RNA–Protein interactions for RNA: ENST00000564480.1

KNOP1-202, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 2

Gene KNOP1, Length 1,020 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-202ENST00000564480 C15orf52Q6ZUT6 534 aaKnown RBP17.6■□□□□ 0.41
KNOP1-202ENST00000564480 PCDH10Q9P2E7 1040 aa17.6■□□□□ 0.41
KNOP1-202ENST00000564480 CLRN2A0PK11 232 aa17.59■□□□□ 0.41
KNOP1-202ENST00000564480 IGF2BP3O00425 579 aaKnown RBP eCLIP17.59■□□□□ 0.41
KNOP1-202ENST00000564480 VAMP4O75379 141 aa17.59■□□□□ 0.41
KNOP1-202ENST00000564480 KCNJ4P48050 445 aa17.59■□□□□ 0.41
KNOP1-202ENST00000564480 FKBP5Q13451 457 aaPredicted RBP17.59■□□□□ 0.41
KNOP1-202ENST00000564480 IFNL1Q8IU54 200 aa17.59■□□□□ 0.41
KNOP1-202ENST00000564480 MTMR14Q8NCE2 650 aa17.59■□□□□ 0.41
KNOP1-202ENST00000564480 SLC10A4Q96EP9 437 aa17.59■□□□□ 0.41
KNOP1-202ENST00000564480 ANKRD18BA2A2Z9 1011 aa17.58■□□□□ 0.4
KNOP1-202ENST00000564480 F6X3S4 739 aa17.58■□□□□ 0.4
KNOP1-202ENST00000564480 IL1R1P14778 569 aa17.58■□□□□ 0.4
KNOP1-202ENST00000564480 GJA5P36382 358 aa17.58■□□□□ 0.4
KNOP1-202ENST00000564480 CFAP100Q494V2 611 aa17.58■□□□□ 0.4
KNOP1-202ENST00000564480 NBPF12Q5TAG4 269 aaPredicted RBP17.58■□□□□ 0.4
KNOP1-202ENST00000564480 WNK4Q96J92 1243 aa17.58■□□□□ 0.4
KNOP1-202ENST00000564480 ZNF594Q96JF6 807 aaPredicted RBP17.58■□□□□ 0.4
KNOP1-202ENST00000564480 MYH16Q9H6N6 1097 aa17.58■□□□□ 0.4
KNOP1-202ENST00000564480 FANCIQ9NVI1 1328 aa17.57■□□□□ 0.4
KNOP1-202ENST00000564480 SPDYE2BA6NHP3 402 aa17.57■□□□□ 0.4
KNOP1-202ENST00000564480 SPDYE6P0CI01 402 aa17.57■□□□□ 0.4
KNOP1-202ENST00000564480 CAP1Q01518 475 aa17.57■□□□□ 0.4
KNOP1-202ENST00000564480 IL16Q14005 1332 aa17.56■□□□□ 0.4
KNOP1-202ENST00000564480 MANSC4A6NHS7 340 aaPredicted RBP17.56■□□□□ 0.4
KNOP1-202ENST00000564480 USP2O75604 605 aaPredicted RBP17.56■□□□□ 0.4
KNOP1-202ENST00000564480 BEND3Q5T5X7 828 aa17.56■□□□□ 0.4
KNOP1-202ENST00000564480 COL1A1P02452 1464 aaPredicted RBP17.56■□□□□ 0.4
KNOP1-202ENST00000564480 POTEFA5A3E0 1075 aa17.55■□□□□ 0.4
KNOP1-202ENST00000564480 IFIT5Q13325 482 aaKnown RBP17.55■□□□□ 0.4
KNOP1-202ENST00000564480 LMBR1LQ6UX01 489 aa17.55■□□□□ 0.4
KNOP1-202ENST00000564480 OTOP1Q7RTM1 612 aa17.55■□□□□ 0.4
KNOP1-202ENST00000564480 CDAN1Q8IWY9 1227 aa17.55■□□□□ 0.4
KNOP1-202ENST00000564480 PTPN18Q99952 460 aa17.55■□□□□ 0.4
KNOP1-202ENST00000564480 TRIM17Q9Y577 477 aa17.55■□□□□ 0.4
KNOP1-202ENST00000564480 A0A1B0GUL6 1792 aa17.54■□□□□ 0.4
KNOP1-202ENST00000564480 PLIN1O60240 522 aa17.54■□□□□ 0.4
KNOP1-202ENST00000564480 ALDH1A1P00352 501 aa17.54■□□□□ 0.4
KNOP1-202ENST00000564480 ZBTB48P10074 688 aaPredicted RBP17.54■□□□□ 0.4
KNOP1-202ENST00000564480 INHBEP58166 350 aa17.54■□□□□ 0.4
KNOP1-202ENST00000564480 EXOSC9Q06265 439 aaKnown RBP17.54■□□□□ 0.4
KNOP1-202ENST00000564480 RASA3Q14644 834 aa17.54■□□□□ 0.4
KNOP1-202ENST00000564480 VEZTQ9HBM0 779 aa17.54■□□□□ 0.4
KNOP1-202ENST00000564480 SPINK5Q9NQ38 1064 aaPredicted RBP17.54■□□□□ 0.4
KNOP1-202ENST00000564480 CHMP3Q9Y3E7 222 aa17.54■□□□□ 0.4
KNOP1-202ENST00000564480 SALL2Q9Y467 1007 aaPredicted RBP17.54■□□□□ 0.4
KNOP1-202ENST00000564480 PPP2R3BQ9Y5P8 575 aa17.54■□□□□ 0.4
KNOP1-202ENST00000564480 HTTP42858 3142 aa17.54■□□□□ 0.4
KNOP1-202ENST00000564480 PPP1R12BO60237 982 aaPredicted RBP17.53■□□□□ 0.4
KNOP1-202ENST00000564480 FKBP1AP62942 108 aaKnown RBP17.53■□□□□ 0.4
KNOP1-202ENST00000564480 ZNF804AQ7Z570 1209 aa17.53■□□□□ 0.4
KNOP1-202ENST00000564480 CRHR2Q13324 411 aa17.52■□□□□ 0.4
KNOP1-202ENST00000564480 SUPT20HL1Q3ZLR7 823 aa17.52■□□□□ 0.4
KNOP1-202ENST00000564480 FAM205AQ6ZU69 1335 aa17.51■□□□□ 0.39
KNOP1-202ENST00000564480 RBM5P52756 815 aaKnown RBP eCLIP17.51■□□□□ 0.39
KNOP1-202ENST00000564480 GRIK5Q16478 980 aa17.51■□□□□ 0.39
KNOP1-202ENST00000564480 LDHAL6AQ6ZMR3 332 aa17.51■□□□□ 0.39
KNOP1-202ENST00000564480 TDRD7Q8NHU6 1098 aaKnown RBP17.51■□□□□ 0.39
KNOP1-202ENST00000564480 CD99L2Q8TCZ2 262 aa17.51■□□□□ 0.39
KNOP1-202ENST00000564480 CNKSR2Q8WXI2 1034 aa17.51■□□□□ 0.39
KNOP1-202ENST00000564480 TEPSINQ96N21 525 aa17.51■□□□□ 0.39
KNOP1-202ENST00000564480 PUS3Q9BZE2 481 aaKnown RBP17.51■□□□□ 0.39
KNOP1-202ENST00000564480 ZNF70Q9UC06 446 aaPredicted RBP17.51■□□□□ 0.39
KNOP1-202ENST00000564480 TESPA1A2RU30 521 aaPredicted RBP17.5■□□□□ 0.39
KNOP1-202ENST00000564480 MYO1BO43795 1136 aa17.5■□□□□ 0.39
KNOP1-202ENST00000564480 GYG1P46976 350 aa17.5■□□□□ 0.39
KNOP1-202ENST00000564480 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
KNOP1-202ENST00000564480 KAZALD1Q96I82 304 aa17.5■□□□□ 0.39
KNOP1-202ENST00000564480 TDRD3Q9H7E2 651 aaKnown RBP17.5■□□□□ 0.39
KNOP1-202ENST00000564480 PTPN22Q9Y2R2 807 aa17.5■□□□□ 0.39
KNOP1-202ENST00000564480 ECM29Q5VYK3 1845 aa17.49■□□□□ 0.39
KNOP1-202ENST00000564480 LAMB1P07942 1786 aa17.49■□□□□ 0.39
KNOP1-202ENST00000564480 UNCXA6NJT0 531 aa17.49■□□□□ 0.39
KNOP1-202ENST00000564480 GRM8O00222 908 aa17.49■□□□□ 0.39
KNOP1-202ENST00000564480 IREB2P48200 963 aaKnown RBP17.49■□□□□ 0.39
KNOP1-202ENST00000564480 CCDC57Q2TAC2 916 aa17.49■□□□□ 0.39
KNOP1-202ENST00000564480 SPDYE2Q495Y8 402 aa17.49■□□□□ 0.39
KNOP1-202ENST00000564480 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.49■□□□□ 0.39
KNOP1-202ENST00000564480 ANKRD13AQ8IZ07 590 aa17.49■□□□□ 0.39
KNOP1-202ENST00000564480 MS4A4AQ96JQ5 239 aa17.49■□□□□ 0.39
KNOP1-202ENST00000564480 FAM84BQ96KN1 310 aaPredicted RBP17.49■□□□□ 0.39
KNOP1-202ENST00000564480 ELP3Q9H9T3 547 aa17.49■□□□□ 0.39
KNOP1-202ENST00000564480 CNNM1Q9NRU3 951 aa17.49■□□□□ 0.39
KNOP1-202ENST00000564480 MFSD14BQ5SR56 506 aa17.48■□□□□ 0.39
KNOP1-202ENST00000564480 WDR63Q8IWG1 891 aa17.48■□□□□ 0.39
KNOP1-202ENST00000564480 OPTNQ96CV9 577 aa17.48■□□□□ 0.39
KNOP1-202ENST00000564480 TTF2Q9UNY4 1162 aaKnown RBP17.48■□□□□ 0.39
KNOP1-202ENST00000564480 DZIP1LQ8IYY4 767 aaKnown RBP17.47■□□□□ 0.39
KNOP1-202ENST00000564480 SUCLG2Q96I99 432 aa17.47■□□□□ 0.39
KNOP1-202ENST00000564480 TMEM39BQ9GZU3 492 aa17.47■□□□□ 0.39
KNOP1-202ENST00000564480 MKI67P46013 3256 aaKnown RBP17.46■□□□□ 0.39
KNOP1-202ENST00000564480 TCP10L2B9ZVM9 353 aa17.46■□□□□ 0.39
KNOP1-202ENST00000564480 EN2P19622 333 aaPredicted RBP17.46■□□□□ 0.39
KNOP1-202ENST00000564480 HIBADHP31937 336 aaKnown RBP17.46■□□□□ 0.39
KNOP1-202ENST00000564480 SP3Q02447 781 aa17.46■□□□□ 0.39
KNOP1-202ENST00000564480 TAF7LQ5H9L4 462 aa17.46■□□□□ 0.39
KNOP1-202ENST00000564480 BRI3BPQ8WY22 251 aa17.46■□□□□ 0.39
KNOP1-202ENST00000564480 ERO1AQ96HE7 468 aa17.46■□□□□ 0.39
KNOP1-202ENST00000564480 SERPINA10Q9UK55 444 aa17.46■□□□□ 0.39
KNOP1-202ENST00000564480 RIPOR2Q9Y4F9 1068 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms