RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 SCN4AP35499 1836 aa19.66■□□□□ 0.74
RAB40C-208ENST00000564703 MMP14P50281 582 aa19.65■□□□□ 0.74
RAB40C-208ENST00000564703 CCDC158Q5M9N0 1113 aa19.65■□□□□ 0.74
RAB40C-208ENST00000564703 CCDC102BQ68D86 513 aa19.65■□□□□ 0.74
RAB40C-208ENST00000564703 USP50Q70EL3 339 aaPredicted RBP19.65■□□□□ 0.74
RAB40C-208ENST00000564703 CLASRPQ8N2M8 674 aaKnown RBP19.65■□□□□ 0.74
RAB40C-208ENST00000564703 RHPN1Q8TCX5 695 aa19.65■□□□□ 0.74
RAB40C-208ENST00000564703 TBC1D22AQ8WUA7 517 aa19.65■□□□□ 0.74
RAB40C-208ENST00000564703 BCL11AQ9H165 835 aa19.65■□□□□ 0.74
RAB40C-208ENST00000564703 SCN9AQ15858 1988 aa19.64■□□□□ 0.74
RAB40C-208ENST00000564703 ADORA1P30542 326 aa19.64■□□□□ 0.73
RAB40C-208ENST00000564703 FKBP1AP62942 108 aaKnown RBP19.64■□□□□ 0.73
RAB40C-208ENST00000564703 IRX6P78412 446 aaPredicted RBP19.64■□□□□ 0.73
RAB40C-208ENST00000564703 RBM26Q5T8P6 1007 aaKnown RBP19.64■□□□□ 0.73
RAB40C-208ENST00000564703 DENND2AQ9ULE3 1009 aa19.64■□□□□ 0.73
RAB40C-208ENST00000564703 JAG2Q9Y219 1238 aa19.64■□□□□ 0.73
RAB40C-208ENST00000564703 FAM205AQ6ZU69 1335 aa19.64■□□□□ 0.73
RAB40C-208ENST00000564703 SEMA3EO15041 775 aa19.63■□□□□ 0.73
RAB40C-208ENST00000564703 PHKA1P46020 1223 aa19.63■□□□□ 0.73
RAB40C-208ENST00000564703 MFSD14BQ5SR56 506 aa19.63■□□□□ 0.73
RAB40C-208ENST00000564703 RBM46Q8TBY0 533 aaKnown RBP19.63■□□□□ 0.73
RAB40C-208ENST00000564703 WDR66Q8TBY9 1149 aa19.63■□□□□ 0.73
RAB40C-208ENST00000564703 GMLQ99445 158 aa19.63■□□□□ 0.73
RAB40C-208ENST00000564703 MXD3Q9BW11 206 aa19.63■□□□□ 0.73
RAB40C-208ENST00000564703 DCTPP1Q9H773 170 aa19.63■□□□□ 0.73
RAB40C-208ENST00000564703 ZBTB47Q9UFB7 747 aaPredicted RBP19.63■□□□□ 0.73
RAB40C-208ENST00000564703 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.63■□□□□ 0.73
RAB40C-208ENST00000564703 UQCRFS1P1P0C7P4 283 aa19.62■□□□□ 0.73
RAB40C-208ENST00000564703 AACSQ86V21 672 aa19.62■□□□□ 0.73
RAB40C-208ENST00000564703 KIAA0825Q8IV33 1275 aa19.62■□□□□ 0.73
RAB40C-208ENST00000564703 SMC1BQ8NDV3 1235 aa19.62■□□□□ 0.73
RAB40C-208ENST00000564703 LRRCC1Q9C099 1032 aa19.62■□□□□ 0.73
RAB40C-208ENST00000564703 CCDC8Q9H0W5 538 aaPredicted RBP19.62■□□□□ 0.73
RAB40C-208ENST00000564703 RWDD1Q9H446 243 aaPredicted RBP19.62■□□□□ 0.73
RAB40C-208ENST00000564703 IL1RAPL2Q9NP60 686 aa19.62■□□□□ 0.73
RAB40C-208ENST00000564703 IFIT2P09913 472 aaKnown RBP19.61■□□□□ 0.73
RAB40C-208ENST00000564703 TTC39AQ5SRH9 613 aa19.61■□□□□ 0.73
RAB40C-208ENST00000564703 SAMD7Q7Z3H4 446 aa19.61■□□□□ 0.73
RAB40C-208ENST00000564703 LDHDQ86WU2 507 aa19.61■□□□□ 0.73
RAB40C-208ENST00000564703 EAF2Q96CJ1 260 aaPredicted RBP19.61■□□□□ 0.73
RAB40C-208ENST00000564703 F8W031 263 aaPredicted RBP19.6■□□□□ 0.73
RAB40C-208ENST00000564703 TBC1D10BQ4KMP7 808 aaPredicted RBP19.6■□□□□ 0.73
RAB40C-208ENST00000564703 CHADLQ6NUI6 762 aa19.6■□□□□ 0.73
RAB40C-208ENST00000564703 DBNDD2Q9BQY9 259 aa19.6■□□□□ 0.73
RAB40C-208ENST00000564703 SHTN1A0MZ66 631 aa19.59■□□□□ 0.73
RAB40C-208ENST00000564703 ZNF280AP59817 542 aaPredicted RBP19.59■□□□□ 0.73
RAB40C-208ENST00000564703 MYOZ2Q9NPC6 264 aa19.59■□□□□ 0.73
RAB40C-208ENST00000564703 PSME4Q14997 1843 aa19.59■□□□□ 0.73
RAB40C-208ENST00000564703 ZNF609O15014 1411 aa19.59■□□□□ 0.73
RAB40C-208ENST00000564703 RBM5P52756 815 aaKnown RBP eCLIP19.58■□□□□ 0.72
RAB40C-208ENST00000564703 FSTL1Q12841 308 aa19.58■□□□□ 0.72
RAB40C-208ENST00000564703 HDAC1Q13547 482 aaPredicted RBP19.58■□□□□ 0.72
RAB40C-208ENST00000564703 KIF4BQ2VIQ3 1234 aa19.58■□□□□ 0.72
RAB40C-208ENST00000564703 ZGPATQ8N5A5 531 aaKnown RBP19.58■□□□□ 0.72
RAB40C-208ENST00000564703 CERS5Q8N5B7 392 aa19.58■□□□□ 0.72
RAB40C-208ENST00000564703 ZC3H15Q8WU90 426 aaKnown RBP19.58■□□□□ 0.72
RAB40C-208ENST00000564703 TTF2Q9UNY4 1162 aaKnown RBP19.58■□□□□ 0.72
RAB40C-208ENST00000564703 DLGAP5Q15398 846 aa19.57■□□□□ 0.72
RAB40C-208ENST00000564703 SPTY2D1Q68D10 685 aaPredicted RBP19.57■□□□□ 0.72
RAB40C-208ENST00000564703 GCC1Q96CN9 775 aa19.57■□□□□ 0.72
RAB40C-208ENST00000564703 SUGT1Q9Y2Z0 365 aa19.57■□□□□ 0.72
RAB40C-208ENST00000564703 ZBTB22O15209 634 aa19.56■□□□□ 0.72
RAB40C-208ENST00000564703 POTEIP0CG38 1075 aa19.56■□□□□ 0.72
RAB40C-208ENST00000564703 POTEJP0CG39 1038 aa19.56■□□□□ 0.72
RAB40C-208ENST00000564703 C1QTNF8P60827 252 aa19.56■□□□□ 0.72
RAB40C-208ENST00000564703 RASGRF1Q13972 1273 aa19.56■□□□□ 0.72
RAB40C-208ENST00000564703 SPATA5Q8NB90 893 aa19.56■□□□□ 0.72
RAB40C-208ENST00000564703 DCPSQ96C86 337 aaKnown RBP19.56■□□□□ 0.72
RAB40C-208ENST00000564703 DBNLQ9UJU6 430 aaKnown RBP19.56■□□□□ 0.72
RAB40C-208ENST00000564703 MAST3O60307 1309 aa19.55■□□□□ 0.72
RAB40C-208ENST00000564703 LDHBP07195 334 aaKnown RBP19.55■□□□□ 0.72
RAB40C-208ENST00000564703 ARID4AP29374 1257 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-208ENST00000564703 HIRAP54198 1017 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-208ENST00000564703 SCARF1Q14162 830 aa19.55■□□□□ 0.72
RAB40C-208ENST00000564703 TRPM4Q8TD43 1214 aa19.55■□□□□ 0.72
RAB40C-208ENST00000564703 ABCF2Q9UG63 623 aa19.55■□□□□ 0.72
RAB40C-208ENST00000564703 PDS5AQ29RF7 1337 aaKnown RBP19.54■□□□□ 0.72
RAB40C-208ENST00000564703 MYO1BO43795 1136 aa19.54■□□□□ 0.72
RAB40C-208ENST00000564703 SMARCA5O60264 1052 aaPredicted RBP19.54■□□□□ 0.72
RAB40C-208ENST00000564703 NEFLP07196 543 aa19.54■□□□□ 0.72
RAB40C-208ENST00000564703 MAP1SQ66K74 1059 aaPredicted RBP19.54■□□□□ 0.72
RAB40C-208ENST00000564703 CNTROBQ8N137 903 aa19.54■□□□□ 0.72
RAB40C-208ENST00000564703 ZNF512BQ96KM6 892 aaPredicted RBP19.54■□□□□ 0.72
RAB40C-208ENST00000564703 HMG20BQ9P0W2 317 aa19.54■□□□□ 0.72
RAB40C-208ENST00000564703 EGFRP00533 1210 aa19.53■□□□□ 0.72
RAB40C-208ENST00000564703 HDLBPQ00341 1268 aaKnown RBP19.53■□□□□ 0.72
RAB40C-208ENST00000564703 CFAP100Q494V2 611 aa19.53■□□□□ 0.72
RAB40C-208ENST00000564703 ANKRD45Q5TZF3 282 aa19.53■□□□□ 0.72
RAB40C-208ENST00000564703 MRIQ9BWK5 157 aa19.53■□□□□ 0.72
RAB40C-208ENST00000564703 TLR7Q9NYK1 1049 aaKnown RBP19.53■□□□□ 0.72
RAB40C-208ENST00000564703 PGAP2Q9UHJ9 254 aa19.53■□□□□ 0.72
RAB40C-208ENST00000564703 SERPINA10Q9UK55 444 aa19.53■□□□□ 0.72
RAB40C-208ENST00000564703 MYH13Q9UKX3 1938 aa19.53■□□□□ 0.72
RAB40C-208ENST00000564703 SALL1Q9NSC2 1324 aa19.52■□□□□ 0.72
RAB40C-208ENST00000564703 ARAP2Q8WZ64 1704 aa19.52■□□□□ 0.72
RAB40C-208ENST00000564703 MCAMP43121 646 aa19.52■□□□□ 0.72
RAB40C-208ENST00000564703 ERICH6Q7L0X2 663 aa19.52■□□□□ 0.72
RAB40C-208ENST00000564703 CDC37L1Q7L3B6 337 aa19.52■□□□□ 0.72
RAB40C-208ENST00000564703 SLF2Q8IX21 1173 aa19.52■□□□□ 0.72
RAB40C-208ENST00000564703 TEKT1Q969V4 418 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms