RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 KCNQ5Q9NR82 932 aa20.73■□□□□ 0.91
CMTM3-208ENST00000564247 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.73■□□□□ 0.91
CMTM3-208ENST00000564247 A0A1B0GUL6 1792 aa20.72■□□□□ 0.91
CMTM3-208ENST00000564247 MX1P20591 662 aa20.72■□□□□ 0.91
CMTM3-208ENST00000564247 PLEKHM2Q8IWE5 1019 aa20.72■□□□□ 0.91
CMTM3-208ENST00000564247 DPF2Q92785 391 aa20.72■□□□□ 0.91
CMTM3-208ENST00000564247 PASKQ96RG2 1323 aa20.72■□□□□ 0.91
CMTM3-208ENST00000564247 WTIPA6NIX2 430 aaPredicted RBP20.71■□□□□ 0.91
CMTM3-208ENST00000564247 ITGBL1O95965 494 aaPredicted RBP20.71■□□□□ 0.91
CMTM3-208ENST00000564247 FGFR2P21802 821 aa20.71■□□□□ 0.91
CMTM3-208ENST00000564247 RPS12P25398 132 aaKnown RBP20.71■□□□□ 0.91
CMTM3-208ENST00000564247 HTRA3P83110 453 aa20.71■□□□□ 0.91
CMTM3-208ENST00000564247 CCDC158Q5M9N0 1113 aa20.71■□□□□ 0.91
CMTM3-208ENST00000564247 PODNQ7Z5L7 613 aa20.71■□□□□ 0.91
CMTM3-208ENST00000564247 XAGE2Q96GT9 111 aa20.71■□□□□ 0.91
CMTM3-208ENST00000564247 ZNF804BA4D1E1 1349 aa20.71■□□□□ 0.91
CMTM3-208ENST00000564247 ERC2O15083 957 aa20.7■□□□□ 0.9
CMTM3-208ENST00000564247 VIL1P09327 827 aaKnown RBP20.7■□□□□ 0.9
CMTM3-208ENST00000564247 PDE1AP54750 535 aa20.7■□□□□ 0.9
CMTM3-208ENST00000564247 MAP1SQ66K74 1059 aaPredicted RBP20.7■□□□□ 0.9
CMTM3-208ENST00000564247 CNTROBQ8N137 903 aa20.7■□□□□ 0.9
CMTM3-208ENST00000564247 OTUD7AQ8TE49 926 aaPredicted RBP20.7■□□□□ 0.9
CMTM3-208ENST00000564247 DBNDD2Q9BQY9 259 aa20.7■□□□□ 0.9
CMTM3-208ENST00000564247 STAP2Q9UGK3 403 aa20.7■□□□□ 0.9
CMTM3-208ENST00000564247 CNOT7Q9UIV1 285 aaKnown RBP20.7■□□□□ 0.9
CMTM3-208ENST00000564247 ZBTB12Q9Y330 459 aaPredicted RBP20.7■□□□□ 0.9
CMTM3-208ENST00000564247 H7C1D1 291 aa20.69■□□□□ 0.9
CMTM3-208ENST00000564247 SKAP1Q86WV1 359 aa20.69■□□□□ 0.9
CMTM3-208ENST00000564247 OSBPL3Q9H4L5 887 aa20.69■□□□□ 0.9
CMTM3-208ENST00000564247 ECHDC1Q9NTX5 307 aa20.69■□□□□ 0.9
CMTM3-208ENST00000564247 DBNLQ9UJU6 430 aaKnown RBP20.69■□□□□ 0.9
CMTM3-208ENST00000564247 TTC41PQ6P2S7 1318 aa20.69■□□□□ 0.9
CMTM3-208ENST00000564247 ZNF609O15014 1411 aa20.69■□□□□ 0.9
CMTM3-208ENST00000564247 CAVIN4Q5BKX8 364 aa20.68■□□□□ 0.9
CMTM3-208ENST00000564247 MICALL2Q8IY33 904 aa20.68■□□□□ 0.9
CMTM3-208ENST00000564247 SNAP23O00161 211 aa20.67■□□□□ 0.9
CMTM3-208ENST00000564247 TTC39AQ5SRH9 613 aa20.67■□□□□ 0.9
CMTM3-208ENST00000564247 TXNRD3Q86VQ6 643 aa20.67■□□□□ 0.9
CMTM3-208ENST00000564247 KLRG1Q96E93 195 aa20.67■□□□□ 0.9
CMTM3-208ENST00000564247 COA1Q9GZY4 146 aa20.67■□□□□ 0.9
CMTM3-208ENST00000564247 TLR7Q9NYK1 1049 aaKnown RBP20.67■□□□□ 0.9
CMTM3-208ENST00000564247 AOX1Q06278 1338 aa20.67■□□□□ 0.9
CMTM3-208ENST00000564247 SHTN1A0MZ66 631 aa20.66■□□□□ 0.9
CMTM3-208ENST00000564247 GLRX3O76003 335 aaKnown RBP20.66■□□□□ 0.9
CMTM3-208ENST00000564247 ADORA1P30542 326 aa20.66■□□□□ 0.9
CMTM3-208ENST00000564247 VPS37DQ86XT2 251 aa20.66■□□□□ 0.9
CMTM3-208ENST00000564247 AGBL3Q8NEM8 1001 aa20.66■□□□□ 0.9
CMTM3-208ENST00000564247 ZC3H15Q8WU90 426 aaKnown RBP20.66■□□□□ 0.9
CMTM3-208ENST00000564247 CREBZFQ9NS37 354 aa20.66■□□□□ 0.9
CMTM3-208ENST00000564247 GNL3LQ9NVN8 582 aaKnown RBP20.66■□□□□ 0.9
CMTM3-208ENST00000564247 PGAP2Q9UHJ9 254 aa20.66■□□□□ 0.9
CMTM3-208ENST00000564247 SALL3Q9BXA9 1300 aa20.66■□□□□ 0.9
CMTM3-208ENST00000564247 ZNF646O15015 1829 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-208ENST00000564247 USP17L3A6NCW0 530 aa20.65■□□□□ 0.9
CMTM3-208ENST00000564247 USP17L4A6NCW7 530 aa20.65■□□□□ 0.9
CMTM3-208ENST00000564247 UQCRFS1P1P0C7P4 283 aa20.65■□□□□ 0.9
CMTM3-208ENST00000564247 HIRAP54198 1017 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-208ENST00000564247 RSBN1LQ6PCB5 846 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-208ENST00000564247 C15orf52Q6ZUT6 534 aaKnown RBP20.65■□□□□ 0.9
CMTM3-208ENST00000564247 USP17L1Q7RTZ2 530 aa20.65■□□□□ 0.9
CMTM3-208ENST00000564247 TRPM4Q8TD43 1214 aa20.65■□□□□ 0.9
CMTM3-208ENST00000564247 PCNTO95613 3336 aa20.64■□□□□ 0.89
CMTM3-208ENST00000564247 IRS2Q9Y4H2 1338 aa20.64■□□□□ 0.89
CMTM3-208ENST00000564247 ATP5JP18859 108 aa20.64■□□□□ 0.89
CMTM3-208ENST00000564247 KLRK1P26718 216 aa20.64■□□□□ 0.89
CMTM3-208ENST00000564247 HIBADHP31937 336 aaKnown RBP20.63■□□□□ 0.89
CMTM3-208ENST00000564247 CCDC102BQ68D86 513 aa20.63■□□□□ 0.89
CMTM3-208ENST00000564247 GMLQ99445 158 aa20.63■□□□□ 0.89
CMTM3-208ENST00000564247 TRPM7Q96QT4 1865 aa20.62■□□□□ 0.89
CMTM3-208ENST00000564247 TMEM88BA6NKF7 163 aa20.62■□□□□ 0.89
CMTM3-208ENST00000564247 BCAMP50895 628 aa20.62■□□□□ 0.89
CMTM3-208ENST00000564247 TTC22Q5TAA0 569 aa20.62■□□□□ 0.89
CMTM3-208ENST00000564247 STRIP1Q5VSL9 837 aa20.62■□□□□ 0.89
CMTM3-208ENST00000564247 TSHZ3Q63HK5 1081 aa20.62■□□□□ 0.89
CMTM3-208ENST00000564247 SAMD7Q7Z3H4 446 aa20.62■□□□□ 0.89
CMTM3-208ENST00000564247 ZNF804AQ7Z570 1209 aa20.62■□□□□ 0.89
CMTM3-208ENST00000564247 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.62■□□□□ 0.89
CMTM3-208ENST00000564247 ZNF512BQ96KM6 892 aaPredicted RBP20.62■□□□□ 0.89
CMTM3-208ENST00000564247 FAM84BQ96KN1 310 aaPredicted RBP20.62■□□□□ 0.89
CMTM3-208ENST00000564247 BOLA2Q9H3K6 86 aa20.62■□□□□ 0.89
CMTM3-208ENST00000564247 GYG1P46976 350 aa20.61■□□□□ 0.89
CMTM3-208ENST00000564247 ZNF280AP59817 542 aaPredicted RBP20.61■□□□□ 0.89
CMTM3-208ENST00000564247 DACT2Q5SW24 774 aa20.61■□□□□ 0.89
CMTM3-208ENST00000564247 FBXO33Q7Z6M2 555 aa20.61■□□□□ 0.89
CMTM3-208ENST00000564247 PI4K2BQ8TCG2 481 aa20.61■□□□□ 0.89
CMTM3-208ENST00000564247 FRAT2O75474 233 aaPredicted RBP20.6■□□□□ 0.89
CMTM3-208ENST00000564247 EGFRP00533 1210 aa20.6■□□□□ 0.89
CMTM3-208ENST00000564247 PHKA1P46020 1223 aa20.6■□□□□ 0.89
CMTM3-208ENST00000564247 TBC1D10BQ4KMP7 808 aaPredicted RBP20.6■□□□□ 0.89
CMTM3-208ENST00000564247 CD209Q9NNX6 404 aa20.6■□□□□ 0.89
CMTM3-208ENST00000564247 POLR2AP24928 1970 aaKnown RBP20.59■□□□□ 0.89
CMTM3-208ENST00000564247 MYO3BQ8WXR4 1341 aa20.59■□□□□ 0.89
CMTM3-208ENST00000564247 ARAP2Q8WZ64 1704 aa20.59■□□□□ 0.89
CMTM3-208ENST00000564247 USP17L8P0C7I0 530 aa20.59■□□□□ 0.89
CMTM3-208ENST00000564247 BMP2KLQ5H9B9 411 aa20.59■□□□□ 0.89
CMTM3-208ENST00000564247 JMYQ8N9B5 988 aa20.59■□□□□ 0.89
CMTM3-208ENST00000564247 TRIM6-TRIM34B2RNG4 842 aa20.58■□□□□ 0.89
CMTM3-208ENST00000564247 SEMA3EO15041 775 aa20.58■□□□□ 0.89
CMTM3-208ENST00000564247 ARID4AP29374 1257 aaPredicted RBP20.58■□□□□ 0.89
CMTM3-208ENST00000564247 KIF4BQ2VIQ3 1234 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms