RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 AKAP11Q9UKA4 1901 aa19.35■□□□□ 0.69
CDR2-206ENST00000567406 ALDH1L1O75891 902 aa19.34■□□□□ 0.69
CDR2-206ENST00000567406 NBPF7P0C2Y1 421 aaPredicted RBP19.34■□□□□ 0.69
CDR2-206ENST00000567406 C15orf52Q6ZUT6 534 aaKnown RBP19.34■□□□□ 0.69
CDR2-206ENST00000567406 SAGE1Q9NXZ1 904 aa19.34■□□□□ 0.69
CDR2-206ENST00000567406 AOX1Q06278 1338 aa19.33■□□□□ 0.69
CDR2-206ENST00000567406 IL1R1P14778 569 aa19.33■□□□□ 0.68
CDR2-206ENST00000567406 DLGAP5Q15398 846 aa19.33■□□□□ 0.68
CDR2-206ENST00000567406 ZNF804AQ7Z570 1209 aa19.33■□□□□ 0.68
CDR2-206ENST00000567406 MRPL50Q8N5N7 158 aaKnown RBP19.33■□□□□ 0.68
CDR2-206ENST00000567406 CLRN2A0PK11 232 aa19.32■□□□□ 0.68
CDR2-206ENST00000567406 PTPN12Q05209 780 aaKnown RBP19.32■□□□□ 0.68
CDR2-206ENST00000567406 TBC1D8O95759 1140 aa19.31■□□□□ 0.68
CDR2-206ENST00000567406 NF2P35240 595 aa19.31■□□□□ 0.68
CDR2-206ENST00000567406 GYG1P46976 350 aa19.31■□□□□ 0.68
CDR2-206ENST00000567406 CFAP100Q494V2 611 aa19.31■□□□□ 0.68
CDR2-206ENST00000567406 APOBEC3FQ8IUX4 373 aaKnown RBP19.31■□□□□ 0.68
CDR2-206ENST00000567406 DEFB129Q9H1M3 183 aa19.31■□□□□ 0.68
CDR2-206ENST00000567406 PRMT6Q96LA8 375 aaPredicted RBP19.3■□□□□ 0.68
CDR2-206ENST00000567406 BICC1Q9H694 974 aaKnown RBP19.3■□□□□ 0.68
CDR2-206ENST00000567406 ANGEL1Q9UNK9 670 aaKnown RBP19.3■□□□□ 0.68
CDR2-206ENST00000567406 MMP14P50281 582 aa19.29■□□□□ 0.68
CDR2-206ENST00000567406 RBM5P52756 815 aaKnown RBP eCLIP19.29■□□□□ 0.68
CDR2-206ENST00000567406 ARMC9Q7Z3E5 817 aa19.29■□□□□ 0.68
CDR2-206ENST00000567406 VEZTQ9HBM0 779 aa19.29■□□□□ 0.68
CDR2-206ENST00000567406 LRRC24Q50LG9 513 aa19.28■□□□□ 0.68
CDR2-206ENST00000567406 KLHDC4Q8TBB5 520 aa19.28■□□□□ 0.68
CDR2-206ENST00000567406 SSH1Q8WYL5 1049 aa19.28■□□□□ 0.68
CDR2-206ENST00000567406 CDCA7LQ96GN5 454 aa19.28■□□□□ 0.68
CDR2-206ENST00000567406 FAM84BQ96KN1 310 aaPredicted RBP19.28■□□□□ 0.68
CDR2-206ENST00000567406 IQSEC3Q9UPP2 1182 aaPredicted RBP19.28■□□□□ 0.68
CDR2-206ENST00000567406 RIPOR2Q9Y4F9 1068 aa19.28■□□□□ 0.68
CDR2-206ENST00000567406 SPDYE2BA6NHP3 402 aa19.27■□□□□ 0.68
CDR2-206ENST00000567406 SPDYE6P0CI01 402 aa19.27■□□□□ 0.68
CDR2-206ENST00000567406 HIBADHP31937 336 aaKnown RBP19.27■□□□□ 0.68
CDR2-206ENST00000567406 ANKRD44Q8N8A2 993 aa19.27■□□□□ 0.68
CDR2-206ENST00000567406 MTMR14Q8NCE2 650 aa19.27■□□□□ 0.68
CDR2-206ENST00000567406 TDRD7Q8NHU6 1098 aaKnown RBP19.27■□□□□ 0.68
CDR2-206ENST00000567406 UTYO14607 1347 aa19.26■□□□□ 0.67
CDR2-206ENST00000567406 UBE4AQ14139 1066 aa19.26■□□□□ 0.67
CDR2-206ENST00000567406 LDLRAD1Q5T700 205 aa19.26■□□□□ 0.67
CDR2-206ENST00000567406 NBPF12Q5TAG4 269 aaPredicted RBP19.26■□□□□ 0.67
CDR2-206ENST00000567406 REM2Q8IYK8 340 aaPredicted RBP19.26■□□□□ 0.67
CDR2-206ENST00000567406 CLMNQ96JQ2 1002 aa19.26■□□□□ 0.67
CDR2-206ENST00000567406 SSC5DA1L4H1 1573 aa19.25■□□□□ 0.67
CDR2-206ENST00000567406 TM4SF4P48230 202 aa19.25■□□□□ 0.67
CDR2-206ENST00000567406 FKBP1AP62942 108 aaKnown RBP19.25■□□□□ 0.67
CDR2-206ENST00000567406 SLFN5Q08AF3 891 aa19.25■□□□□ 0.67
CDR2-206ENST00000567406 GRIK5Q16478 980 aa19.25■□□□□ 0.67
CDR2-206ENST00000567406 MFSD14BQ5SR56 506 aa19.25■□□□□ 0.67
CDR2-206ENST00000567406 R3HDMLQ9H3Y0 253 aa19.25■□□□□ 0.67
CDR2-206ENST00000567406 FAM205AQ6ZU69 1335 aa19.25■□□□□ 0.67
CDR2-206ENST00000567406 E9PSI1 815 aa19.24■□□□□ 0.67
CDR2-206ENST00000567406 RGS19P49795 217 aa19.24■□□□□ 0.67
CDR2-206ENST00000567406 MLLT1Q03111 559 aaPredicted RBP19.24■□□□□ 0.67
CDR2-206ENST00000567406 RABL6Q3YEC7 729 aaPredicted RBP19.24■□□□□ 0.67
CDR2-206ENST00000567406 METTL24Q5JXM2 366 aa19.24■□□□□ 0.67
CDR2-206ENST00000567406 ZNF296Q8WUU4 475 aaPredicted RBP19.24■□□□□ 0.67
CDR2-206ENST00000567406 USP44Q9H0E7 712 aa19.24■□□□□ 0.67
CDR2-206ENST00000567406 TDRD3Q9H7E2 651 aaKnown RBP19.24■□□□□ 0.67
CDR2-206ENST00000567406 TTF2Q9UNY4 1162 aaKnown RBP19.24■□□□□ 0.67
CDR2-206ENST00000567406 MYO1BO43795 1136 aa19.23■□□□□ 0.67
CDR2-206ENST00000567406 CHAF1AQ13111 956 aaPredicted RBP19.23■□□□□ 0.67
CDR2-206ENST00000567406 RASA3Q14644 834 aa19.23■□□□□ 0.67
CDR2-206ENST00000567406 SPRYD7Q5W111 196 aa19.23■□□□□ 0.67
CDR2-206ENST00000567406 CTU1Q7Z7A3 348 aaKnown RBP19.23■□□□□ 0.67
CDR2-206ENST00000567406 SLC10A4Q96EP9 437 aa19.23■□□□□ 0.67
CDR2-206ENST00000567406 PTPRCP08575 1304 aa19.23■□□□□ 0.67
CDR2-206ENST00000567406 MROH5Q6ZUA9 1318 aa19.23■□□□□ 0.67
CDR2-206ENST00000567406 SOX10P56693 466 aa19.22■□□□□ 0.67
CDR2-206ENST00000567406 CDAN1Q8IWY9 1227 aa19.22■□□□□ 0.67
CDR2-206ENST00000567406 ZNF70Q9UC06 446 aaPredicted RBP19.22■□□□□ 0.67
CDR2-206ENST00000567406 ECM29Q5VYK3 1845 aa19.22■□□□□ 0.67
CDR2-206ENST00000567406 BCAMP50895 628 aa19.21■□□□□ 0.67
CDR2-206ENST00000567406 FBXO33Q7Z6M2 555 aa19.21■□□□□ 0.67
CDR2-206ENST00000567406 VPS37DQ86XT2 251 aa19.21■□□□□ 0.67
CDR2-206ENST00000567406 TCP10L2B9ZVM9 353 aa19.2■□□□□ 0.66
CDR2-206ENST00000567406 GPR25O00155 361 aa19.2■□□□□ 0.66
CDR2-206ENST00000567406 PPP1R12BO60237 982 aaPredicted RBP19.2■□□□□ 0.66
CDR2-206ENST00000567406 USP2O75604 605 aaPredicted RBP19.2■□□□□ 0.66
CDR2-206ENST00000567406 SREBF2Q12772 1141 aa19.2■□□□□ 0.66
CDR2-206ENST00000567406 MAP3K11Q16584 847 aa19.2■□□□□ 0.66
CDR2-206ENST00000567406 DZIP1LQ8IYY4 767 aaKnown RBP19.2■□□□□ 0.66
CDR2-206ENST00000567406 VGLL2Q8N8G2 317 aa19.2■□□□□ 0.66
CDR2-206ENST00000567406 PPP2R3BQ9Y5P8 575 aa19.2■□□□□ 0.66
CDR2-206ENST00000567406 COL1A1P02452 1464 aaPredicted RBP19.2■□□□□ 0.66
CDR2-206ENST00000567406 FRAT2O75474 233 aaPredicted RBP19.19■□□□□ 0.66
CDR2-206ENST00000567406 PDE8BO95263 885 aa19.19■□□□□ 0.66
CDR2-206ENST00000567406 CRKP46108 304 aa19.19■□□□□ 0.66
CDR2-206ENST00000567406 SUPT20HL1Q3ZLR7 823 aa19.19■□□□□ 0.66
CDR2-206ENST00000567406 SPDYE2Q495Y8 402 aa19.19■□□□□ 0.66
CDR2-206ENST00000567406 WNK4Q96J92 1243 aa19.19■□□□□ 0.66
CDR2-206ENST00000567406 SMC4Q9NTJ3 1288 aa19.19■□□□□ 0.66
CDR2-206ENST00000567406 SERPINA10Q9UK55 444 aa19.19■□□□□ 0.66
CDR2-206ENST00000567406 GJA5P36382 358 aa19.18■□□□□ 0.66
CDR2-206ENST00000567406 TNRC18O15417 2968 aaPredicted RBP19.18■□□□□ 0.66
CDR2-206ENST00000567406 RFX5P48382 616 aaPredicted RBP19.17■□□□□ 0.66
CDR2-206ENST00000567406 CACNB3P54284 484 aa19.17■□□□□ 0.66
CDR2-206ENST00000567406 CAVIN4Q5BKX8 364 aa19.17■□□□□ 0.66
CDR2-206ENST00000567406 TMEM39BQ9GZU3 492 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms