RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 CLP1Q92989 425 aaKnown RBP7.62□□□□□ -1.19
CNOT1-205ENST00000563283 IFT43Q96FT9 208 aa7.62□□□□□ -1.19
CNOT1-205ENST00000563283 RPRD2Q5VT52 1461 aaKnown RBP7.62□□□□□ -1.19
CNOT1-205ENST00000563283 PTPRTO14522 1441 aa7.61□□□□□ -1.19
CNOT1-205ENST00000563283 TMEM131LA2VDJ0 1609 aa7.61□□□□□ -1.19
CNOT1-205ENST00000563283 SPDYE3A6NKU9 549 aa7.61□□□□□ -1.19
CNOT1-205ENST00000563283 ARHGAP23Q9P227 1491 aa7.61□□□□□ -1.19
CNOT1-205ENST00000563283 POLR1AO95602 1720 aaPredicted RBP7.61□□□□□ -1.19
CNOT1-205ENST00000563283 KDM5AP29375 1690 aaKnown RBP7.6□□□□□ -1.19
CNOT1-205ENST00000563283 LTBP4Q8N2S1 1624 aa7.6□□□□□ -1.19
CNOT1-205ENST00000563283 OPLAHO14841 1288 aa7.6□□□□□ -1.19
CNOT1-205ENST00000563283 MAP3K6O95382 1288 aa7.6□□□□□ -1.19
CNOT1-205ENST00000563283 SPATA31C1P0DKV0 1188 aa7.6□□□□□ -1.19
CNOT1-205ENST00000563283 NID1P14543 1247 aa7.6□□□□□ -1.19
CNOT1-205ENST00000563283 TBC1D8BQ0IIM8 1120 aa7.6□□□□□ -1.19
CNOT1-205ENST00000563283 C16orf46Q6P387 395 aa7.6□□□□□ -1.19
CNOT1-205ENST00000563283 C8orf86Q6ZUL3 223 aa7.6□□□□□ -1.19
CNOT1-205ENST00000563283 TREML1Q86YW5 311 aa7.6□□□□□ -1.19
CNOT1-205ENST00000563283 DNAJB12Q9NXW2 375 aaKnown RBP7.6□□□□□ -1.19
CNOT1-205ENST00000563283 SLIT1O75093 1534 aa7.6□□□□□ -1.19
CNOT1-205ENST00000563283 STRCP1A6NGW2 1772 aa7.59□□□□□ -1.19
CNOT1-205ENST00000563283 SPHKAPQ2M3C7 1700 aa7.59□□□□□ -1.19
CNOT1-205ENST00000563283 CD163Q86VB7 1156 aa7.59□□□□□ -1.19
CNOT1-205ENST00000563283 THEMISQ8N1K5 641 aaPredicted RBP7.59□□□□□ -1.19
CNOT1-205ENST00000563283 SAP130Q9H0E3 1048 aa7.59□□□□□ -1.19
CNOT1-205ENST00000563283 IGFLR1Q9H665 355 aa7.59□□□□□ -1.19
CNOT1-205ENST00000563283 RTCBQ9Y3I0 505 aaKnown RBP7.59□□□□□ -1.19
CNOT1-205ENST00000563283 MED14O60244 1454 aa7.59□□□□□ -1.19
CNOT1-205ENST00000563283 SETD5Q9C0A6 1442 aa7.59□□□□□ -1.19
CNOT1-205ENST00000563283 C1QTNF9BB2RNN3 333 aa7.58□□□□□ -1.2
CNOT1-205ENST00000563283 PTCD1O75127 700 aaKnown RBP7.58□□□□□ -1.2
CNOT1-205ENST00000563283 EGFRP00533 1210 aa7.58□□□□□ -1.2
CNOT1-205ENST00000563283 CHRNA4P43681 627 aa7.58□□□□□ -1.2
CNOT1-205ENST00000563283 CCDC82Q8N4S0 544 aa7.58□□□□□ -1.2
CNOT1-205ENST00000563283 MKNK1Q9BUB5 465 aa7.58□□□□□ -1.2
CNOT1-205ENST00000563283 ZFATQ9P243 1243 aa7.58□□□□□ -1.2
CNOT1-205ENST00000563283 SLAIN2Q9P270 581 aa7.58□□□□□ -1.2
CNOT1-205ENST00000563283 NAGPAQ9UK23 515 aa7.58□□□□□ -1.2
CNOT1-205ENST00000563283 CLTCL1P53675 1640 aa7.58□□□□□ -1.2
CNOT1-205ENST00000563283 ZFYVE9O95405 1425 aa7.58□□□□□ -1.2
CNOT1-205ENST00000563283 RAB3GAP2Q9H2M9 1393 aa7.58□□□□□ -1.2
CNOT1-205ENST00000563283 TMEM2Q9UHN6 1383 aa7.58□□□□□ -1.2
CNOT1-205ENST00000563283 ADGRB3O60242 1522 aa7.57□□□□□ -1.2
CNOT1-205ENST00000563283 TNFRSF10BO14763 440 aa7.57□□□□□ -1.2
CNOT1-205ENST00000563283 LILRB5O75023 590 aa7.57□□□□□ -1.2
CNOT1-205ENST00000563283 BRD2P25440 801 aaKnown RBP7.57□□□□□ -1.2
CNOT1-205ENST00000563283 PCSK7Q16549 785 aa7.57□□□□□ -1.2
CNOT1-205ENST00000563283 PRRT3Q5FWE3 981 aa7.57□□□□□ -1.2
CNOT1-205ENST00000563283 KRT25Q7Z3Z0 450 aa7.57□□□□□ -1.2
CNOT1-205ENST00000563283 ANKLE2Q86XL3 938 aa7.57□□□□□ -1.2
CNOT1-205ENST00000563283 ETFBKMTQ8IXQ9 262 aa7.57□□□□□ -1.2
CNOT1-205ENST00000563283 MPHOSPH9Q99550 1183 aa7.57□□□□□ -1.2
CNOT1-205ENST00000563283 PCGF6Q9BYE7 350 aa7.57□□□□□ -1.2
CNOT1-205ENST00000563283 SLC52A1Q9NWF4 448 aa7.57□□□□□ -1.2
CNOT1-205ENST00000563283 USP20Q9Y2K6 914 aa7.57□□□□□ -1.2
CNOT1-205ENST00000563283 ZNF335Q9H4Z2 1342 aaPredicted RBP7.56□□□□□ -1.2
CNOT1-205ENST00000563283 SASH3O75995 380 aa7.56□□□□□ -1.2
CNOT1-205ENST00000563283 RARAP10276 462 aa7.56□□□□□ -1.2
CNOT1-205ENST00000563283 TARSP26639 723 aaKnown RBP7.56□□□□□ -1.2
CNOT1-205ENST00000563283 BAG6P46379 1132 aa7.56□□□□□ -1.2
CNOT1-205ENST00000563283 PSAPL1Q6NUJ1 521 aa7.56□□□□□ -1.2
CNOT1-205ENST00000563283 CAPN12Q6ZSI9 719 aa7.56□□□□□ -1.2
CNOT1-205ENST00000563283 DHX32Q7L7V1 743 aaKnown RBP7.56□□□□□ -1.2
CNOT1-205ENST00000563283 TXNDC2Q86VQ3 553 aa7.56□□□□□ -1.2
CNOT1-205ENST00000563283 TRPM4Q8TD43 1214 aa7.56□□□□□ -1.2
CNOT1-205ENST00000563283 JPH1Q9HDC5 661 aaPredicted RBP7.56□□□□□ -1.2
CNOT1-205ENST00000563283 IQGAP1P46940 1657 aa7.56□□□□□ -1.2
CNOT1-205ENST00000563283 TRPM2O94759 1503 aa7.56□□□□□ -1.2
CNOT1-205ENST00000563283 SCAF11Q99590 1463 aaKnown RBP7.55□□□□□ -1.2
CNOT1-205ENST00000563283 NPHP4O75161 1426 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-205ENST00000563283 XYLBO75191 536 aa7.55□□□□□ -1.2
CNOT1-205ENST00000563283 ATP2B4P23634 1241 aa7.55□□□□□ -1.2
CNOT1-205ENST00000563283 GPLD1P80108 840 aa7.55□□□□□ -1.2
CNOT1-205ENST00000563283 FAM26DQ5JW98 314 aa7.55□□□□□ -1.2
CNOT1-205ENST00000563283 RGL4Q8IZJ4 473 aa7.55□□□□□ -1.2
CNOT1-205ENST00000563283 C1orf115Q9H7X2 142 aa7.55□□□□□ -1.2
CNOT1-205ENST00000563283 KCNMB2Q9Y691 235 aa7.55□□□□□ -1.2
CNOT1-205ENST00000563283 FAM35AQ86V20 835 aa7.54□□□□□ -1.2
CNOT1-205ENST00000563283 CMTR1Q8N1G2 835 aaKnown RBP7.54□□□□□ -1.2
CNOT1-205ENST00000563283 NUDT8Q8WV74 236 aa7.54□□□□□ -1.2
CNOT1-205ENST00000563283 FRRS1LQ9P0K9 344 aa7.54□□□□□ -1.2
CNOT1-205ENST00000563283 XIRP1Q702N8 1843 aaKnown RBP7.53□□□□□ -1.2
CNOT1-205ENST00000563283 ZBTB42B2RXF5 422 aa7.53□□□□□ -1.2
CNOT1-205ENST00000563283 FAM229AH3BQW9 127 aa7.53□□□□□ -1.2
CNOT1-205ENST00000563283 PPP1R15AO75807 674 aaPredicted RBP7.53□□□□□ -1.2
CNOT1-205ENST00000563283 RGS9O75916 674 aaPredicted RBP7.53□□□□□ -1.2
CNOT1-205ENST00000563283 CPB1P15086 417 aa7.53□□□□□ -1.2
CNOT1-205ENST00000563283 ARID4AP29374 1257 aaPredicted RBP7.53□□□□□ -1.2
CNOT1-205ENST00000563283 AFF1P51825 1210 aaKnown RBP7.53□□□□□ -1.2
CNOT1-205ENST00000563283 NRLP54845 237 aa7.53□□□□□ -1.2
CNOT1-205ENST00000563283 TRIM28Q13263 835 aaKnown RBP7.53□□□□□ -1.2
CNOT1-205ENST00000563283 NAA30Q147X3 362 aaPredicted RBP7.53□□□□□ -1.2
CNOT1-205ENST00000563283 LPIN3Q9BQK8 851 aa7.53□□□□□ -1.2
CNOT1-205ENST00000563283 TLR7Q9NYK1 1049 aaKnown RBP7.53□□□□□ -1.2
CNOT1-205ENST00000563283 RIMS2Q9UQ26 1411 aa7.52□□□□□ -1.2
CNOT1-205ENST00000563283 NRXN3Q9Y4C0 1643 aa7.52□□□□□ -1.2
CNOT1-205ENST00000563283 ADAM23O75077 832 aa7.52□□□□□ -1.21
CNOT1-205ENST00000563283 APBA3O96018 575 aa7.52□□□□□ -1.21
CNOT1-205ENST00000563283 HOXD8P13378 290 aaPredicted RBP7.52□□□□□ -1.21
CNOT1-205ENST00000563283 TRIP4Q15650 581 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms