RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 BEGAINQ9BUH8 593 aa12.62□□□□□ -0.39
CMTM3-209ENST00000565003 HDAC9Q9UKV0 1011 aa12.62□□□□□ -0.39
CMTM3-209ENST00000565003 NOB1Q9ULX3 412 aaKnown RBP12.62□□□□□ -0.39
CMTM3-209ENST00000565003 MROH5Q6ZUA9 1318 aa12.62□□□□□ -0.39
CMTM3-209ENST00000565003 F8W031 263 aaPredicted RBP12.61□□□□□ -0.39
CMTM3-209ENST00000565003 GYG1P46976 350 aa12.61□□□□□ -0.39
CMTM3-209ENST00000565003 MMP14P50281 582 aa12.61□□□□□ -0.39
CMTM3-209ENST00000565003 ZNF157P51786 506 aaPredicted RBP12.61□□□□□ -0.39
CMTM3-209ENST00000565003 MOB2Q70IA6 237 aa12.61□□□□□ -0.39
CMTM3-209ENST00000565003 VGLL2Q8N8G2 317 aa12.61□□□□□ -0.39
CMTM3-209ENST00000565003 PCDHAC2Q9Y5I4 1007 aa12.61□□□□□ -0.39
CMTM3-209ENST00000565003 SLC10A3P09131 477 aa12.6□□□□□ -0.39
CMTM3-209ENST00000565003 RARSP54136 660 aaKnown RBP12.6□□□□□ -0.39
CMTM3-209ENST00000565003 FKBP1AP62942 108 aaKnown RBP12.6□□□□□ -0.39
CMTM3-209ENST00000565003 FKBP1BP68106 108 aa12.6□□□□□ -0.39
CMTM3-209ENST00000565003 TDRD7Q8NHU6 1098 aaKnown RBP12.6□□□□□ -0.39
CMTM3-209ENST00000565003 FAM84BQ96KN1 310 aaPredicted RBP12.6□□□□□ -0.39
CMTM3-209ENST00000565003 FAM205AQ6ZU69 1335 aa12.6□□□□□ -0.39
CMTM3-209ENST00000565003 HIBADHP31937 336 aaKnown RBP12.59□□□□□ -0.39
CMTM3-209ENST00000565003 RFX5P48382 616 aaPredicted RBP12.59□□□□□ -0.39
CMTM3-209ENST00000565003 DLGAP5Q15398 846 aa12.59□□□□□ -0.39
CMTM3-209ENST00000565003 METTL24Q5JXM2 366 aa12.59□□□□□ -0.39
CMTM3-209ENST00000565003 RASAL3Q86YV0 1011 aa12.59□□□□□ -0.39
CMTM3-209ENST00000565003 APOBEC3FQ8IUX4 373 aaKnown RBP12.59□□□□□ -0.39
CMTM3-209ENST00000565003 CCDC102AQ96A19 550 aa12.59□□□□□ -0.39
CMTM3-209ENST00000565003 ARAP2Q8WZ64 1704 aa12.59□□□□□ -0.39
CMTM3-209ENST00000565003 AOX1Q06278 1338 aa12.59□□□□□ -0.39
CMTM3-209ENST00000565003 SPDYE2BA6NHP3 402 aa12.58□□□□□ -0.4
CMTM3-209ENST00000565003 CA12O43570 354 aa12.58□□□□□ -0.4
CMTM3-209ENST00000565003 PDE8BO95263 885 aa12.58□□□□□ -0.4
CMTM3-209ENST00000565003 UBTFL1P0CB47 393 aaPredicted RBP12.58□□□□□ -0.4
CMTM3-209ENST00000565003 SPDYE6P0CI01 402 aa12.58□□□□□ -0.4
CMTM3-209ENST00000565003 KIF23Q02241 960 aaPredicted RBP12.58□□□□□ -0.4
CMTM3-209ENST00000565003 CFAP100Q494V2 611 aa12.58□□□□□ -0.4
CMTM3-209ENST00000565003 MFSD14BQ5SR56 506 aa12.58□□□□□ -0.4
CMTM3-209ENST00000565003 MIER1Q8N108 512 aa12.58□□□□□ -0.4
CMTM3-209ENST00000565003 MTMR14Q8NCE2 650 aa12.58□□□□□ -0.4
CMTM3-209ENST00000565003 API5Q9BZZ5 524 aaKnown RBP12.58□□□□□ -0.4
CMTM3-209ENST00000565003 ECM29Q5VYK3 1845 aa12.58□□□□□ -0.4
CMTM3-209ENST00000565003 UBE2Q2LH0YL09 131 aa12.57□□□□□ -0.4
CMTM3-209ENST00000565003 PTPN12Q05209 780 aaKnown RBP12.57□□□□□ -0.4
CMTM3-209ENST00000565003 FBXO33Q7Z6M2 555 aa12.57□□□□□ -0.4
CMTM3-209ENST00000565003 PRMT6Q96LA8 375 aaPredicted RBP12.57□□□□□ -0.4
CMTM3-209ENST00000565003 IQSEC3Q9UPP2 1182 aaPredicted RBP12.57□□□□□ -0.4
CMTM3-209ENST00000565003 COL1A1P02452 1464 aaPredicted RBP12.57□□□□□ -0.4
CMTM3-209ENST00000565003 KIF16BQ96L93 1317 aa12.57□□□□□ -0.4
CMTM3-209ENST00000565003 SSC5DA1L4H1 1573 aa12.56□□□□□ -0.4
CMTM3-209ENST00000565003 CLRN2A0PK11 232 aa12.56□□□□□ -0.4
CMTM3-209ENST00000565003 EYA2O00167 538 aa12.56□□□□□ -0.4
CMTM3-209ENST00000565003 FGFR2P21802 821 aa12.56□□□□□ -0.4
CMTM3-209ENST00000565003 NF2P35240 595 aa12.56□□□□□ -0.4
CMTM3-209ENST00000565003 TTLL12Q14166 644 aaPredicted RBP12.56□□□□□ -0.4
CMTM3-209ENST00000565003 GRIK5Q16478 980 aa12.56□□□□□ -0.4
CMTM3-209ENST00000565003 ATG9AQ7Z3C6 839 aa12.56□□□□□ -0.4
CMTM3-209ENST00000565003 CSRNP1Q96S65 589 aa12.56□□□□□ -0.4
CMTM3-209ENST00000565003 MEIS3Q99687 375 aa12.56□□□□□ -0.4
CMTM3-209ENST00000565003 DEFB129Q9H1M3 183 aa12.56□□□□□ -0.4
CMTM3-209ENST00000565003 FZD1Q9UP38 647 aa12.56□□□□□ -0.4
CMTM3-209ENST00000565003 BCAMP50895 628 aa12.55□□□□□ -0.4
CMTM3-209ENST00000565003 RBM5P52756 815 aaKnown RBP eCLIP12.55□□□□□ -0.4
CMTM3-209ENST00000565003 PRKG1Q13976 671 aa12.55□□□□□ -0.4
CMTM3-209ENST00000565003 PUM3Q15397 648 aaKnown RBP12.55□□□□□ -0.4
CMTM3-209ENST00000565003 VPS37DQ86XT2 251 aa12.55□□□□□ -0.4
CMTM3-209ENST00000565003 ARHGAP45Q92619 1136 aa12.55□□□□□ -0.4
CMTM3-209ENST00000565003 TTF2Q9UNY4 1162 aaKnown RBP12.55□□□□□ -0.4
CMTM3-209ENST00000565003 LRRFIP2Q9Y608 721 aaKnown RBP12.55□□□□□ -0.4
CMTM3-209ENST00000565003 CASP8AP2Q9UKL3 1982 aa12.54□□□□□ -0.4
CMTM3-209ENST00000565003 MYO1BO43795 1136 aa12.54□□□□□ -0.4
CMTM3-209ENST00000565003 IFIT1P09914 478 aaKnown RBP12.54□□□□□ -0.4
CMTM3-209ENST00000565003 CHAF1AQ13111 956 aaPredicted RBP12.54□□□□□ -0.4
CMTM3-209ENST00000565003 CAVIN4Q5BKX8 364 aa12.54□□□□□ -0.4
CMTM3-209ENST00000565003 DIEXFQ68CQ4 756 aaKnown RBP12.54□□□□□ -0.4
CMTM3-209ENST00000565003 INTS3Q68E01 1043 aaKnown RBP12.54□□□□□ -0.4
CMTM3-209ENST00000565003 SIL1Q9H173 461 aa12.54□□□□□ -0.4
CMTM3-209ENST00000565003 VEZTQ9HBM0 779 aa12.54□□□□□ -0.4
CMTM3-209ENST00000565003 RNF186Q9NXI6 227 aa12.54□□□□□ -0.4
CMTM3-209ENST00000565003 SAGE1Q9NXZ1 904 aa12.54□□□□□ -0.4
CMTM3-209ENST00000565003 SERPINA10Q9UK55 444 aa12.54□□□□□ -0.4
CMTM3-209ENST00000565003 TNNQ9UQP3 1299 aa12.54□□□□□ -0.4
CMTM3-209ENST00000565003 TRPA1O75762 1119 aa12.53□□□□□ -0.4
CMTM3-209ENST00000565003 BCAR3O75815 825 aa12.53□□□□□ -0.4
CMTM3-209ENST00000565003 CIAO1O76071 339 aa12.53□□□□□ -0.4
CMTM3-209ENST00000565003 TRIM27P14373 513 aa12.53□□□□□ -0.4
CMTM3-209ENST00000565003 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
CMTM3-209ENST00000565003 ARMC9Q7Z3E5 817 aa12.53□□□□□ -0.4
CMTM3-209ENST00000565003 ABHD8Q96I13 439 aa12.53□□□□□ -0.4
CMTM3-209ENST00000565003 ANGEL1Q9UNK9 670 aaKnown RBP12.53□□□□□ -0.4
CMTM3-209ENST00000565003 PA2G4Q9UQ80 394 aaKnown RBP12.53□□□□□ -0.4
CMTM3-209ENST00000565003 PPP2R3BQ9Y5P8 575 aa12.53□□□□□ -0.4
CMTM3-209ENST00000565003 AKAP11Q9UKA4 1901 aa12.52□□□□□ -0.4
CMTM3-209ENST00000565003 FRAT2O75474 233 aaPredicted RBP12.52□□□□□ -0.41
CMTM3-209ENST00000565003 SLC5A1P13866 664 aa12.52□□□□□ -0.41
CMTM3-209ENST00000565003 CRKP46108 304 aa12.52□□□□□ -0.41
CMTM3-209ENST00000565003 HNRNPUQ00839 825 aaKnown RBP eCLIP12.52□□□□□ -0.41
CMTM3-209ENST00000565003 MKRN3Q13064 507 aaKnown RBP12.52□□□□□ -0.41
CMTM3-209ENST00000565003 RASA3Q14644 834 aa12.52□□□□□ -0.41
CMTM3-209ENST00000565003 LDLRAD1Q5T700 205 aa12.52□□□□□ -0.41
CMTM3-209ENST00000565003 NBPF12Q5TAG4 269 aaPredicted RBP12.52□□□□□ -0.41
CMTM3-209ENST00000565003 DZIP1LQ8IYY4 767 aaKnown RBP12.52□□□□□ -0.41
CMTM3-209ENST00000565003 TBC1D22AQ8WUA7 517 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms