RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 DZIP1LQ8IYY4 767 aaKnown RBP18.49■□□□□ 0.55
RPUSD1-204ENST00000563560 MTMR14Q8NCE2 650 aa18.49■□□□□ 0.55
RPUSD1-204ENST00000563560 GGA3Q9NZ52 723 aa18.49■□□□□ 0.55
RPUSD1-204ENST00000563560 HDAC5Q9UQL6 1122 aa18.49■□□□□ 0.55
RPUSD1-204ENST00000563560 AOX1Q06278 1338 aa18.49■□□□□ 0.55
RPUSD1-204ENST00000563560 ADM5C9JUS6 153 aa18.48■□□□□ 0.55
RPUSD1-204ENST00000563560 PUM3Q15397 648 aaKnown RBP18.48■□□□□ 0.55
RPUSD1-204ENST00000563560 KIAA0825Q8IV33 1275 aa18.48■□□□□ 0.55
RPUSD1-204ENST00000563560 MKRN1Q9UHC7 482 aaKnown RBP18.48■□□□□ 0.55
RPUSD1-204ENST00000563560 PCDHAC2Q9Y5I4 1007 aa18.48■□□□□ 0.55
RPUSD1-204ENST00000563560 TLL2Q9Y6L7 1015 aa18.48■□□□□ 0.55
RPUSD1-204ENST00000563560 GNAI2P04899 355 aa18.47■□□□□ 0.55
RPUSD1-204ENST00000563560 ANGEL2Q5VTE6 544 aaKnown RBP18.47■□□□□ 0.55
RPUSD1-204ENST00000563560 SIL1Q9H173 461 aa18.47■□□□□ 0.55
RPUSD1-204ENST00000563560 SRGAP3O43295 1099 aa18.46■□□□□ 0.55
RPUSD1-204ENST00000563560 IL15P40933 162 aaPredicted RBP18.46■□□□□ 0.55
RPUSD1-204ENST00000563560 VEGFBP49765 207 aa18.46■□□□□ 0.55
RPUSD1-204ENST00000563560 BCAMP50895 628 aa18.46■□□□□ 0.55
RPUSD1-204ENST00000563560 POLA2Q14181 598 aa18.46■□□□□ 0.55
RPUSD1-204ENST00000563560 GRIK5Q16478 980 aa18.46■□□□□ 0.55
RPUSD1-204ENST00000563560 KRT26Q7Z3Y9 468 aa18.46■□□□□ 0.55
RPUSD1-204ENST00000563560 SAPCD2Q86UD0 394 aa18.46■□□□□ 0.55
RPUSD1-204ENST00000563560 LPIN2Q92539 896 aa18.46■□□□□ 0.55
RPUSD1-204ENST00000563560 JAG2Q9Y219 1238 aa18.46■□□□□ 0.55
RPUSD1-204ENST00000563560 PAPPA2Q9BXP8 1791 aa18.45■□□□□ 0.54
RPUSD1-204ENST00000563560 CELF2O95319 508 aaKnown RBP18.45■□□□□ 0.54
RPUSD1-204ENST00000563560 PANK1Q8TE04 598 aa18.45■□□□□ 0.54
RPUSD1-204ENST00000563560 SSH3Q8TE77 659 aa18.45■□□□□ 0.54
RPUSD1-204ENST00000563560 FBXW7Q969H0 707 aa18.45■□□□□ 0.54
RPUSD1-204ENST00000563560 LAMB1P07942 1786 aa18.45■□□□□ 0.54
RPUSD1-204ENST00000563560 DCPSQ96C86 337 aaKnown RBP18.44■□□□□ 0.54
RPUSD1-204ENST00000563560 AKAP11Q9UKA4 1901 aa18.43■□□□□ 0.54
RPUSD1-204ENST00000563560 MFSD14BQ5SR56 506 aa18.43■□□□□ 0.54
RPUSD1-204ENST00000563560 OGFOD1Q8N543 542 aa18.43■□□□□ 0.54
RPUSD1-204ENST00000563560 HHIPL1Q96JK4 782 aa18.43■□□□□ 0.54
RPUSD1-204ENST00000563560 SCAF8Q9UPN6 1271 aaKnown RBP18.43■□□□□ 0.54
RPUSD1-204ENST00000563560 IQSEC3Q9UPP2 1182 aaPredicted RBP18.43■□□□□ 0.54
RPUSD1-204ENST00000563560 SSC5DA1L4H1 1573 aa18.42■□□□□ 0.54
RPUSD1-204ENST00000563560 ATP8B2P98198 1209 aa18.42■□□□□ 0.54
RPUSD1-204ENST00000563560 ATP2B3Q16720 1220 aa18.42■□□□□ 0.54
RPUSD1-204ENST00000563560 DEFB115Q30KQ5 88 aa18.42■□□□□ 0.54
RPUSD1-204ENST00000563560 CDCA5Q96FF9 252 aa18.42■□□□□ 0.54
RPUSD1-204ENST00000563560 CEP126Q9P2H0 1117 aa18.42■□□□□ 0.54
RPUSD1-204ENST00000563560 RCAN3Q9UKA8 241 aa18.42■□□□□ 0.54
RPUSD1-204ENST00000563560 SPDYE2BA6NHP3 402 aa18.41■□□□□ 0.54
RPUSD1-204ENST00000563560 IFIT1P09914 478 aaKnown RBP18.41■□□□□ 0.54
RPUSD1-204ENST00000563560 SPDYE6P0CI01 402 aa18.41■□□□□ 0.54
RPUSD1-204ENST00000563560 SLC5A1P13866 664 aa18.41■□□□□ 0.54
RPUSD1-204ENST00000563560 CAVIN4Q5BKX8 364 aa18.41■□□□□ 0.54
RPUSD1-204ENST00000563560 ITPRIPQ8IWB1 547 aa18.41■□□□□ 0.54
RPUSD1-204ENST00000563560 FTSJ3Q8IY81 847 aaKnown RBP18.41■□□□□ 0.54
RPUSD1-204ENST00000563560 PRMT6Q96LA8 375 aaPredicted RBP18.41■□□□□ 0.54
RPUSD1-204ENST00000563560 C1orf115Q9H7X2 142 aa18.41■□□□□ 0.54
RPUSD1-204ENST00000563560 ADORA1P30542 326 aa18.4■□□□□ 0.54
RPUSD1-204ENST00000563560 TFCP2Q12800 502 aa18.4■□□□□ 0.54
RPUSD1-204ENST00000563560 CFAP100Q494V2 611 aa18.4■□□□□ 0.54
RPUSD1-204ENST00000563560 SULF1Q8IWU6 871 aa18.4■□□□□ 0.54
RPUSD1-204ENST00000563560 HDAC9Q9UKV0 1011 aa18.4■□□□□ 0.54
RPUSD1-204ENST00000563560 OTOFQ9HC10 1997 aa18.4■□□□□ 0.54
RPUSD1-204ENST00000563560 WDR33Q9C0J8 1336 aaKnown RBP18.4■□□□□ 0.54
RPUSD1-204ENST00000563560 F8W031 263 aaPredicted RBP18.39■□□□□ 0.53
RPUSD1-204ENST00000563560 PHKA1P46020 1223 aa18.39■□□□□ 0.53
RPUSD1-204ENST00000563560 CEP85Q6P2H3 762 aa18.39■□□□□ 0.53
RPUSD1-204ENST00000563560 SERPINA10Q9UK55 444 aa18.39■□□□□ 0.53
RPUSD1-204ENST00000563560 ABT1Q9ULW3 272 aaKnown RBP18.39■□□□□ 0.53
RPUSD1-204ENST00000563560 NOP58Q9Y2X3 529 aaKnown RBP18.39■□□□□ 0.53
RPUSD1-204ENST00000563560 MYO5AQ9Y4I1 1855 aaKnown RBP18.39■□□□□ 0.53
RPUSD1-204ENST00000563560 FAM155AB1AL88 458 aaPredicted RBP18.38■□□□□ 0.53
RPUSD1-204ENST00000563560 TIMM10P62072 90 aa18.38■□□□□ 0.53
RPUSD1-204ENST00000563560 MVPQ14764 893 aaKnown RBP18.38■□□□□ 0.53
RPUSD1-204ENST00000563560 CYP4F22Q6NT55 531 aa18.38■□□□□ 0.53
RPUSD1-204ENST00000563560 CAPNS2Q96L46 248 aa18.38■□□□□ 0.53
RPUSD1-204ENST00000563560 MRIQ9BWK5 157 aa18.38■□□□□ 0.53
RPUSD1-204ENST00000563560 GBA2Q9HCG7 927 aaPredicted RBP18.38■□□□□ 0.53
RPUSD1-204ENST00000563560 MYH2Q9UKX2 1941 aa18.38■□□□□ 0.53
RPUSD1-204ENST00000563560 SALL1Q9NSC2 1324 aa18.38■□□□□ 0.53
RPUSD1-204ENST00000563560 A0A1B0GUL7 405 aa18.37■□□□□ 0.53
RPUSD1-204ENST00000563560 HDLBPQ00341 1268 aaKnown RBP18.37■□□□□ 0.53
RPUSD1-204ENST00000563560 DLGAP5Q15398 846 aa18.37■□□□□ 0.53
RPUSD1-204ENST00000563560 C20orf194Q5TEA3 1177 aa18.37■□□□□ 0.53
RPUSD1-204ENST00000563560 TBC1D22AQ8WUA7 517 aa18.37■□□□□ 0.53
RPUSD1-204ENST00000563560 ZNF408Q9H9D4 720 aa18.37■□□□□ 0.53
RPUSD1-204ENST00000563560 ZBTB40Q9NUA8 1239 aa18.37■□□□□ 0.53
RPUSD1-204ENST00000563560 TTF2Q9UNY4 1162 aaKnown RBP18.37■□□□□ 0.53
RPUSD1-204ENST00000563560 SUGT1Q9Y2Z0 365 aa18.37■□□□□ 0.53
RPUSD1-204ENST00000563560 PDS5AQ29RF7 1337 aaKnown RBP18.37■□□□□ 0.53
RPUSD1-204ENST00000563560 HSPA1AP0DMV8 641 aaKnown RBP18.36■□□□□ 0.53
RPUSD1-204ENST00000563560 HSPA1BP0DMV9 641 aaKnown RBP18.36■□□□□ 0.53
RPUSD1-204ENST00000563560 CRKP46108 304 aa18.36■□□□□ 0.53
RPUSD1-204ENST00000563560 SPDYE2Q495Y8 402 aa18.36■□□□□ 0.53
RPUSD1-204ENST00000563560 PRAMEF18Q5VWM3 479 aa18.36■□□□□ 0.53
RPUSD1-204ENST00000563560 CCDC102BQ68D86 513 aa18.36■□□□□ 0.53
RPUSD1-204ENST00000563560 VPS37DQ86XT2 251 aa18.36■□□□□ 0.53
RPUSD1-204ENST00000563560 APOBEC3FQ8IUX4 373 aaKnown RBP18.36■□□□□ 0.53
RPUSD1-204ENST00000563560 XAGE2Q96GT9 111 aa18.36■□□□□ 0.53
RPUSD1-204ENST00000563560 WBP1LQ9NX94 342 aa18.36■□□□□ 0.53
RPUSD1-204ENST00000563560 CHAF1AQ13111 956 aaPredicted RBP18.35■□□□□ 0.53
RPUSD1-204ENST00000563560 SIRT2Q8IXJ6 389 aa18.35■□□□□ 0.53
RPUSD1-204ENST00000563560 SEMA3EO15041 775 aa18.34■□□□□ 0.53
RPUSD1-204ENST00000563560 HUNKP57058 714 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms