RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 SNAP23O00161 211 aa15.33■□□□□ 0.04
GTF3C1-204ENST00000564664 HIBADHP31937 336 aaKnown RBP15.33■□□□□ 0.04
GTF3C1-204ENST00000564664 ARMC9Q7Z3E5 817 aa15.33■□□□□ 0.04
GTF3C1-204ENST00000564664 RASAL3Q86YV0 1011 aa15.33■□□□□ 0.04
GTF3C1-204ENST00000564664 TRMT2AQ8IZ69 625 aaKnown RBP15.33■□□□□ 0.04
GTF3C1-204ENST00000564664 TDRD7Q8NHU6 1098 aaKnown RBP15.33■□□□□ 0.04
GTF3C1-204ENST00000564664 SSH1Q8WYL5 1049 aa15.33■□□□□ 0.04
GTF3C1-204ENST00000564664 TSKSQ9UJT2 592 aa15.33■□□□□ 0.04
GTF3C1-204ENST00000564664 FAM205AQ6ZU69 1335 aa15.33■□□□□ 0.04
GTF3C1-204ENST00000564664 PAPPA2Q9BXP8 1791 aa15.32■□□□□ 0.04
GTF3C1-204ENST00000564664 UNCXA6NJT0 531 aa15.32■□□□□ 0.04
GTF3C1-204ENST00000564664 UBE2Q2LH0YL09 131 aa15.32■□□□□ 0.04
GTF3C1-204ENST00000564664 CCER2I3L3R5 266 aa15.32■□□□□ 0.04
GTF3C1-204ENST00000564664 TTLL12Q14166 644 aaPredicted RBP15.32■□□□□ 0.04
GTF3C1-204ENST00000564664 CERS5Q8N5B7 392 aa15.32■□□□□ 0.04
GTF3C1-204ENST00000564664 RNF186Q9NXI6 227 aa15.32■□□□□ 0.04
GTF3C1-204ENST00000564664 HDAC5Q9UQL6 1122 aa15.32■□□□□ 0.04
GTF3C1-204ENST00000564664 COL1A1P02452 1464 aaPredicted RBP15.32■□□□□ 0.04
GTF3C1-204ENST00000564664 PRAMEF18Q5VWM3 479 aa15.31■□□□□ 0.04
GTF3C1-204ENST00000564664 FAM84BQ96KN1 310 aaPredicted RBP15.31■□□□□ 0.04
GTF3C1-204ENST00000564664 USP44Q9H0E7 712 aa15.31■□□□□ 0.04
GTF3C1-204ENST00000564664 DEFB129Q9H1M3 183 aa15.31■□□□□ 0.04
GTF3C1-204ENST00000564664 BICC1Q9H694 974 aaKnown RBP15.31■□□□□ 0.04
GTF3C1-204ENST00000564664 ZNF646O15015 1829 aaPredicted RBP15.31■□□□□ 0.04
GTF3C1-204ENST00000564664 SPDYE2BA6NHP3 402 aa15.3■□□□□ 0.04
GTF3C1-204ENST00000564664 TRPA1O75762 1119 aa15.3■□□□□ 0.04
GTF3C1-204ENST00000564664 SPDYE6P0CI01 402 aa15.3■□□□□ 0.04
GTF3C1-204ENST00000564664 TM4SF4P48230 202 aa15.3■□□□□ 0.04
GTF3C1-204ENST00000564664 SUPT20HL1Q3ZLR7 823 aa15.3■□□□□ 0.04
GTF3C1-204ENST00000564664 CFAP100Q494V2 611 aa15.3■□□□□ 0.04
GTF3C1-204ENST00000564664 CAVIN4Q5BKX8 364 aa15.3■□□□□ 0.04
GTF3C1-204ENST00000564664 PUS3Q9BZE2 481 aaKnown RBP15.3■□□□□ 0.04
GTF3C1-204ENST00000564664 SERPINA10Q9UK55 444 aa15.3■□□□□ 0.04
GTF3C1-204ENST00000564664 PPP1R12BO60237 982 aaPredicted RBP15.29■□□□□ 0.04
GTF3C1-204ENST00000564664 PDE8BO95263 885 aa15.29■□□□□ 0.04
GTF3C1-204ENST00000564664 MAP3K11Q16584 847 aa15.29■□□□□ 0.04
GTF3C1-204ENST00000564664 LDLRAD1Q5T700 205 aa15.29■□□□□ 0.04
GTF3C1-204ENST00000564664 FBXO33Q7Z6M2 555 aa15.29■□□□□ 0.04
GTF3C1-204ENST00000564664 VPS37DQ86XT2 251 aa15.29■□□□□ 0.04
GTF3C1-204ENST00000564664 ANKRD44Q8N8A2 993 aa15.29■□□□□ 0.04
GTF3C1-204ENST00000564664 SCAF8Q9UPN6 1271 aaKnown RBP15.29■□□□□ 0.04
GTF3C1-204ENST00000564664 CASP8AP2Q9UKL3 1982 aa15.29■□□□□ 0.04
GTF3C1-204ENST00000564664 AKAP11Q9UKA4 1901 aa15.29■□□□□ 0.04
GTF3C1-204ENST00000564664 GYG1P46976 350 aa15.28■□□□□ 0.04
GTF3C1-204ENST00000564664 INHBEP58166 350 aa15.28■□□□□ 0.04
GTF3C1-204ENST00000564664 METTL24Q5JXM2 366 aa15.28■□□□□ 0.04
GTF3C1-204ENST00000564664 MFSD14BQ5SR56 506 aa15.28■□□□□ 0.04
GTF3C1-204ENST00000564664 MOB2Q70IA6 237 aa15.28■□□□□ 0.04
GTF3C1-204ENST00000564664 TBC1D22AQ8WUA7 517 aa15.28■□□□□ 0.04
GTF3C1-204ENST00000564664 PRMT6Q96LA8 375 aaPredicted RBP15.28■□□□□ 0.04
GTF3C1-204ENST00000564664 MRIQ9BWK5 157 aa15.28■□□□□ 0.04
GTF3C1-204ENST00000564664 MCOLN1Q9GZU1 580 aa15.28■□□□□ 0.04
GTF3C1-204ENST00000564664 KIF16BQ96L93 1317 aa15.27■□□□□ 0.04
GTF3C1-204ENST00000564664 F8W031 263 aaPredicted RBP15.27■□□□□ 0.04
GTF3C1-204ENST00000564664 HDLBPQ00341 1268 aaKnown RBP15.27■□□□□ 0.04
GTF3C1-204ENST00000564664 PTPN12Q05209 780 aaKnown RBP15.27■□□□□ 0.04
GTF3C1-204ENST00000564664 SREBF2Q12772 1141 aa15.27■□□□□ 0.04
GTF3C1-204ENST00000564664 DGKZQ13574 1117 aa15.27■□□□□ 0.04
GTF3C1-204ENST00000564664 TNFAIP1Q13829 316 aa15.27■□□□□ 0.04
GTF3C1-204ENST00000564664 NOM1Q5C9Z4 860 aaKnown RBP15.27■□□□□ 0.04
GTF3C1-204ENST00000564664 CDCA7LQ96GN5 454 aa15.27■□□□□ 0.04
GTF3C1-204ENST00000564664 SMC4Q9NTJ3 1288 aa15.27■□□□□ 0.04
GTF3C1-204ENST00000564664 FBXO3Q9UK99 471 aa15.27■□□□□ 0.04
GTF3C1-204ENST00000564664 CCDC85CA6NKD9 419 aa15.26■□□□□ 0.03
GTF3C1-204ENST00000564664 RGS19P49795 217 aa15.26■□□□□ 0.03
GTF3C1-204ENST00000564664 RBM5P52756 815 aaKnown RBP eCLIP15.26■□□□□ 0.03
GTF3C1-204ENST00000564664 LRRC24Q50LG9 513 aa15.26■□□□□ 0.03
GTF3C1-204ENST00000564664 VGLL2Q8N8G2 317 aa15.26■□□□□ 0.03
GTF3C1-204ENST00000564664 SLC10A4Q96EP9 437 aa15.26■□□□□ 0.03
GTF3C1-204ENST00000564664 API5Q9BZZ5 524 aaKnown RBP15.26■□□□□ 0.03
GTF3C1-204ENST00000564664 ANGEL1Q9UNK9 670 aaKnown RBP15.26■□□□□ 0.03
GTF3C1-204ENST00000564664 TTF2Q9UNY4 1162 aaKnown RBP15.26■□□□□ 0.03
GTF3C1-204ENST00000564664 SUGT1Q9Y2Z0 365 aa15.26■□□□□ 0.03
GTF3C1-204ENST00000564664 A0A1B0GUL6 1792 aa15.26■□□□□ 0.03
GTF3C1-204ENST00000564664 FRAT2O75474 233 aaPredicted RBP15.25■□□□□ 0.03
GTF3C1-204ENST00000564664 ALDH1A1P00352 501 aa15.25■□□□□ 0.03
GTF3C1-204ENST00000564664 IFIT1P09914 478 aaKnown RBP15.25■□□□□ 0.03
GTF3C1-204ENST00000564664 ARHGAP45Q92619 1136 aa15.25■□□□□ 0.03
GTF3C1-204ENST00000564664 CFHR5Q9BXR6 569 aa15.25■□□□□ 0.03
GTF3C1-204ENST00000564664 EYA2O00167 538 aa15.24■□□□□ 0.03
GTF3C1-204ENST00000564664 ZBTB48P10074 688 aaPredicted RBP15.24■□□□□ 0.03
GTF3C1-204ENST00000564664 IREB2P48200 963 aaKnown RBP15.24■□□□□ 0.03
GTF3C1-204ENST00000564664 PUM3Q15397 648 aaKnown RBP15.24■□□□□ 0.03
GTF3C1-204ENST00000564664 PKN2Q16513 984 aaKnown RBP15.24■□□□□ 0.03
GTF3C1-204ENST00000564664 SPDYE2Q495Y8 402 aa15.24■□□□□ 0.03
GTF3C1-204ENST00000564664 SPRYD7Q5W111 196 aa15.24■□□□□ 0.03
GTF3C1-204ENST00000564664 DZIP1LQ8IYY4 767 aaKnown RBP15.24■□□□□ 0.03
GTF3C1-204ENST00000564664 VEZTQ9HBM0 779 aa15.24■□□□□ 0.03
GTF3C1-204ENST00000564664 NOB1Q9ULX3 412 aaKnown RBP15.24■□□□□ 0.03
GTF3C1-204ENST00000564664 JAG2Q9Y219 1238 aa15.24■□□□□ 0.03
GTF3C1-204ENST00000564664 CLRN2A0PK11 232 aa15.23■□□□□ 0.03
GTF3C1-204ENST00000564664 MANSC4A6NHS7 340 aaPredicted RBP15.23■□□□□ 0.03
GTF3C1-204ENST00000564664 UBTFL1P0CB47 393 aaPredicted RBP15.23■□□□□ 0.03
GTF3C1-204ENST00000564664 FGFR2P21802 821 aa15.23■□□□□ 0.03
GTF3C1-204ENST00000564664 CRKP46108 304 aa15.23■□□□□ 0.03
GTF3C1-204ENST00000564664 RFX5P48382 616 aaPredicted RBP15.23■□□□□ 0.03
GTF3C1-204ENST00000564664 TNNI2P48788 182 aa15.23■□□□□ 0.03
GTF3C1-204ENST00000564664 PRKG1Q13976 671 aa15.23■□□□□ 0.03
GTF3C1-204ENST00000564664 RASA3Q14644 834 aa15.23■□□□□ 0.03
GTF3C1-204ENST00000564664 LPIN2Q92539 896 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms