RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 TNNI3KQ59H18 835 aa18.65■□□□□ 0.58
COMMD4-219ENST00000567399 KIF1BPQ96EK5 621 aa18.65■□□□□ 0.58
COMMD4-219ENST00000567399 GPR108Q9NPR9 543 aa18.65■□□□□ 0.58
COMMD4-219ENST00000567399 HDAC9Q9UKV0 1011 aa18.65■□□□□ 0.58
COMMD4-219ENST00000567399 FPGT-TNNI3KV9GXZ4 949 aa18.65■□□□□ 0.58
COMMD4-219ENST00000567399 CCDC102BQ68D86 513 aa18.64■□□□□ 0.57
COMMD4-219ENST00000567399 USP50Q70EL3 339 aaPredicted RBP18.64■□□□□ 0.57
COMMD4-219ENST00000567399 RHPN1Q8TCX5 695 aa18.64■□□□□ 0.57
COMMD4-219ENST00000567399 PCDHB15Q9Y5E8 787 aa18.64■□□□□ 0.57
COMMD4-219ENST00000567399 F8W031 263 aaPredicted RBP18.63■□□□□ 0.57
COMMD4-219ENST00000567399 PHKA1P46020 1223 aa18.63■□□□□ 0.57
COMMD4-219ENST00000567399 CCDC158Q5M9N0 1113 aa18.63■□□□□ 0.57
COMMD4-219ENST00000567399 MFSD14BQ5SR56 506 aa18.63■□□□□ 0.57
COMMD4-219ENST00000567399 KIAA0825Q8IV33 1275 aa18.63■□□□□ 0.57
COMMD4-219ENST00000567399 CLASRPQ8N2M8 674 aaKnown RBP18.63■□□□□ 0.57
COMMD4-219ENST00000567399 CCDC8Q9H0W5 538 aaPredicted RBP18.63■□□□□ 0.57
COMMD4-219ENST00000567399 IL1RAPL2Q9NP60 686 aa18.63■□□□□ 0.57
COMMD4-219ENST00000567399 ZBTB47Q9UFB7 747 aaPredicted RBP18.63■□□□□ 0.57
COMMD4-219ENST00000567399 DENND2AQ9ULE3 1009 aa18.63■□□□□ 0.57
COMMD4-219ENST00000567399 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.63■□□□□ 0.57
COMMD4-219ENST00000567399 TBC1D10BQ4KMP7 808 aaPredicted RBP18.62■□□□□ 0.57
COMMD4-219ENST00000567399 TTC39AQ5SRH9 613 aa18.62■□□□□ 0.57
COMMD4-219ENST00000567399 SAMD7Q7Z3H4 446 aa18.62■□□□□ 0.57
COMMD4-219ENST00000567399 AACSQ86V21 672 aa18.62■□□□□ 0.57
COMMD4-219ENST00000567399 LDHDQ86WU2 507 aa18.62■□□□□ 0.57
COMMD4-219ENST00000567399 SMC1BQ8NDV3 1235 aa18.62■□□□□ 0.57
COMMD4-219ENST00000567399 RBM46Q8TBY0 533 aaKnown RBP18.62■□□□□ 0.57
COMMD4-219ENST00000567399 TBC1D22AQ8WUA7 517 aa18.62■□□□□ 0.57
COMMD4-219ENST00000567399 FAM205AQ6ZU69 1335 aa18.62■□□□□ 0.57
COMMD4-219ENST00000567399 SCN4AP35499 1836 aa18.62■□□□□ 0.57
COMMD4-219ENST00000567399 ZNF609O15014 1411 aa18.61■□□□□ 0.57
COMMD4-219ENST00000567399 SHTN1A0MZ66 631 aa18.61■□□□□ 0.57
COMMD4-219ENST00000567399 IFIT2P09913 472 aaKnown RBP18.61■□□□□ 0.57
COMMD4-219ENST00000567399 FKBP1AP62942 108 aaKnown RBP18.61■□□□□ 0.57
COMMD4-219ENST00000567399 WDR66Q8TBY9 1149 aa18.61■□□□□ 0.57
COMMD4-219ENST00000567399 LRRCC1Q9C099 1032 aa18.61■□□□□ 0.57
COMMD4-219ENST00000567399 SEMA3EO15041 775 aa18.6■□□□□ 0.57
COMMD4-219ENST00000567399 UQCRFS1P1P0C7P4 283 aa18.6■□□□□ 0.57
COMMD4-219ENST00000567399 RBM5P52756 815 aaKnown RBP eCLIP18.6■□□□□ 0.57
COMMD4-219ENST00000567399 KIF4BQ2VIQ3 1234 aa18.6■□□□□ 0.57
COMMD4-219ENST00000567399 CHADLQ6NUI6 762 aa18.6■□□□□ 0.57
COMMD4-219ENST00000567399 DBNDD2Q9BQY9 259 aa18.6■□□□□ 0.57
COMMD4-219ENST00000567399 SCN9AQ15858 1988 aa18.6■□□□□ 0.57
COMMD4-219ENST00000567399 POTEIP0CG38 1075 aa18.59■□□□□ 0.57
COMMD4-219ENST00000567399 POTEJP0CG39 1038 aa18.59■□□□□ 0.57
COMMD4-219ENST00000567399 MMP14P50281 582 aa18.59■□□□□ 0.57
COMMD4-219ENST00000567399 EAF2Q96CJ1 260 aaPredicted RBP18.59■□□□□ 0.57
COMMD4-219ENST00000567399 GMLQ99445 158 aa18.59■□□□□ 0.57
COMMD4-219ENST00000567399 RWDD1Q9H446 243 aaPredicted RBP18.59■□□□□ 0.57
COMMD4-219ENST00000567399 DCTPP1Q9H773 170 aa18.59■□□□□ 0.57
COMMD4-219ENST00000567399 MYOZ2Q9NPC6 264 aa18.59■□□□□ 0.57
COMMD4-219ENST00000567399 ZNF280AP59817 542 aaPredicted RBP18.58■□□□□ 0.56
COMMD4-219ENST00000567399 FSTL1Q12841 308 aa18.58■□□□□ 0.56
COMMD4-219ENST00000567399 CERS5Q8N5B7 392 aa18.58■□□□□ 0.56
COMMD4-219ENST00000567399 TRPM4Q8TD43 1214 aa18.58■□□□□ 0.56
COMMD4-219ENST00000567399 TTF2Q9UNY4 1162 aaKnown RBP18.58■□□□□ 0.56
COMMD4-219ENST00000567399 C1QTNF8P60827 252 aa18.57■□□□□ 0.56
COMMD4-219ENST00000567399 DLGAP5Q15398 846 aa18.57■□□□□ 0.56
COMMD4-219ENST00000567399 ZGPATQ8N5A5 531 aaKnown RBP18.57■□□□□ 0.56
COMMD4-219ENST00000567399 SMARCA5O60264 1052 aaPredicted RBP18.56■□□□□ 0.56
COMMD4-219ENST00000567399 MAP1SQ66K74 1059 aaPredicted RBP18.56■□□□□ 0.56
COMMD4-219ENST00000567399 SPATA5Q8NB90 893 aa18.56■□□□□ 0.56
COMMD4-219ENST00000567399 DCPSQ96C86 337 aaKnown RBP18.56■□□□□ 0.56
COMMD4-219ENST00000567399 ABCF2Q9UG63 623 aa18.56■□□□□ 0.56
COMMD4-219ENST00000567399 DBNLQ9UJU6 430 aaKnown RBP18.56■□□□□ 0.56
COMMD4-219ENST00000567399 PSME4Q14997 1843 aa18.56■□□□□ 0.56
COMMD4-219ENST00000567399 LDHBP07195 334 aaKnown RBP18.55■□□□□ 0.56
COMMD4-219ENST00000567399 HIRAP54198 1017 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-219ENST00000567399 HDAC1Q13547 482 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-219ENST00000567399 RASGRF1Q13972 1273 aa18.55■□□□□ 0.56
COMMD4-219ENST00000567399 SCARF1Q14162 830 aa18.55■□□□□ 0.56
COMMD4-219ENST00000567399 SPTY2D1Q68D10 685 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-219ENST00000567399 CNTROBQ8N137 903 aa18.55■□□□□ 0.56
COMMD4-219ENST00000567399 ZC3H15Q8WU90 426 aaKnown RBP18.55■□□□□ 0.56
COMMD4-219ENST00000567399 TLR7Q9NYK1 1049 aaKnown RBP18.55■□□□□ 0.56
COMMD4-219ENST00000567399 MAST3O60307 1309 aa18.54■□□□□ 0.56
COMMD4-219ENST00000567399 MYO1BO43795 1136 aa18.54■□□□□ 0.56
COMMD4-219ENST00000567399 EGFRP00533 1210 aa18.54■□□□□ 0.56
COMMD4-219ENST00000567399 NEFLP07196 543 aa18.54■□□□□ 0.56
COMMD4-219ENST00000567399 ARID4AP29374 1257 aaPredicted RBP18.54■□□□□ 0.56
COMMD4-219ENST00000567399 CFAP100Q494V2 611 aa18.54■□□□□ 0.56
COMMD4-219ENST00000567399 GCC1Q96CN9 775 aa18.54■□□□□ 0.56
COMMD4-219ENST00000567399 SNRKQ9NRH2 765 aa18.54■□□□□ 0.56
COMMD4-219ENST00000567399 HMG20BQ9P0W2 317 aa18.54■□□□□ 0.56
COMMD4-219ENST00000567399 SUGT1Q9Y2Z0 365 aa18.54■□□□□ 0.56
COMMD4-219ENST00000567399 ARAP2Q8WZ64 1704 aa18.54■□□□□ 0.56
COMMD4-219ENST00000567399 ANKRD45Q5TZF3 282 aa18.53■□□□□ 0.56
COMMD4-219ENST00000567399 MCAMP43121 646 aa18.52■□□□□ 0.56
COMMD4-219ENST00000567399 NBPF9Q3BBW0 867 aa18.52■□□□□ 0.56
COMMD4-219ENST00000567399 ANGEL2Q5VTE6 544 aaKnown RBP18.52■□□□□ 0.56
COMMD4-219ENST00000567399 ERICH6Q7L0X2 663 aa18.52■□□□□ 0.56
COMMD4-219ENST00000567399 DZIP1Q86YF9 867 aaKnown RBP18.52■□□□□ 0.56
COMMD4-219ENST00000567399 TEKT1Q969V4 418 aa18.52■□□□□ 0.56
COMMD4-219ENST00000567399 GPATCH3Q96I76 525 aa18.52■□□□□ 0.56
COMMD4-219ENST00000567399 LRP2BPQ9P2M1 347 aa18.52■□□□□ 0.56
COMMD4-219ENST00000567399 PDS5AQ29RF7 1337 aaKnown RBP18.51■□□□□ 0.55
COMMD4-219ENST00000567399 SALL1Q9NSC2 1324 aa18.51■□□□□ 0.55
COMMD4-219ENST00000567399 WNT10BO00744 389 aa18.51■□□□□ 0.55
COMMD4-219ENST00000567399 CRKP46108 304 aa18.51■□□□□ 0.55
COMMD4-219ENST00000567399 GRIK5Q16478 980 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms