RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 RSBN1LQ6PCB5 846 aaPredicted RBP13.34□□□□□ -0.27
NSMCE1-211ENST00000566087 ATF7IPQ6VMQ6 1270 aa13.34□□□□□ -0.27
NSMCE1-211ENST00000566087 PAPPA2Q9BXP8 1791 aa13.33□□□□□ -0.28
NSMCE1-211ENST00000566087 UBE2Q2LH0YL09 131 aa13.33□□□□□ -0.28
NSMCE1-211ENST00000566087 TBC1D8O95759 1140 aa13.33□□□□□ -0.28
NSMCE1-211ENST00000566087 MMP14P50281 582 aa13.33□□□□□ -0.28
NSMCE1-211ENST00000566087 ZNF280AP59817 542 aaPredicted RBP13.33□□□□□ -0.28
NSMCE1-211ENST00000566087 INTS3Q68E01 1043 aaKnown RBP13.33□□□□□ -0.28
NSMCE1-211ENST00000566087 PSME4Q14997 1843 aa13.33□□□□□ -0.28
NSMCE1-211ENST00000566087 ZNF804BA4D1E1 1349 aa13.33□□□□□ -0.28
NSMCE1-211ENST00000566087 WTIPA6NIX2 430 aaPredicted RBP13.32□□□□□ -0.28
NSMCE1-211ENST00000566087 CHRNDQ07001 517 aa13.32□□□□□ -0.28
NSMCE1-211ENST00000566087 MKRN3Q13064 507 aaKnown RBP13.32□□□□□ -0.28
NSMCE1-211ENST00000566087 RABL6Q3YEC7 729 aaPredicted RBP13.32□□□□□ -0.28
NSMCE1-211ENST00000566087 PRPF38BQ5VTL8 546 aaKnown RBP13.32□□□□□ -0.28
NSMCE1-211ENST00000566087 FTSJ3Q8IY81 847 aaKnown RBP13.32□□□□□ -0.28
NSMCE1-211ENST00000566087 SUCLG2Q96I99 432 aa13.32□□□□□ -0.28
NSMCE1-211ENST00000566087 MXD3Q9BW11 206 aa13.32□□□□□ -0.28
NSMCE1-211ENST00000566087 COA1Q9GZY4 146 aa13.32□□□□□ -0.28
NSMCE1-211ENST00000566087 BICC1Q9H694 974 aaKnown RBP13.32□□□□□ -0.28
NSMCE1-211ENST00000566087 MYOZ2Q9NPC6 264 aa13.32□□□□□ -0.28
NSMCE1-211ENST00000566087 MROH5Q6ZUA9 1318 aa13.32□□□□□ -0.28
NSMCE1-211ENST00000566087 USP17L8P0C7I0 530 aa13.31□□□□□ -0.28
NSMCE1-211ENST00000566087 AGBL3Q8NEM8 1001 aa13.31□□□□□ -0.28
NSMCE1-211ENST00000566087 ZNF296Q8WUU4 475 aaPredicted RBP13.31□□□□□ -0.28
NSMCE1-211ENST00000566087 GMLQ99445 158 aa13.31□□□□□ -0.28
NSMCE1-211ENST00000566087 FBXO3Q9UK99 471 aa13.31□□□□□ -0.28
NSMCE1-211ENST00000566087 HDAC9Q9UKV0 1011 aa13.31□□□□□ -0.28
NSMCE1-211ENST00000566087 MED23Q9ULK4 1368 aa13.31□□□□□ -0.28
NSMCE1-211ENST00000566087 SPEF2Q9C093 1822 aa13.3□□□□□ -0.28
NSMCE1-211ENST00000566087 USP17L3A6NCW0 530 aa13.3□□□□□ -0.28
NSMCE1-211ENST00000566087 USP17L4A6NCW7 530 aa13.3□□□□□ -0.28
NSMCE1-211ENST00000566087 BCAR3O75815 825 aa13.3□□□□□ -0.28
NSMCE1-211ENST00000566087 RRP1P56182 461 aaKnown RBP13.3□□□□□ -0.28
NSMCE1-211ENST00000566087 TTLL12Q14166 644 aaPredicted RBP13.3□□□□□ -0.28
NSMCE1-211ENST00000566087 NBPF9Q3BBW0 867 aa13.3□□□□□ -0.28
NSMCE1-211ENST00000566087 EPHA10Q5JZY3 1008 aa13.3□□□□□ -0.28
NSMCE1-211ENST00000566087 USP17L1Q7RTZ2 530 aa13.3□□□□□ -0.28
NSMCE1-211ENST00000566087 REM2Q8IYK8 340 aaPredicted RBP13.3□□□□□ -0.28
NSMCE1-211ENST00000566087 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.3□□□□□ -0.28
NSMCE1-211ENST00000566087 CHMP4BQ9H444 224 aaKnown RBP13.3□□□□□ -0.28
NSMCE1-211ENST00000566087 PLIN1O60240 522 aa13.29□□□□□ -0.28
NSMCE1-211ENST00000566087 TRIM27P14373 513 aa13.29□□□□□ -0.28
NSMCE1-211ENST00000566087 FKBP1BP68106 108 aa13.29□□□□□ -0.28
NSMCE1-211ENST00000566087 UBE4AQ14139 1066 aa13.29□□□□□ -0.28
NSMCE1-211ENST00000566087 C15orf52Q6ZUT6 534 aaKnown RBP13.29□□□□□ -0.28
NSMCE1-211ENST00000566087 ZNF804AQ7Z570 1209 aa13.29□□□□□ -0.28
NSMCE1-211ENST00000566087 OGFOD1Q8N543 542 aa13.29□□□□□ -0.28
NSMCE1-211ENST00000566087 FBXW7Q969H0 707 aa13.29□□□□□ -0.28
NSMCE1-211ENST00000566087 MYO3BQ8WXR4 1341 aa13.29□□□□□ -0.28
NSMCE1-211ENST00000566087 ZNF609O15014 1411 aa13.29□□□□□ -0.28
NSMCE1-211ENST00000566087 ZNF646O15015 1829 aaPredicted RBP13.28□□□□□ -0.28
NSMCE1-211ENST00000566087 GNAI2P04899 355 aa13.28□□□□□ -0.28
NSMCE1-211ENST00000566087 PRKG1Q13976 671 aa13.28□□□□□ -0.28
NSMCE1-211ENST00000566087 STRIP1Q5VSL9 837 aa13.28□□□□□ -0.28
NSMCE1-211ENST00000566087 ERICH6BQ5W0A0 696 aa13.28□□□□□ -0.28
NSMCE1-211ENST00000566087 DZIP1LQ8IYY4 767 aaKnown RBP13.28□□□□□ -0.28
NSMCE1-211ENST00000566087 KAZALD1Q96I82 304 aa13.28□□□□□ -0.28
NSMCE1-211ENST00000566087 ZNF594Q96JF6 807 aaPredicted RBP13.28□□□□□ -0.28
NSMCE1-211ENST00000566087 R3HDMLQ9H3Y0 253 aa13.28□□□□□ -0.28
NSMCE1-211ENST00000566087 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.28□□□□□ -0.28
NSMCE1-211ENST00000566087 PITPNM2Q9BZ72 1349 aa13.28□□□□□ -0.28
NSMCE1-211ENST00000566087 GPR25O00155 361 aa13.27□□□□□ -0.29
NSMCE1-211ENST00000566087 TAF5LO75529 589 aa13.27□□□□□ -0.29
NSMCE1-211ENST00000566087 PKN2Q16513 984 aaKnown RBP13.27□□□□□ -0.29
NSMCE1-211ENST00000566087 CAVIN4Q5BKX8 364 aa13.27□□□□□ -0.29
NSMCE1-211ENST00000566087 METTL24Q5JXM2 366 aa13.27□□□□□ -0.29
NSMCE1-211ENST00000566087 VPS37DQ86XT2 251 aa13.27□□□□□ -0.29
NSMCE1-211ENST00000566087 CLUAP1Q96AJ1 413 aa13.27□□□□□ -0.29
NSMCE1-211ENST00000566087 RIPOR2Q9Y4F9 1068 aa13.27□□□□□ -0.29
NSMCE1-211ENST00000566087 SASH1O94885 1247 aa13.26□□□□□ -0.29
NSMCE1-211ENST00000566087 PDE8BO95263 885 aa13.26□□□□□ -0.29
NSMCE1-211ENST00000566087 TM4SF4P48230 202 aa13.26□□□□□ -0.29
NSMCE1-211ENST00000566087 TTLL5Q6EMB2 1281 aa13.26□□□□□ -0.29
NSMCE1-211ENST00000566087 ANKRD44Q8N8A2 993 aa13.26□□□□□ -0.29
NSMCE1-211ENST00000566087 HELBQ8NG08 1087 aaPredicted RBP13.26□□□□□ -0.29
NSMCE1-211ENST00000566087 FZD1Q9UP38 647 aa13.26□□□□□ -0.29
NSMCE1-211ENST00000566087 LRRFIP2Q9Y608 721 aaKnown RBP13.26□□□□□ -0.29
NSMCE1-211ENST00000566087 EYA2O00167 538 aa13.25□□□□□ -0.29
NSMCE1-211ENST00000566087 WNT10BO00744 389 aa13.25□□□□□ -0.29
NSMCE1-211ENST00000566087 IFIT1P09914 478 aaKnown RBP13.25□□□□□ -0.29
NSMCE1-211ENST00000566087 PTPN12Q05209 780 aaKnown RBP13.25□□□□□ -0.29
NSMCE1-211ENST00000566087 DACT2Q5SW24 774 aa13.25□□□□□ -0.29
NSMCE1-211ENST00000566087 CD209Q9NNX6 404 aa13.25□□□□□ -0.29
NSMCE1-211ENST00000566087 CEP126Q9P2H0 1117 aa13.25□□□□□ -0.29
NSMCE1-211ENST00000566087 FRAT2O75474 233 aaPredicted RBP13.24□□□□□ -0.29
NSMCE1-211ENST00000566087 CIAO1O76071 339 aa13.24□□□□□ -0.29
NSMCE1-211ENST00000566087 HIBADHP31937 336 aaKnown RBP13.24□□□□□ -0.29
NSMCE1-211ENST00000566087 IL15P40933 162 aaPredicted RBP13.24□□□□□ -0.29
NSMCE1-211ENST00000566087 FBXO46Q6PJ61 603 aaPredicted RBP13.24□□□□□ -0.29
NSMCE1-211ENST00000566087 MEIS3Q99687 375 aa13.24□□□□□ -0.29
NSMCE1-211ENST00000566087 U3KPZ7 1027 aaPredicted RBP13.24□□□□□ -0.29
NSMCE1-211ENST00000566087 SRGAP3O43295 1099 aa13.23□□□□□ -0.29
NSMCE1-211ENST00000566087 FKTNO75072 461 aa13.23□□□□□ -0.29
NSMCE1-211ENST00000566087 IL1R1P14778 569 aa13.23□□□□□ -0.29
NSMCE1-211ENST00000566087 NF2P35240 595 aa13.23□□□□□ -0.29
NSMCE1-211ENST00000566087 IRX6P78412 446 aaPredicted RBP13.23□□□□□ -0.29
NSMCE1-211ENST00000566087 PUM3Q15397 648 aaKnown RBP13.23□□□□□ -0.29
NSMCE1-211ENST00000566087 TXNRD3Q86VQ6 643 aa13.23□□□□□ -0.29
NSMCE1-211ENST00000566087 ITPRIPQ8IWB1 547 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms