RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	DNAJC2	Q99543	621 aa	Known RBP	11.96	□□□□□ -0.49
SIN3A-205	ENST00000564778	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.96	□□□□□ -0.49
SIN3A-205	ENST00000564778	TAOK3	Q9H2K8	898 aa		11.96	□□□□□ -0.49
SIN3A-205	ENST00000564778	CD209	Q9NNX6	404 aa		11.96	□□□□□ -0.49
SIN3A-205	ENST00000564778	MAST2	Q6P0Q8	1798 aa		11.96	□□□□□ -0.49
SIN3A-205	ENST00000564778	FAM205A	Q6ZU69	1335 aa		11.95	□□□□□ -0.5
SIN3A-205	ENST00000564778	SALL1	Q9NSC2	1324 aa		11.95	□□□□□ -0.5
SIN3A-205	ENST00000564778	COL4A5	P29400	1685 aa		11.95	□□□□□ -0.5
SIN3A-205	ENST00000564778	TRIM6-TRIM34	B2RNG4	842 aa		11.95	□□□□□ -0.5
SIN3A-205	ENST00000564778	GOLIM4	O00461	696 aa		11.95	□□□□□ -0.5
SIN3A-205	ENST00000564778	IGSF3	O75054	1194 aa		11.95	□□□□□ -0.5
SIN3A-205	ENST00000564778	CDC45	O75419	566 aa		11.95	□□□□□ -0.5
SIN3A-205	ENST00000564778	CYP2E1	P05181	493 aa	Predicted RBP	11.95	□□□□□ -0.5
SIN3A-205	ENST00000564778	ZAP70	P43403	619 aa		11.95	□□□□□ -0.5
SIN3A-205	ENST00000564778	TTF1	Q15361	905 aa	Predicted RBP	11.95	□□□□□ -0.5
SIN3A-205	ENST00000564778	C8orf34	Q49A92	452 aa		11.95	□□□□□ -0.5
SIN3A-205	ENST00000564778	KBTBD3	Q8NAB2	608 aa		11.95	□□□□□ -0.5
SIN3A-205	ENST00000564778	NDUFB9	Q9Y6M9	179 aa		11.95	□□□□□ -0.5
SIN3A-205	ENST00000564778	SCN9A	Q15858	1988 aa		11.95	□□□□□ -0.5
SIN3A-205	ENST00000564778	PPIP5K2	O43314	1243 aa		11.94	□□□□□ -0.5
SIN3A-205	ENST00000564778	MAP4K4	O95819	1239 aa	Predicted RBP	11.94	□□□□□ -0.5
SIN3A-205	ENST00000564778	PODN	Q7Z5L7	613 aa		11.94	□□□□□ -0.5
SIN3A-205	ENST00000564778	EDC3	Q96F86	508 aa	Known RBP	11.94	□□□□□ -0.5
SIN3A-205	ENST00000564778	ANTXR1	Q9H6X2	564 aa		11.94	□□□□□ -0.5
SIN3A-205	ENST00000564778	SNRK	Q9NRH2	765 aa		11.94	□□□□□ -0.5
SIN3A-205	ENST00000564778	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.93	□□□□□ -0.5
SIN3A-205	ENST00000564778	HIP1	O00291	1037 aa		11.93	□□□□□ -0.5
SIN3A-205	ENST00000564778	RIMBP2	O15034	1052 aa		11.93	□□□□□ -0.5
SIN3A-205	ENST00000564778	IARS	P41252	1262 aa	Known RBP	11.93	□□□□□ -0.5
SIN3A-205	ENST00000564778	AOC3	Q16853	763 aa		11.93	□□□□□ -0.5
SIN3A-205	ENST00000564778	TMED8	Q6PL24	325 aa	Predicted RBP	11.93	□□□□□ -0.5
SIN3A-205	ENST00000564778	TBC1D9	Q6ZT07	1266 aa		11.93	□□□□□ -0.5
SIN3A-205	ENST00000564778	WDR66	Q8TBY9	1149 aa		11.93	□□□□□ -0.5
SIN3A-205	ENST00000564778	RILPL2	Q969X0	211 aa		11.93	□□□□□ -0.5
SIN3A-205	ENST00000564778	FSD1	Q9BTV5	496 aa		11.93	□□□□□ -0.5
SIN3A-205	ENST00000564778	PIH1D3	Q9NQM4	214 aa	Known RBP	11.93	□□□□□ -0.5
SIN3A-205	ENST00000564778	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.93	□□□□□ -0.5
SIN3A-205	ENST00000564778	ECE2	O60344	883 aa		11.92	□□□□□ -0.5
SIN3A-205	ENST00000564778	CHML	P26374	656 aa		11.92	□□□□□ -0.5
SIN3A-205	ENST00000564778	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.92	□□□□□ -0.5
SIN3A-205	ENST00000564778	ARHGAP27	Q6ZUM4	889 aa		11.92	□□□□□ -0.5
SIN3A-205	ENST00000564778	ZGPAT	Q8N5A5	531 aa	Known RBP	11.92	□□□□□ -0.5
SIN3A-205	ENST00000564778	TBC1D22A	Q8WUA7	517 aa		11.92	□□□□□ -0.5
SIN3A-205	ENST00000564778	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.92	□□□□□ -0.5
SIN3A-205	ENST00000564778	DICER1	Q9UPY3	1922 aa	Known RBP	11.92	□□□□□ -0.5
SIN3A-205	ENST00000564778	RAD50	Q92878	1312 aa		11.91	□□□□□ -0.5
SIN3A-205	ENST00000564778	FRAT2	O75474	233 aa	Predicted RBP	11.91	□□□□□ -0.5
SIN3A-205	ENST00000564778	ZFY	P08048	801 aa	Predicted RBP	11.91	□□□□□ -0.5
SIN3A-205	ENST00000564778	FKBP1A	P62942	108 aa	Known RBP	11.91	□□□□□ -0.5
SIN3A-205	ENST00000564778	DOK7	Q18PE1	504 aa		11.91	□□□□□ -0.5
SIN3A-205	ENST00000564778	CASC1	Q6TDU7	716 aa		11.91	□□□□□ -0.5
SIN3A-205	ENST00000564778	LARGE2	Q8N3Y3	721 aa		11.91	□□□□□ -0.5
SIN3A-205	ENST00000564778	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
SIN3A-205	ENST00000564778	DBNDD1	Q9H9R9	158 aa		11.91	□□□□□ -0.5
SIN3A-205	ENST00000564778	SUGT1	Q9Y2Z0	365 aa		11.91	□□□□□ -0.5
SIN3A-205	ENST00000564778	CCDC88A	Q3V6T2	1871 aa		11.91	□□□□□ -0.5
SIN3A-205	ENST00000564778	YDJC	A8MPS7	323 aa		11.9	□□□□□ -0.5
SIN3A-205	ENST00000564778	SBF1	O95248	1867 aa		11.9	□□□□□ -0.5
SIN3A-205	ENST00000564778	ADD2	P35612	726 aa		11.9	□□□□□ -0.5
SIN3A-205	ENST00000564778	RASSF7	Q02833	373 aa		11.9	□□□□□ -0.5
SIN3A-205	ENST00000564778	MAP3K12	Q12852	859 aa		11.9	□□□□□ -0.5
SIN3A-205	ENST00000564778	CHAF1A	Q13111	956 aa	Predicted RBP	11.9	□□□□□ -0.5
SIN3A-205	ENST00000564778	UBE3C	Q15386	1083 aa		11.9	□□□□□ -0.5
SIN3A-205	ENST00000564778	STRIP1	Q5VSL9	837 aa		11.9	□□□□□ -0.5
SIN3A-205	ENST00000564778	ZSCAN25	Q6NSZ9	544 aa		11.9	□□□□□ -0.5
SIN3A-205	ENST00000564778	BACH2	Q9BYV9	841 aa		11.9	□□□□□ -0.5
SIN3A-205	ENST00000564778	DIAPH3	Q9NSV4	1193 aa		11.9	□□□□□ -0.5
SIN3A-205	ENST00000564778	TCRBV5S4A2T	A0A5A2	114 aa		11.89	□□□□□ -0.51
SIN3A-205	ENST00000564778	RNF113A	O15541	343 aa	Known RBP	11.89	□□□□□ -0.51
SIN3A-205	ENST00000564778	EIF5B	O60841	1220 aa	Known RBP	11.89	□□□□□ -0.51
SIN3A-205	ENST00000564778	IDH1	O75874	414 aa	Known RBP	11.89	□□□□□ -0.51
SIN3A-205	ENST00000564778	PDE6A	P16499	860 aa		11.89	□□□□□ -0.51
SIN3A-205	ENST00000564778	PRELP	P51888	382 aa		11.89	□□□□□ -0.51
SIN3A-205	ENST00000564778	MFSD14B	Q5SR56	506 aa		11.89	□□□□□ -0.51
SIN3A-205	ENST00000564778	ZMYM1	Q5SVZ6	1142 aa		11.89	□□□□□ -0.51
SIN3A-205	ENST00000564778	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.89	□□□□□ -0.51
SIN3A-205	ENST00000564778	NIM1K	Q8IY84	436 aa		11.89	□□□□□ -0.51
SIN3A-205	ENST00000564778	ZNRF3	Q9ULT6	936 aa		11.89	□□□□□ -0.51
SIN3A-205	ENST00000564778		A0A0D9SFI3	127 aa		11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	USP17L3	A6NCW0	530 aa		11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	USP17L4	A6NCW7	530 aa		11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778		G3V3G9	751 aa		11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	SGSM2	O43147	1006 aa		11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	LMNB1	P20700	586 aa		11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	PRDX5	P30044	214 aa		11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	GTF2I	P78347	998 aa		11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	NMI	Q13287	307 aa	Predicted RBP	11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	DACT2	Q5SW24	774 aa		11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	DCAF8	Q5TAQ9	597 aa		11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	TTLL5	Q6EMB2	1281 aa		11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	ERICH6	Q7L0X2	663 aa		11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	USP17L1	Q7RTZ2	530 aa		11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	CERS5	Q8N5B7	392 aa		11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	APPBP2	Q92624	585 aa		11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	NSUN4	Q96CB9	384 aa	Known RBP	11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	ESYT1	Q9BSJ8	1104 aa		11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	HELLS	Q9NRZ9	838 aa		11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	LRP2BP	Q9P2M1	347 aa		11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	ABCF2	Q9UG63	623 aa		11.88	□□□□□ -0.51
SIN3A-205	ENST00000564778	JAG2	Q9Y219	1238 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 72 ms