RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 WNT10BO00744 389 aa23.7■■□□□ 1.38
CPNE7-208ENST00000566398 PUM3Q15397 648 aaKnown RBP23.7■■□□□ 1.38
CPNE7-208ENST00000566398 CAVIN4Q5BKX8 364 aa23.7■■□□□ 1.38
CPNE7-208ENST00000566398 TDRD7Q8NHU6 1098 aaKnown RBP23.7■■□□□ 1.38
CPNE7-208ENST00000566398 CDCA5Q96FF9 252 aa23.7■■□□□ 1.38
CPNE7-208ENST00000566398 HHIPL1Q96JK4 782 aa23.7■■□□□ 1.38
CPNE7-208ENST00000566398 ZKSCAN2Q63HK3 967 aa23.69■■□□□ 1.38
CPNE7-208ENST00000566398 CLUAP1Q96AJ1 413 aa23.69■■□□□ 1.38
CPNE7-208ENST00000566398 GBA2Q9HCG7 927 aaPredicted RBP23.69■■□□□ 1.38
CPNE7-208ENST00000566398 TNNQ9UQP3 1299 aa23.69■■□□□ 1.38
CPNE7-208ENST00000566398 ZNF646O15015 1829 aaPredicted RBP23.68■■□□□ 1.38
CPNE7-208ENST00000566398 FAM205AQ6ZU69 1335 aa23.68■■□□□ 1.38
CPNE7-208ENST00000566398 F8W031 263 aaPredicted RBP23.68■■□□□ 1.38
CPNE7-208ENST00000566398 HUNKP57058 714 aa23.68■■□□□ 1.38
CPNE7-208ENST00000566398 C2orf69Q8N8R5 385 aa23.68■■□□□ 1.38
CPNE7-208ENST00000566398 AIDAQ96BJ3 306 aa23.68■■□□□ 1.38
CPNE7-208ENST00000566398 SIL1Q9H173 461 aa23.68■■□□□ 1.38
CPNE7-208ENST00000566398 FBXO3Q9UK99 471 aa23.68■■□□□ 1.38
CPNE7-208ENST00000566398 TRPM7Q96QT4 1865 aa23.67■■□□□ 1.38
CPNE7-208ENST00000566398 CIAO1O76071 339 aa23.67■■□□□ 1.38
CPNE7-208ENST00000566398 IFIT1P09914 478 aaKnown RBP23.67■■□□□ 1.38
CPNE7-208ENST00000566398 DLGAP5Q15398 846 aa23.67■■□□□ 1.38
CPNE7-208ENST00000566398 FBXO33Q7Z6M2 555 aa23.67■■□□□ 1.38
CPNE7-208ENST00000566398 MFSD14BQ5SR56 506 aa23.66■■□□□ 1.38
CPNE7-208ENST00000566398 FRAT2O75474 233 aaPredicted RBP23.65■■□□□ 1.38
CPNE7-208ENST00000566398 SLC5A1P13866 664 aa23.65■■□□□ 1.38
CPNE7-208ENST00000566398 FGFR2P21802 821 aa23.65■■□□□ 1.38
CPNE7-208ENST00000566398 MAP2K1Q02750 393 aaPredicted RBP23.65■■□□□ 1.38
CPNE7-208ENST00000566398 ATG9AQ7Z3C6 839 aa23.65■■□□□ 1.38
CPNE7-208ENST00000566398 APOBEC3FQ8IUX4 373 aaKnown RBP23.65■■□□□ 1.38
CPNE7-208ENST00000566398 ZBED3Q96IU2 234 aaPredicted RBP23.65■■□□□ 1.38
CPNE7-208ENST00000566398 SCAF8Q9UPN6 1271 aaKnown RBP23.65■■□□□ 1.38
CPNE7-208ENST00000566398 FTSJ3Q8IY81 847 aaKnown RBP23.64■■□□□ 1.37
CPNE7-208ENST00000566398 MTMR14Q8NCE2 650 aa23.64■■□□□ 1.37
CPNE7-208ENST00000566398 LPIN2Q92539 896 aa23.64■■□□□ 1.37
CPNE7-208ENST00000566398 WBP1LQ9NX94 342 aa23.64■■□□□ 1.37
CPNE7-208ENST00000566398 IQSEC3Q9UPP2 1182 aaPredicted RBP23.64■■□□□ 1.37
CPNE7-208ENST00000566398 SRGAP3O43295 1099 aa23.63■■□□□ 1.37
CPNE7-208ENST00000566398 GNAI2P04899 355 aa23.63■■□□□ 1.37
CPNE7-208ENST00000566398 IL15P40933 162 aaPredicted RBP23.63■■□□□ 1.37
CPNE7-208ENST00000566398 CHAF1AQ13111 956 aaPredicted RBP23.63■■□□□ 1.37
CPNE7-208ENST00000566398 CFAP100Q494V2 611 aa23.63■■□□□ 1.37
CPNE7-208ENST00000566398 TMEM57Q8N5G2 664 aa23.63■■□□□ 1.37
CPNE7-208ENST00000566398 COPRSQ9NQ92 184 aa23.63■■□□□ 1.37
CPNE7-208ENST00000566398 CEP126Q9P2H0 1117 aa23.63■■□□□ 1.37
CPNE7-208ENST00000566398 PA2G4Q9UQ80 394 aaKnown RBP23.63■■□□□ 1.37
CPNE7-208ENST00000566398 FOXN1O15353 648 aa23.62■■□□□ 1.37
CPNE7-208ENST00000566398 AOC2O75106 756 aa23.62■■□□□ 1.37
CPNE7-208ENST00000566398 MAP2K2P36507 400 aa23.62■■□□□ 1.37
CPNE7-208ENST00000566398 BCAMP50895 628 aa23.62■■□□□ 1.37
CPNE7-208ENST00000566398 MTX1Q13505 466 aa23.62■■□□□ 1.37
CPNE7-208ENST00000566398 THSD7BQ9C0I4 1608 aa23.62■■□□□ 1.37
CPNE7-208ENST00000566398 SPDYE2BA6NHP3 402 aa23.61■■□□□ 1.37
CPNE7-208ENST00000566398 MYO1BO43795 1136 aa23.61■■□□□ 1.37
CPNE7-208ENST00000566398 SPDYE6P0CI01 402 aa23.61■■□□□ 1.37
CPNE7-208ENST00000566398 RBM5P52756 815 aaKnown RBP eCLIP23.61■■□□□ 1.37
CPNE7-208ENST00000566398 FKBP1BP68106 108 aa23.61■■□□□ 1.37
CPNE7-208ENST00000566398 ATP2B3Q16720 1220 aa23.61■■□□□ 1.37
CPNE7-208ENST00000566398 TBC1D22AQ8WUA7 517 aa23.61■■□□□ 1.37
CPNE7-208ENST00000566398 TTF2Q9UNY4 1162 aaKnown RBP23.61■■□□□ 1.37
CPNE7-208ENST00000566398 COL13A1Q5TAT6 717 aaPredicted RBP23.6■■□□□ 1.37
CPNE7-208ENST00000566398 PRAMEF18Q5VWM3 479 aa23.6■■□□□ 1.37
CPNE7-208ENST00000566398 RGMBQ6NW40 437 aa23.6■■□□□ 1.37
CPNE7-208ENST00000566398 PCDHAC2Q9Y5I4 1007 aa23.6■■□□□ 1.37
CPNE7-208ENST00000566398 NF2P35240 595 aa23.59■■□□□ 1.37
CPNE7-208ENST00000566398 CTCFP49711 727 aaPredicted RBP23.59■■□□□ 1.37
CPNE7-208ENST00000566398 NOGQ13253 232 aa23.59■■□□□ 1.37
CPNE7-208ENST00000566398 DZIP1LQ8IYY4 767 aaKnown RBP23.59■■□□□ 1.37
CPNE7-208ENST00000566398 BEGAINQ9BUH8 593 aa23.59■■□□□ 1.37
CPNE7-208ENST00000566398 SERPINA10Q9UK55 444 aa23.59■■□□□ 1.37
CPNE7-208ENST00000566398 COL1A1P02452 1464 aaPredicted RBP23.58■■□□□ 1.37
CPNE7-208ENST00000566398 ZNF157P51786 506 aaPredicted RBP23.58■■□□□ 1.37
CPNE7-208ENST00000566398 CLRN2A0PK11 232 aa23.57■■□□□ 1.36
CPNE7-208ENST00000566398 ITPRIPQ8IWB1 547 aa23.57■■□□□ 1.36
CPNE7-208ENST00000566398 CCDC102AQ96A19 550 aa23.57■■□□□ 1.36
CPNE7-208ENST00000566398 PRMT6Q96LA8 375 aaPredicted RBP23.57■■□□□ 1.36
CPNE7-208ENST00000566398 TTLL12Q14166 644 aaPredicted RBP23.56■■□□□ 1.36
CPNE7-208ENST00000566398 DEFB129Q9H1M3 183 aa23.56■■□□□ 1.36
CPNE7-208ENST00000566398 VEZTQ9HBM0 779 aa23.56■■□□□ 1.36
CPNE7-208ENST00000566398 PPP2R3BQ9Y5P8 575 aa23.56■■□□□ 1.36
CPNE7-208ENST00000566398 PAPPA2Q9BXP8 1791 aa23.55■■□□□ 1.36
CPNE7-208ENST00000566398 CRKP46108 304 aa23.55■■□□□ 1.36
CPNE7-208ENST00000566398 GNL3LQ9NVN8 582 aaKnown RBP23.55■■□□□ 1.36
CPNE7-208ENST00000566398 FAM155AB1AL88 458 aaPredicted RBP23.54■■□□□ 1.36
CPNE7-208ENST00000566398 RLBP1P12271 317 aa23.54■■□□□ 1.36
CPNE7-208ENST00000566398 GRIK5Q16478 980 aa23.54■■□□□ 1.36
CPNE7-208ENST00000566398 WDR66Q8TBY9 1149 aa23.54■■□□□ 1.36
CPNE7-208ENST00000566398 SUGT1Q9Y2Z0 365 aa23.54■■□□□ 1.36
CPNE7-208ENST00000566398 AOX1Q06278 1338 aa23.54■■□□□ 1.36
CPNE7-208ENST00000566398 PNMA6EA0A0J9YXQ4 647 aa23.53■■□□□ 1.36
CPNE7-208ENST00000566398 SLC10A3P09131 477 aa23.53■■□□□ 1.36
CPNE7-208ENST00000566398 MOB2Q70IA6 237 aa23.53■■□□□ 1.36
CPNE7-208ENST00000566398 PRDM10Q9NQV6 1147 aa23.53■■□□□ 1.36
CPNE7-208ENST00000566398 MAST3O60307 1309 aa23.53■■□□□ 1.36
CPNE7-208ENST00000566398 UBE2Q2LH0YL09 131 aa23.52■■□□□ 1.36
CPNE7-208ENST00000566398 HSPA8P11142 646 aaKnown RBP23.52■■□□□ 1.36
CPNE7-208ENST00000566398 HDLBPQ00341 1268 aaKnown RBP23.52■■□□□ 1.36
CPNE7-208ENST00000566398 SPDYE2Q495Y8 402 aa23.52■■□□□ 1.36
CPNE7-208ENST00000566398 IFFO2Q5TF58 517 aa23.52■■□□□ 1.36
CPNE7-208ENST00000566398 TEKT1Q969V4 418 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms