RNA–Protein interactions for RNA: ENST00000565345.5

SCAMP2-206, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-206ENST00000565345 VGLL2Q8N8G2 317 aa23.83■■□□□ 1.41
SCAMP2-206ENST00000565345 FAM84BQ96KN1 310 aaPredicted RBP23.83■■□□□ 1.41
SCAMP2-206ENST00000565345 HIBADHP31937 336 aaKnown RBP23.82■■□□□ 1.4
SCAMP2-206ENST00000565345 RFX5P48382 616 aaPredicted RBP23.82■■□□□ 1.4
SCAMP2-206ENST00000565345 NOGQ13253 232 aa23.82■■□□□ 1.4
SCAMP2-206ENST00000565345 RGMBQ6NW40 437 aa23.82■■□□□ 1.4
SCAMP2-206ENST00000565345 HDAC5Q9UQL6 1122 aa23.82■■□□□ 1.4
SCAMP2-206ENST00000565345 PDE8BO95263 885 aa23.81■■□□□ 1.4
SCAMP2-206ENST00000565345 UBTFL1P0CB47 393 aaPredicted RBP23.81■■□□□ 1.4
SCAMP2-206ENST00000565345 TNS4Q8IZW8 715 aa23.81■■□□□ 1.4
SCAMP2-206ENST00000565345 PAPPA2Q9BXP8 1791 aa23.8■■□□□ 1.4
SCAMP2-206ENST00000565345 HSPA8P11142 646 aaKnown RBP23.8■■□□□ 1.4
SCAMP2-206ENST00000565345 GYG1P46976 350 aa23.8■■□□□ 1.4
SCAMP2-206ENST00000565345 METTL24Q5JXM2 366 aa23.8■■□□□ 1.4
SCAMP2-206ENST00000565345 CCDC102AQ96A19 550 aa23.8■■□□□ 1.4
SCAMP2-206ENST00000565345 BEGAINQ9BUH8 593 aa23.8■■□□□ 1.4
SCAMP2-206ENST00000565345 FAM155AB1AL88 458 aaPredicted RBP23.79■■□□□ 1.4
SCAMP2-206ENST00000565345 PTPN12Q05209 780 aaKnown RBP23.79■■□□□ 1.4
SCAMP2-206ENST00000565345 FBXO33Q7Z6M2 555 aa23.79■■□□□ 1.4
SCAMP2-206ENST00000565345 APOBEC3FQ8IUX4 373 aaKnown RBP23.79■■□□□ 1.4
SCAMP2-206ENST00000565345 KLHDC4Q8TBB5 520 aa23.79■■□□□ 1.4
SCAMP2-206ENST00000565345 FBXO3Q9UK99 471 aa23.79■■□□□ 1.4
SCAMP2-206ENST00000565345 ECM29Q5VYK3 1845 aa23.79■■□□□ 1.4
SCAMP2-206ENST00000565345 EYA2O00167 538 aa23.78■■□□□ 1.4
SCAMP2-206ENST00000565345 LBX1P52954 281 aa23.78■■□□□ 1.4
SCAMP2-206ENST00000565345 DLGAP5Q15398 846 aa23.78■■□□□ 1.4
SCAMP2-206ENST00000565345 INTS3Q68E01 1043 aaKnown RBP23.78■■□□□ 1.4
SCAMP2-206ENST00000565345 ARAP2Q8WZ64 1704 aa23.78■■□□□ 1.4
SCAMP2-206ENST00000565345 COL1A1P02452 1464 aaPredicted RBP23.77■■□□□ 1.4
SCAMP2-206ENST00000565345 CA12O43570 354 aa23.77■■□□□ 1.4
SCAMP2-206ENST00000565345 IPO8O15397 1037 aaKnown RBP23.76■■□□□ 1.39
SCAMP2-206ENST00000565345 FGFR2P21802 821 aa23.76■■□□□ 1.39
SCAMP2-206ENST00000565345 CAVIN4Q5BKX8 364 aa23.76■■□□□ 1.39
SCAMP2-206ENST00000565345 ZNF157P51786 506 aaPredicted RBP23.75■■□□□ 1.39
SCAMP2-206ENST00000565345 HNRNPUQ00839 825 aaKnown RBP eCLIP23.75■■□□□ 1.39
SCAMP2-206ENST00000565345 PUM3Q15397 648 aaKnown RBP23.75■■□□□ 1.39
SCAMP2-206ENST00000565345 CFAP100Q494V2 611 aa23.75■■□□□ 1.39
SCAMP2-206ENST00000565345 MFSD14BQ5SR56 506 aa23.75■■□□□ 1.39
SCAMP2-206ENST00000565345 SCAF8Q9UPN6 1271 aaKnown RBP23.75■■□□□ 1.39
SCAMP2-206ENST00000565345 SPDYE2BA6NHP3 402 aa23.74■■□□□ 1.39
SCAMP2-206ENST00000565345 CIAO1O76071 339 aa23.74■■□□□ 1.39
SCAMP2-206ENST00000565345 SLC10A3P09131 477 aa23.74■■□□□ 1.39
SCAMP2-206ENST00000565345 SPDYE6P0CI01 402 aa23.74■■□□□ 1.39
SCAMP2-206ENST00000565345 NF2P35240 595 aa23.74■■□□□ 1.39
SCAMP2-206ENST00000565345 ATG9AQ7Z3C6 839 aa23.74■■□□□ 1.39
SCAMP2-206ENST00000565345 VPS37DQ86XT2 251 aa23.74■■□□□ 1.39
SCAMP2-206ENST00000565345 JAG2Q9Y219 1238 aa23.74■■□□□ 1.39
SCAMP2-206ENST00000565345 F8W031 263 aaPredicted RBP23.73■■□□□ 1.39
SCAMP2-206ENST00000565345 ZIC5Q96T25 663 aa23.73■■□□□ 1.39
SCAMP2-206ENST00000565345 MEIS3Q99687 375 aa23.73■■□□□ 1.39
SCAMP2-206ENST00000565345 SERPINA10Q9UK55 444 aa23.73■■□□□ 1.39
SCAMP2-206ENST00000565345 PPP2R3BQ9Y5P8 575 aa23.73■■□□□ 1.39
SCAMP2-206ENST00000565345 LRRFIP2Q9Y608 721 aaKnown RBP23.73■■□□□ 1.39
SCAMP2-206ENST00000565345 MYO1BO43795 1136 aa23.72■■□□□ 1.39
SCAMP2-206ENST00000565345 GNAI3P08754 354 aa23.72■■□□□ 1.39
SCAMP2-206ENST00000565345 IFIT1P09914 478 aaKnown RBP23.72■■□□□ 1.39
SCAMP2-206ENST00000565345 TRIM27P14373 513 aa23.72■■□□□ 1.39
SCAMP2-206ENST00000565345 PRAMEF18Q5VWM3 479 aa23.72■■□□□ 1.39
SCAMP2-206ENST00000565345 ATF7IPQ6VMQ6 1270 aa23.72■■□□□ 1.39
SCAMP2-206ENST00000565345 TBC1D22AQ8WUA7 517 aa23.72■■□□□ 1.39
SCAMP2-206ENST00000565345 LPIN2Q92539 896 aa23.72■■□□□ 1.39
SCAMP2-206ENST00000565345 PRMT6Q96LA8 375 aaPredicted RBP23.72■■□□□ 1.39
SCAMP2-206ENST00000565345 BCAR3O75815 825 aa23.71■■□□□ 1.39
SCAMP2-206ENST00000565345 RASAL3Q86YV0 1011 aa23.71■■□□□ 1.39
SCAMP2-206ENST00000565345 DEFB129Q9H1M3 183 aa23.71■■□□□ 1.39
SCAMP2-206ENST00000565345 TTF2Q9UNY4 1162 aaKnown RBP23.71■■□□□ 1.39
SCAMP2-206ENST00000565345 PCDHAC2Q9Y5I4 1007 aa23.71■■□□□ 1.39
SCAMP2-206ENST00000565345 KIF23Q02241 960 aaPredicted RBP23.7■■□□□ 1.38
SCAMP2-206ENST00000565345 REM2Q8IYK8 340 aaPredicted RBP23.7■■□□□ 1.38
SCAMP2-206ENST00000565345 COPRSQ9NQ92 184 aa23.7■■□□□ 1.38
SCAMP2-206ENST00000565345 SLC5A1P13866 664 aa23.69■■□□□ 1.38
SCAMP2-206ENST00000565345 IL15P40933 162 aaPredicted RBP23.69■■□□□ 1.38
SCAMP2-206ENST00000565345 BCAMP50895 628 aa23.69■■□□□ 1.38
SCAMP2-206ENST00000565345 HDLBPQ00341 1268 aaKnown RBP23.69■■□□□ 1.38
SCAMP2-206ENST00000565345 MTX1Q13505 466 aa23.69■■□□□ 1.38
SCAMP2-206ENST00000565345 UBE2Q2LH0YL09 131 aa23.68■■□□□ 1.38
SCAMP2-206ENST00000565345 MOB2Q70IA6 237 aa23.68■■□□□ 1.38
SCAMP2-206ENST00000565345 SAGE1Q9NXZ1 904 aa23.68■■□□□ 1.38
SCAMP2-206ENST00000565345 SUGT1Q9Y2Z0 365 aa23.68■■□□□ 1.38
SCAMP2-206ENST00000565345 ZBTB22O15209 634 aa23.67■■□□□ 1.38
SCAMP2-206ENST00000565345 FRAT2O75474 233 aaPredicted RBP23.67■■□□□ 1.38
SCAMP2-206ENST00000565345 RBM5P52756 815 aaKnown RBP eCLIP23.67■■□□□ 1.38
SCAMP2-206ENST00000565345 ARMC9Q7Z3E5 817 aa23.67■■□□□ 1.38
SCAMP2-206ENST00000565345 FRAT1Q92837 279 aaPredicted RBP23.67■■□□□ 1.38
SCAMP2-206ENST00000565345 MRIQ9BWK5 157 aa23.67■■□□□ 1.38
SCAMP2-206ENST00000565345 SIL1Q9H173 461 aa23.67■■□□□ 1.38
SCAMP2-206ENST00000565345 CEP126Q9P2H0 1117 aa23.67■■□□□ 1.38
SCAMP2-206ENST00000565345 IQSEC3Q9UPP2 1182 aaPredicted RBP23.67■■□□□ 1.38
SCAMP2-206ENST00000565345 AOX1Q06278 1338 aa23.66■■□□□ 1.38
SCAMP2-206ENST00000565345 ZBED9Q6R2W3 1325 aa23.66■■□□□ 1.38
SCAMP2-206ENST00000565345 CLRN2A0PK11 232 aa23.66■■□□□ 1.38
SCAMP2-206ENST00000565345 CRKP46108 304 aa23.66■■□□□ 1.38
SCAMP2-206ENST00000565345 TTLL12Q14166 644 aaPredicted RBP23.66■■□□□ 1.38
SCAMP2-206ENST00000565345 MAP3K11Q16584 847 aa23.66■■□□□ 1.38
SCAMP2-206ENST00000565345 SPDYE2Q495Y8 402 aa23.66■■□□□ 1.38
SCAMP2-206ENST00000565345 CSRNP1Q96S65 589 aa23.66■■□□□ 1.38
SCAMP2-206ENST00000565345 CHAF1AQ13111 956 aaPredicted RBP23.65■■□□□ 1.38
SCAMP2-206ENST00000565345 LDLRAD1Q5T700 205 aa23.65■■□□□ 1.38
SCAMP2-206ENST00000565345 ZKSCAN2Q63HK3 967 aa23.65■■□□□ 1.38
SCAMP2-206ENST00000565345 DZIP1LQ8IYY4 767 aaKnown RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms