RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 CLRN2A0PK11 232 aa20.58■□□□□ 0.89
RNF40-205ENST00000563909 PCCAP05165 728 aaPredicted RBP20.58■□□□□ 0.89
RNF40-205ENST00000563909 MTFR1Q15390 333 aa20.58■□□□□ 0.89
RNF40-205ENST00000563909 BRI3BPQ8WY22 251 aa20.58■□□□□ 0.89
RNF40-205ENST00000563909 UNC80Q8N2C7 3258 aa20.58■□□□□ 0.88
RNF40-205ENST00000563909 KIF22Q14807 665 aa20.57■□□□□ 0.88
RNF40-205ENST00000563909 MYD88Q99836 296 aa20.57■□□□□ 0.88
RNF40-205ENST00000563909 VEZTQ9HBM0 779 aa20.57■□□□□ 0.88
RNF40-205ENST00000563909 BSDC1Q9NW68 430 aaPredicted RBP20.57■□□□□ 0.88
RNF40-205ENST00000563909 LAS1LQ9Y4W2 734 aaKnown RBP20.57■□□□□ 0.88
RNF40-205ENST00000563909 PCDHAC2Q9Y5I4 1007 aa20.57■□□□□ 0.88
RNF40-205ENST00000563909 ZNF804BA4D1E1 1349 aa20.56■□□□□ 0.88
RNF40-205ENST00000563909 CCL15-CCL14A0A0B4J2E2 113 aa20.56■□□□□ 0.88
RNF40-205ENST00000563909 A0A1W2PPC1 479 aa20.56■□□□□ 0.88
RNF40-205ENST00000563909 CHL1O00533 1208 aa20.56■□□□□ 0.88
RNF40-205ENST00000563909 MYO1BO43795 1136 aa20.56■□□□□ 0.88
RNF40-205ENST00000563909 CCL15Q16663 113 aa20.56■□□□□ 0.88
RNF40-205ENST00000563909 MTMR14Q8NCE2 650 aa20.56■□□□□ 0.88
RNF40-205ENST00000563909 ZBTB7BO15156 539 aaPredicted RBP20.55■□□□□ 0.88
RNF40-205ENST00000563909 GOLGA2Q08379 1002 aa20.55■□□□□ 0.88
RNF40-205ENST00000563909 FAM43AQ8N2R8 423 aa20.55■□□□□ 0.88
RNF40-205ENST00000563909 CCDC191Q8NCU4 936 aa20.55■□□□□ 0.88
RNF40-205ENST00000563909 NKX2-3Q8TAU0 364 aa20.55■□□□□ 0.88
RNF40-205ENST00000563909 CNKSR2Q8WXI2 1034 aa20.55■□□□□ 0.88
RNF40-205ENST00000563909 LEMD3Q9Y2U8 911 aa20.55■□□□□ 0.88
RNF40-205ENST00000563909 WDHD1O75717 1129 aaPredicted RBP20.54■□□□□ 0.88
RNF40-205ENST00000563909 KLRK1P26718 216 aa20.54■□□□□ 0.88
RNF40-205ENST00000563909 GTF2A2P52657 109 aa20.54■□□□□ 0.88
RNF40-205ENST00000563909 LACTBP83111 547 aaPredicted RBP20.54■□□□□ 0.88
RNF40-205ENST00000563909 LMOD3Q0VAK6 560 aa20.54■□□□□ 0.88
RNF40-205ENST00000563909 RASA3Q14644 834 aa20.54■□□□□ 0.88
RNF40-205ENST00000563909 UBE2Q1Q7Z7E8 422 aa20.54■□□□□ 0.88
RNF40-205ENST00000563909 PRMT6Q96LA8 375 aaPredicted RBP20.54■□□□□ 0.88
RNF40-205ENST00000563909 CWC25Q9NXE8 425 aaPredicted RBP20.54■□□□□ 0.88
RNF40-205ENST00000563909 ECM2O94769 699 aaPredicted RBP20.53■□□□□ 0.88
RNF40-205ENST00000563909 GNRH1P01148 92 aa20.53■□□□□ 0.88
RNF40-205ENST00000563909 HOXB7P09629 217 aa20.53■□□□□ 0.88
RNF40-205ENST00000563909 PRKRIP1Q9H875 184 aaPredicted RBP20.53■□□□□ 0.88
RNF40-205ENST00000563909 SPDYE2BA6NHP3 402 aa20.52■□□□□ 0.88
RNF40-205ENST00000563909 F8W031 263 aaPredicted RBP20.52■□□□□ 0.88
RNF40-205ENST00000563909 SPDYE6P0CI01 402 aa20.52■□□□□ 0.88
RNF40-205ENST00000563909 TMPOP42166 694 aaKnown RBP20.52■□□□□ 0.88
RNF40-205ENST00000563909 GJA8P48165 433 aa20.52■□□□□ 0.88
RNF40-205ENST00000563909 PRMT2P55345 433 aa20.52■□□□□ 0.88
RNF40-205ENST00000563909 CTSWP56202 376 aa20.52■□□□□ 0.88
RNF40-205ENST00000563909 CFAP100Q494V2 611 aa20.52■□□□□ 0.88
RNF40-205ENST00000563909 CERS5Q8N5B7 392 aa20.52■□□□□ 0.88
RNF40-205ENST00000563909 GREM2Q9H772 168 aa20.52■□□□□ 0.88
RNF40-205ENST00000563909 AOX1Q06278 1338 aa20.52■□□□□ 0.87
RNF40-205ENST00000563909 ANP32CO43423 234 aa20.51■□□□□ 0.87
RNF40-205ENST00000563909 TLR2O60603 784 aa20.51■□□□□ 0.87
RNF40-205ENST00000563909 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.51■□□□□ 0.87
RNF40-205ENST00000563909 TTLL11Q8NHH1 800 aa20.51■□□□□ 0.87
RNF40-205ENST00000563909 ZSWIM8A7E2V4 1837 aa20.5■□□□□ 0.87
RNF40-205ENST00000563909 GJB1P08034 283 aa20.5■□□□□ 0.87
RNF40-205ENST00000563909 PHAXQ9H814 394 aaKnown RBP20.5■□□□□ 0.87
RNF40-205ENST00000563909 STAP2Q9UGK3 403 aa20.5■□□□□ 0.87
RNF40-205ENST00000563909 MYBBP1AQ9BQG0 1328 aaKnown RBP20.5■□□□□ 0.87
RNF40-205ENST00000563909 CCL5P13501 91 aa20.49■□□□□ 0.87
RNF40-205ENST00000563909 DUSP27Q5VZP5 1158 aa20.49■□□□□ 0.87
RNF40-205ENST00000563909 CD209Q9NNX6 404 aa20.49■□□□□ 0.87
RNF40-205ENST00000563909 EVI5O60447 810 aa20.48■□□□□ 0.87
RNF40-205ENST00000563909 RBM5P52756 815 aaKnown RBP eCLIP20.48■□□□□ 0.87
RNF40-205ENST00000563909 VGLL4Q14135 290 aa20.48■□□□□ 0.87
RNF40-205ENST00000563909 NEUROD2Q15784 382 aa20.48■□□□□ 0.87
RNF40-205ENST00000563909 DEFB123Q8N688 67 aa20.48■□□□□ 0.87
RNF40-205ENST00000563909 COL25A1Q9BXS0 654 aaPredicted RBP20.48■□□□□ 0.87
RNF40-205ENST00000563909 ANKRD2Q9GZV1 360 aa20.48■□□□□ 0.87
RNF40-205ENST00000563909 RNF208Q9H0X6 261 aa20.48■□□□□ 0.87
RNF40-205ENST00000563909 SPEF2Q9C093 1822 aa20.48■□□□□ 0.87
RNF40-205ENST00000563909 OTOFQ9HC10 1997 aa20.47■□□□□ 0.87
RNF40-205ENST00000563909 FARP2O94887 1054 aaPredicted RBP20.47■□□□□ 0.87
RNF40-205ENST00000563909 GRK4P32298 578 aa20.47■□□□□ 0.87
RNF40-205ENST00000563909 KCNJ4P48050 445 aa20.47■□□□□ 0.87
RNF40-205ENST00000563909 MAP3K9P80192 1104 aa20.47■□□□□ 0.87
RNF40-205ENST00000563909 RAET1EQ8TD07 263 aa20.47■□□□□ 0.87
RNF40-205ENST00000563909 BIN2Q9UBW5 565 aaPredicted RBP20.47■□□□□ 0.87
RNF40-205ENST00000563909 SRRDQ9UH36 339 aa20.47■□□□□ 0.87
RNF40-205ENST00000563909 RIPOR2Q9Y4F9 1068 aa20.47■□□□□ 0.87
RNF40-205ENST00000563909 ECM29Q5VYK3 1845 aa20.46■□□□□ 0.87
RNF40-205ENST00000563909 IGHMBP2P38935 993 aaKnown RBP20.46■□□□□ 0.87
RNF40-205ENST00000563909 PSMC4P43686 418 aa20.46■□□□□ 0.87
RNF40-205ENST00000563909 METTL22Q9BUU2 404 aaPredicted RBP20.46■□□□□ 0.87
RNF40-205ENST00000563909 CSADQ9Y600 493 aa20.46■□□□□ 0.87
RNF40-205ENST00000563909 CETPP11597 493 aa20.45■□□□□ 0.86
RNF40-205ENST00000563909 CTGFP29279 349 aa20.45■□□□□ 0.86
RNF40-205ENST00000563909 CDAN1Q8IWY9 1227 aa20.45■□□□□ 0.86
RNF40-205ENST00000563909 TRIM47Q96LD4 638 aa20.45■□□□□ 0.86
RNF40-205ENST00000563909 STXBP5LQ9Y2K9 1186 aa20.45■□□□□ 0.86
RNF40-205ENST00000563909 BTBD19C9JJ37 291 aa20.44■□□□□ 0.86
RNF40-205ENST00000563909 HOXD10P28358 340 aa20.44■□□□□ 0.86
RNF40-205ENST00000563909 TNFAIP1Q13829 316 aa20.44■□□□□ 0.86
RNF40-205ENST00000563909 GPR153Q6NV75 609 aa20.44■□□□□ 0.86
RNF40-205ENST00000563909 Q7L0L9 218 aa20.44■□□□□ 0.86
RNF40-205ENST00000563909 U2AF1L4Q8WU68 220 aaKnown RBP20.44■□□□□ 0.86
RNF40-205ENST00000563909 ZCCHC17Q9NP64 241 aaKnown RBP20.44■□□□□ 0.86
RNF40-205ENST00000563909 FMNL1O95466 1100 aaPredicted RBP20.43■□□□□ 0.86
RNF40-205ENST00000563909 OSBPP22059 807 aa20.43■□□□□ 0.86
RNF40-205ENST00000563909 HELBQ8NG08 1087 aaPredicted RBP20.43■□□□□ 0.86
RNF40-205ENST00000563909 TEPSINQ96N21 525 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms