RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, human

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYLD-208	ENST00000564634	KCNJ4	P48050	445 aa		31.84	■■■□□ 2.69
CYLD-208	ENST00000564634	ANKRD2	Q9GZV1	360 aa		31.84	■■■□□ 2.69
CYLD-208	ENST00000564634	ALDH1L1	O75891	902 aa		31.83	■■■□□ 2.69
CYLD-208	ENST00000564634	CASP7	P55210	303 aa		31.83	■■■□□ 2.69
CYLD-208	ENST00000564634	PLA2G12B	Q9BX93	195 aa		31.83	■■■□□ 2.69
CYLD-208	ENST00000564634	R3HDML	Q9H3Y0	253 aa		31.83	■■■□□ 2.69
CYLD-208	ENST00000564634	ANGEL1	Q9UNK9	670 aa	Known RBP	31.83	■■■□□ 2.69
CYLD-208	ENST00000564634	ZBED9	Q6R2W3	1325 aa		31.82	■■■□□ 2.68
CYLD-208	ENST00000564634	SRCIN1	Q9C0H9	1055 aa		31.82	■■■□□ 2.68
CYLD-208	ENST00000564634	CHRND	Q07001	517 aa		31.81	■■■□□ 2.68
CYLD-208	ENST00000564634	PRPF38B	Q5VTL8	546 aa	Known RBP	31.81	■■■□□ 2.68
CYLD-208	ENST00000564634	ZBED3	Q96IU2	234 aa	Predicted RBP	31.81	■■■□□ 2.68
CYLD-208	ENST00000564634	SNAP23	O00161	211 aa		31.8	■■■□□ 2.68
CYLD-208	ENST00000564634	FBXO46	Q6PJ61	603 aa	Predicted RBP	31.8	■■■□□ 2.68
CYLD-208	ENST00000564634	FKTN	O75072	461 aa		31.79	■■■□□ 2.68
CYLD-208	ENST00000564634	MMP14	P50281	582 aa		31.79	■■■□□ 2.68
CYLD-208	ENST00000564634	RARS	P54136	660 aa	Known RBP	31.79	■■■□□ 2.68
CYLD-208	ENST00000564634	NOM1	Q5C9Z4	860 aa	Known RBP	31.79	■■■□□ 2.68
CYLD-208	ENST00000564634	SPRYD7	Q5W111	196 aa		31.79	■■■□□ 2.68
CYLD-208	ENST00000564634	CD209	Q9NNX6	404 aa		31.79	■■■□□ 2.68
CYLD-208	ENST00000564634		A0A1B0GUL6	1792 aa		31.79	■■■□□ 2.68
CYLD-208	ENST00000564634	COL1A1	P02452	1464 aa	Predicted RBP	31.78	■■■□□ 2.68
CYLD-208	ENST00000564634	LDLRAD1	Q5T700	205 aa		31.78	■■■□□ 2.68
CYLD-208	ENST00000564634	PCDHAC2	Q9Y5I4	1007 aa		31.78	■■■□□ 2.68
CYLD-208	ENST00000564634	SSC5D	A1L4H1	1573 aa		31.77	■■■□□ 2.68
CYLD-208	ENST00000564634	GRM8	O00222	908 aa		31.77	■■■□□ 2.68
CYLD-208	ENST00000564634	DLGAP5	Q15398	846 aa		31.77	■■■□□ 2.68
CYLD-208	ENST00000564634	CERS5	Q8N5B7	392 aa		31.77	■■■□□ 2.68
CYLD-208	ENST00000564634	DEFB129	Q9H1M3	183 aa		31.77	■■■□□ 2.68
CYLD-208	ENST00000564634	C9orf78	Q9NZ63	289 aa	Predicted RBP	31.77	■■■□□ 2.68
CYLD-208	ENST00000564634	PCDH10	Q9P2E7	1040 aa		31.77	■■■□□ 2.68
CYLD-208	ENST00000564634	CSF1R	P07333	972 aa		31.76	■■■□□ 2.67
CYLD-208	ENST00000564634	HTT	P42858	3142 aa		31.75	■■■□□ 2.67
CYLD-208	ENST00000564634		F8W031	263 aa	Predicted RBP	31.75	■■■□□ 2.67
CYLD-208	ENST00000564634	TAF5L	O75529	589 aa		31.75	■■■□□ 2.67
CYLD-208	ENST00000564634	HELB	Q8NG08	1087 aa	Predicted RBP	31.75	■■■□□ 2.67
CYLD-208	ENST00000564634	CFHR5	Q9BXR6	569 aa		31.75	■■■□□ 2.67
CYLD-208	ENST00000564634	ECM29	Q5VYK3	1845 aa		31.75	■■■□□ 2.67
CYLD-208	ENST00000564634	ANKRD18B	A2A2Z9	1011 aa		31.74	■■■□□ 2.67
CYLD-208	ENST00000564634	CLMN	Q96JQ2	1002 aa		31.74	■■■□□ 2.67
CYLD-208	ENST00000564634	NOB1	Q9ULX3	412 aa	Known RBP	31.74	■■■□□ 2.67
CYLD-208	ENST00000564634	IRS2	Q9Y4H2	1338 aa		31.74	■■■□□ 2.67
CYLD-208	ENST00000564634	CLRN2	A0PK11	232 aa		31.73	■■■□□ 2.67
CYLD-208	ENST00000564634	JAG2	Q9Y219	1238 aa		31.73	■■■□□ 2.67
CYLD-208	ENST00000564634	CHMP3	Q9Y3E7	222 aa		31.73	■■■□□ 2.67
CYLD-208	ENST00000564634	SLC10A4	Q96EP9	437 aa		31.72	■■■□□ 2.67
CYLD-208	ENST00000564634	WNK4	Q96J92	1243 aa		31.71	■■■□□ 2.67
CYLD-208	ENST00000564634	MANSC4	A6NHS7	340 aa	Predicted RBP	31.7	■■■□□ 2.67
CYLD-208	ENST00000564634	ALDH1A1	P00352	501 aa		31.7	■■■□□ 2.67
CYLD-208	ENST00000564634	FOXO4	P98177	505 aa		31.7	■■■□□ 2.67
CYLD-208	ENST00000564634	CFAP100	Q494V2	611 aa		31.7	■■■□□ 2.67
CYLD-208	ENST00000564634	IFNL1	Q8IU54	200 aa		31.7	■■■□□ 2.67
CYLD-208	ENST00000564634	API5	Q9BZZ5	524 aa	Known RBP	31.7	■■■□□ 2.67
CYLD-208	ENST00000564634	VEZT	Q9HBM0	779 aa		31.7	■■■□□ 2.67
CYLD-208	ENST00000564634	AOX1	Q06278	1338 aa		31.7	■■■□□ 2.66
CYLD-208	ENST00000564634	KIF16B	Q96L93	1317 aa		31.7	■■■□□ 2.66
CYLD-208	ENST00000564634	MTMR14	Q8NCE2	650 aa		31.69	■■■□□ 2.66
CYLD-208	ENST00000564634	UTY	O14607	1347 aa		31.69	■■■□□ 2.66
CYLD-208	ENST00000564634	PPP1R12B	O60237	982 aa	Predicted RBP	31.68	■■■□□ 2.66
CYLD-208	ENST00000564634	IFIT5	Q13325	482 aa	Known RBP	31.68	■■■□□ 2.66
CYLD-208	ENST00000564634	MAP3K11	Q16584	847 aa		31.68	■■■□□ 2.66
CYLD-208	ENST00000564634	ZNF804A	Q7Z570	1209 aa		31.68	■■■□□ 2.66
CYLD-208	ENST00000564634	ARHGAP45	Q92619	1136 aa		31.68	■■■□□ 2.66
CYLD-208	ENST00000564634	TRIM17	Q9Y577	477 aa		31.68	■■■□□ 2.66
CYLD-208	ENST00000564634	SPDYE2B	A6NHP3	402 aa		31.67	■■■□□ 2.66
CYLD-208	ENST00000564634	IGF2BP3	O00425	579 aa	Known RBP eCLIP	31.67	■■■□□ 2.66
CYLD-208	ENST00000564634	SPDYE6	P0CI01	402 aa		31.67	■■■□□ 2.66
CYLD-208	ENST00000564634	C15orf52	Q6ZUT6	534 aa	Known RBP	31.67	■■■□□ 2.66
CYLD-208	ENST00000564634	PPP2R3B	Q9Y5P8	575 aa		31.67	■■■□□ 2.66
CYLD-208	ENST00000564634	LAMB1	P07942	1786 aa		31.66	■■■□□ 2.66
CYLD-208	ENST00000564634	MYO1B	O43795	1136 aa		31.66	■■■□□ 2.66
CYLD-208	ENST00000564634	NBPF7	P0C2Y1	421 aa	Predicted RBP	31.65	■■■□□ 2.66
CYLD-208	ENST00000564634	ZBTB48	P10074	688 aa	Predicted RBP	31.65	■■■□□ 2.66
CYLD-208	ENST00000564634	IL1R1	P14778	569 aa		31.65	■■■□□ 2.66
CYLD-208	ENST00000564634	NBPF12	Q5TAG4	269 aa	Predicted RBP	31.65	■■■□□ 2.66
CYLD-208	ENST00000564634	PRMT6	Q96LA8	375 aa	Predicted RBP	31.65	■■■□□ 2.66
CYLD-208	ENST00000564634	IPO8	O15397	1037 aa	Known RBP	31.64	■■■□□ 2.66
CYLD-208	ENST00000564634	PLIN1	O60240	522 aa		31.64	■■■□□ 2.66
CYLD-208	ENST00000564634	RBM5	P52756	815 aa	Known RBP eCLIP	31.64	■■■□□ 2.66
CYLD-208	ENST00000564634	EPHA10	Q5JZY3	1008 aa		31.64	■■■□□ 2.66
CYLD-208	ENST00000564634	LMBR1L	Q6UX01	489 aa		31.64	■■■□□ 2.66
CYLD-208	ENST00000564634	CENPF	P49454	3210 aa		31.63	■■■□□ 2.65
CYLD-208	ENST00000564634	MKI67	P46013	3256 aa	Known RBP	31.63	■■■□□ 2.65
CYLD-208	ENST00000564634	INHBE	P58166	350 aa		31.63	■■■□□ 2.65
CYLD-208	ENST00000564634	OTOP1	Q7RTM1	612 aa		31.63	■■■□□ 2.65
CYLD-208	ENST00000564634	SUCLG2	Q96I99	432 aa		31.63	■■■□□ 2.65
CYLD-208	ENST00000564634	ZNF594	Q96JF6	807 aa	Predicted RBP	31.63	■■■□□ 2.65
CYLD-208	ENST00000564634	BCAR3	O75815	825 aa		31.62	■■■□□ 2.65
CYLD-208	ENST00000564634	GJA5	P36382	358 aa		31.62	■■■□□ 2.65
CYLD-208	ENST00000564634	SUPT20HL1	Q3ZLR7	823 aa		31.62	■■■□□ 2.65
CYLD-208	ENST00000564634	USP44	Q9H0E7	712 aa		31.62	■■■□□ 2.65
CYLD-208	ENST00000564634	OTOF	Q9HC10	1997 aa		31.61	■■■□□ 2.65
CYLD-208	ENST00000564634	FKBP1A	P62942	108 aa	Known RBP	31.61	■■■□□ 2.65
CYLD-208	ENST00000564634	TAF7L	Q5H9L4	462 aa		31.61	■■■□□ 2.65
CYLD-208	ENST00000564634	IREB2	P48200	963 aa	Known RBP	31.6	■■■□□ 2.65
CYLD-208	ENST00000564634	RASA3	Q14644	834 aa		31.6	■■■□□ 2.65
CYLD-208	ENST00000564634	CRHR2	Q13324	411 aa		31.59	■■■□□ 2.65
CYLD-208	ENST00000564634	CCDC57	Q2TAC2	916 aa		31.59	■■■□□ 2.65
CYLD-208	ENST00000564634	CD99L2	Q8TCZ2	262 aa		31.59	■■■□□ 2.65
CYLD-208	ENST00000564634	KAZALD1	Q96I82	304 aa		31.59	■■■□□ 2.65

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms