RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 HDAC9Q9UKV0 1011 aa19.15■□□□□ 0.66
COMMD4-212ENST00000565517 TMEM88BA6NKF7 163 aa19.14■□□□□ 0.65
COMMD4-212ENST00000565517 BCAMP50895 628 aa19.14■□□□□ 0.65
COMMD4-212ENST00000565517 HTRA3P83110 453 aa19.14■□□□□ 0.65
COMMD4-212ENST00000565517 ATP2B3Q16720 1220 aa19.14■□□□□ 0.65
COMMD4-212ENST00000565517 CERS5Q8N5B7 392 aa19.14■□□□□ 0.65
COMMD4-212ENST00000565517 DCPSQ96C86 337 aaKnown RBP19.14■□□□□ 0.65
COMMD4-212ENST00000565517 CHMP4BQ9H444 224 aaKnown RBP19.14■□□□□ 0.65
COMMD4-212ENST00000565517 DDX19BQ9UMR2 479 aa19.14■□□□□ 0.65
COMMD4-212ENST00000565517 ARAP2Q8WZ64 1704 aa19.14■□□□□ 0.65
COMMD4-212ENST00000565517 SCARF1Q14162 830 aa19.13■□□□□ 0.65
COMMD4-212ENST00000565517 KIAA0825Q8IV33 1275 aa19.13■□□□□ 0.65
COMMD4-212ENST00000565517 GLIS2Q9BZE0 524 aaPredicted RBP19.13■□□□□ 0.65
COMMD4-212ENST00000565517 AKAP2Q9Y2D5 859 aa19.13■□□□□ 0.65
COMMD4-212ENST00000565517 ZBTB22O15209 634 aa19.12■□□□□ 0.65
COMMD4-212ENST00000565517 G3BP1Q13283 466 aaKnown RBP eCLIP19.12■□□□□ 0.65
COMMD4-212ENST00000565517 TBC1D22AQ8WUA7 517 aa19.12■□□□□ 0.65
COMMD4-212ENST00000565517 YTHDC1Q96MU7 727 aaKnown RBP19.12■□□□□ 0.65
COMMD4-212ENST00000565517 C1orf115Q9H7X2 142 aa19.12■□□□□ 0.65
COMMD4-212ENST00000565517 COG6Q9Y2V7 657 aa19.12■□□□□ 0.65
COMMD4-212ENST00000565517 PITPNM2Q9BZ72 1349 aa19.11■□□□□ 0.65
COMMD4-212ENST00000565517 TRAF5O00463 557 aa19.11■□□□□ 0.65
COMMD4-212ENST00000565517 FRAT2O75474 233 aaPredicted RBP19.11■□□□□ 0.65
COMMD4-212ENST00000565517 MFSD14BQ5SR56 506 aa19.11■□□□□ 0.65
COMMD4-212ENST00000565517 MTMR14Q8NCE2 650 aa19.11■□□□□ 0.65
COMMD4-212ENST00000565517 KLRG1Q96E93 195 aa19.11■□□□□ 0.65
COMMD4-212ENST00000565517 ECM29Q5VYK3 1845 aa19.11■□□□□ 0.65
COMMD4-212ENST00000565517 WNT10BO00744 389 aa19.1■□□□□ 0.65
COMMD4-212ENST00000565517 TFCP2Q12800 502 aa19.1■□□□□ 0.65
COMMD4-212ENST00000565517 CEP85Q6P2H3 762 aa19.1■□□□□ 0.65
COMMD4-212ENST00000565517 KRT26Q7Z3Y9 468 aa19.1■□□□□ 0.65
COMMD4-212ENST00000565517 USP48Q86UV5 1035 aa19.1■□□□□ 0.65
COMMD4-212ENST00000565517 ZBED3Q96IU2 234 aaPredicted RBP19.1■□□□□ 0.65
COMMD4-212ENST00000565517 ZBTB40Q9NUA8 1239 aa19.1■□□□□ 0.65
COMMD4-212ENST00000565517 GGA3Q9NZ52 723 aa19.1■□□□□ 0.65
COMMD4-212ENST00000565517 FMR1Q06787 632 aaKnown RBP eCLIP19.09■□□□□ 0.65
COMMD4-212ENST00000565517 NBPF9Q3BBW0 867 aa19.09■□□□□ 0.65
COMMD4-212ENST00000565517 ANGEL2Q5VTE6 544 aaKnown RBP19.09■□□□□ 0.65
COMMD4-212ENST00000565517 CST9Q5W186 159 aa19.09■□□□□ 0.65
COMMD4-212ENST00000565517 SULF1Q8IWU6 871 aa19.09■□□□□ 0.65
COMMD4-212ENST00000565517 GNL3LQ9NVN8 582 aaKnown RBP19.09■□□□□ 0.65
COMMD4-212ENST00000565517 IQSEC3Q9UPP2 1182 aaPredicted RBP19.09■□□□□ 0.65
COMMD4-212ENST00000565517 JAG2Q9Y219 1238 aa19.09■□□□□ 0.65
COMMD4-212ENST00000565517 NOP58Q9Y2X3 529 aaKnown RBP19.09■□□□□ 0.65
COMMD4-212ENST00000565517 ASTN2O75129 1339 aaPredicted RBP19.08■□□□□ 0.65
COMMD4-212ENST00000565517 TIMM10P62072 90 aa19.08■□□□□ 0.64
COMMD4-212ENST00000565517 SUGT1Q9Y2Z0 365 aa19.08■□□□□ 0.64
COMMD4-212ENST00000565517 A0A1B0GUL7 405 aa19.07■□□□□ 0.64
COMMD4-212ENST00000565517 F8W031 263 aaPredicted RBP19.07■□□□□ 0.64
COMMD4-212ENST00000565517 SEMA3EO15041 775 aa19.07■□□□□ 0.64
COMMD4-212ENST00000565517 SURF6O75683 361 aaKnown RBP19.07■□□□□ 0.64
COMMD4-212ENST00000565517 CHAF1AQ13111 956 aaPredicted RBP19.07■□□□□ 0.64
COMMD4-212ENST00000565517 DLGAP5Q15398 846 aa19.07■□□□□ 0.64
COMMD4-212ENST00000565517 RPAP2Q8IXW5 612 aaPredicted RBP19.07■□□□□ 0.64
COMMD4-212ENST00000565517 WDR66Q8TBY9 1149 aa19.07■□□□□ 0.64
COMMD4-212ENST00000565517 GPR108Q9NPR9 543 aa19.07■□□□□ 0.64
COMMD4-212ENST00000565517 CELF2O95319 508 aaKnown RBP19.06■□□□□ 0.64
COMMD4-212ENST00000565517 HDLBPQ00341 1268 aaKnown RBP19.06■□□□□ 0.64
COMMD4-212ENST00000565517 C20orf194Q5TEA3 1177 aa19.06■□□□□ 0.64
COMMD4-212ENST00000565517 CCDC102BQ68D86 513 aa19.06■□□□□ 0.64
COMMD4-212ENST00000565517 MRIQ9BWK5 157 aa19.06■□□□□ 0.64
COMMD4-212ENST00000565517 SERPINA10Q9UK55 444 aa19.06■□□□□ 0.64
COMMD4-212ENST00000565517 TTF2Q9UNY4 1162 aaKnown RBP19.06■□□□□ 0.64
COMMD4-212ENST00000565517 CNTNAP1P78357 1384 aa19.06■□□□□ 0.64
COMMD4-212ENST00000565517 RASSF10A6NK89 507 aa19.05■□□□□ 0.64
COMMD4-212ENST00000565517 ADM5C9JUS6 153 aa19.05■□□□□ 0.64
COMMD4-212ENST00000565517 ADORA1P30542 326 aa19.05■□□□□ 0.64
COMMD4-212ENST00000565517 PHKA1P46020 1223 aa19.05■□□□□ 0.64
COMMD4-212ENST00000565517 CFAP100Q494V2 611 aa19.05■□□□□ 0.64
COMMD4-212ENST00000565517 JMYQ8N9B5 988 aa19.05■□□□□ 0.64
COMMD4-212ENST00000565517 XAGE2Q96GT9 111 aa19.05■□□□□ 0.64
COMMD4-212ENST00000565517 DENND2AQ9ULE3 1009 aa19.05■□□□□ 0.64
COMMD4-212ENST00000565517 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.05■□□□□ 0.64
COMMD4-212ENST00000565517 SPDYE2BA6NHP3 402 aa19.04■□□□□ 0.64
COMMD4-212ENST00000565517 SPDYE6P0CI01 402 aa19.04■□□□□ 0.64
COMMD4-212ENST00000565517 OS9Q13438 667 aaPredicted RBP19.04■□□□□ 0.64
COMMD4-212ENST00000565517 DEFB115Q30KQ5 88 aa19.04■□□□□ 0.64
COMMD4-212ENST00000565517 NEUROD6Q96NK8 337 aa19.04■□□□□ 0.64
COMMD4-212ENST00000565517 ABT1Q9ULW3 272 aaKnown RBP19.04■□□□□ 0.64
COMMD4-212ENST00000565517 TLL2Q9Y6L7 1015 aa19.04■□□□□ 0.64
COMMD4-212ENST00000565517 PDS5AQ29RF7 1337 aaKnown RBP19.03■□□□□ 0.64
COMMD4-212ENST00000565517 MYO1BO43795 1136 aa19.03■□□□□ 0.64
COMMD4-212ENST00000565517 HMMRO75330 724 aa19.03■□□□□ 0.64
COMMD4-212ENST00000565517 APOBEC3FQ8IUX4 373 aaKnown RBP19.03■□□□□ 0.64
COMMD4-212ENST00000565517 PRMT6Q96LA8 375 aaPredicted RBP19.03■□□□□ 0.64
COMMD4-212ENST00000565517 MAST3O60307 1309 aa19.02■□□□□ 0.64
COMMD4-212ENST00000565517 SALL1Q9NSC2 1324 aa19.02■□□□□ 0.64
COMMD4-212ENST00000565517 RBM5P52756 815 aaKnown RBP eCLIP19.02■□□□□ 0.64
COMMD4-212ENST00000565517 GRIK5Q16478 980 aa19.02■□□□□ 0.64
COMMD4-212ENST00000565517 HSP90AB4PQ58FF6 505 aa19.02■□□□□ 0.64
COMMD4-212ENST00000565517 DLK2Q6UY11 383 aa19.02■□□□□ 0.64
COMMD4-212ENST00000565517 SAPCD2Q86UD0 394 aa19.02■□□□□ 0.64
COMMD4-212ENST00000565517 ERC1Q8IUD2 1116 aa19.02■□□□□ 0.64
COMMD4-212ENST00000565517 CDCA5Q96FF9 252 aa19.02■□□□□ 0.64
COMMD4-212ENST00000565517 HHIPL1Q96JK4 782 aa19.02■□□□□ 0.64
COMMD4-212ENST00000565517 ZNF408Q9H9D4 720 aa19.02■□□□□ 0.64
COMMD4-212ENST00000565517 MKRN1Q9UHC7 482 aaKnown RBP19.02■□□□□ 0.64
COMMD4-212ENST00000565517 COL1A1P02452 1464 aaPredicted RBP19.02■□□□□ 0.63
COMMD4-212ENST00000565517 CRKP46108 304 aa19.01■□□□□ 0.63
COMMD4-212ENST00000565517 TNNI3KQ59H18 835 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms