LQ9BVI4 516 aaKnown RBP8.12□□□□□ -1.11
SHCBP1-206ENST00000567698 METTL5Q9NRN9 209 aaKnown RBP8.12□□□□□ -1.11
SHCBP1-206ENST00000567698 DDX3YO15523 660 aaKnown RBP8.11□□□□□ -1.11
SHCBP1-206ENST00000567698 ECEL1O95672 775 aa8.11□□□□□ -1.11
SHCBP1-206ENST00000567698 GSK3AP49840 483 aa8.11□□□□□ -1.11
SHCBP1-206ENST00000567698 KLHL23Q8NBE8 558 aa8.11□□□□□ -1.11
SHCBP1-206ENST00000567698 SLC7A3Q8WY07 619 aa8.11□□□□□ -1.11
SHCBP1-206ENST00000567698 CEP44Q9C0F1 390 aa8.11□□□□□ -1.11
SHCBP1-206ENST00000567698 GPN3Q9UHW5 284 aaPredicted RBP8.11□□□□□ -1.11
SHCBP1-206ENST00000567698 WISP1O95388 367 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms