RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 RABL6Q3YEC7 729 aaPredicted RBP19.81■□□□□ 0.76
SF3B3-203ENST00000562874 LRRC24Q50LG9 513 aa19.81■□□□□ 0.76
SF3B3-203ENST00000562874 HDAC9Q9UKV0 1011 aa19.81■□□□□ 0.76
SF3B3-203ENST00000562874 IL1R1P14778 569 aa19.8■□□□□ 0.76
SF3B3-203ENST00000562874 GYG1P46976 350 aa19.8■□□□□ 0.76
SF3B3-203ENST00000562874 ZNF157P51786 506 aaPredicted RBP19.8■□□□□ 0.76
SF3B3-203ENST00000562874 BRPF1P55201 1214 aaPredicted RBP19.8■□□□□ 0.76
SF3B3-203ENST00000562874 NOGQ13253 232 aa19.8■□□□□ 0.76
SF3B3-203ENST00000562874 USP44Q9H0E7 712 aa19.79■□□□□ 0.76
SF3B3-203ENST00000562874 SLC10A3P09131 477 aa19.78■□□□□ 0.76
SF3B3-203ENST00000562874 RIPOR2Q9Y4F9 1068 aa19.78■□□□□ 0.76
SF3B3-203ENST00000562874 AK9Q5TCS8 1911 aa19.78■□□□□ 0.76
SF3B3-203ENST00000562874 AOX1Q06278 1338 aa19.77■□□□□ 0.76
SF3B3-203ENST00000562874 UBE4AQ14139 1066 aa19.77■□□□□ 0.76
SF3B3-203ENST00000562874 METTL24Q5JXM2 366 aa19.77■□□□□ 0.76
SF3B3-203ENST00000562874 RASAL3Q86YV0 1011 aa19.77■□□□□ 0.76
SF3B3-203ENST00000562874 ZBED3Q96IU2 234 aaPredicted RBP19.77■□□□□ 0.76
SF3B3-203ENST00000562874 NOB1Q9ULX3 412 aaKnown RBP19.77■□□□□ 0.76
SF3B3-203ENST00000562874 IQSEC3Q9UPP2 1182 aaPredicted RBP19.77■□□□□ 0.76
SF3B3-203ENST00000562874 SSC5DA1L4H1 1573 aa19.77■□□□□ 0.76
SF3B3-203ENST00000562874 MROH5Q6ZUA9 1318 aa19.76■□□□□ 0.75
SF3B3-203ENST00000562874 COL1A1P02452 1464 aaPredicted RBP19.76■□□□□ 0.75
SF3B3-203ENST00000562874 KIF23Q02241 960 aaPredicted RBP19.76■□□□□ 0.75
SF3B3-203ENST00000562874 PRKG1Q13976 671 aa19.76■□□□□ 0.75
SF3B3-203ENST00000562874 TTLL12Q14166 644 aaPredicted RBP19.76■□□□□ 0.75
SF3B3-203ENST00000562874 DLGAP5Q15398 846 aa19.76■□□□□ 0.75
SF3B3-203ENST00000562874 APOBEC3FQ8IUX4 373 aaKnown RBP19.76■□□□□ 0.75
SF3B3-203ENST00000562874 MYH2Q9UKX2 1941 aa19.75■□□□□ 0.75
SF3B3-203ENST00000562874 CLRN2A0PK11 232 aa19.75■□□□□ 0.75
SF3B3-203ENST00000562874 UBE2Q2LH0YL09 131 aa19.75■□□□□ 0.75
SF3B3-203ENST00000562874 CFAP100Q494V2 611 aa19.75■□□□□ 0.75
SF3B3-203ENST00000562874 FAM84BQ96KN1 310 aaPredicted RBP19.75■□□□□ 0.75
SF3B3-203ENST00000562874 FZD1Q9UP38 647 aa19.75■□□□□ 0.75
SF3B3-203ENST00000562874 HIBADHP31937 336 aaKnown RBP19.74■□□□□ 0.75
SF3B3-203ENST00000562874 MFSD14BQ5SR56 506 aa19.74■□□□□ 0.75
SF3B3-203ENST00000562874 VGLL2Q8N8G2 317 aa19.74■□□□□ 0.75
SF3B3-203ENST00000562874 TDRD7Q8NHU6 1098 aaKnown RBP19.74■□□□□ 0.75
SF3B3-203ENST00000562874 CCDC102AQ96A19 550 aa19.74■□□□□ 0.75
SF3B3-203ENST00000562874 FAM205AQ6ZU69 1335 aa19.73■□□□□ 0.75
SF3B3-203ENST00000562874 CT47B1P0C2W7 299 aaPredicted RBP19.72■□□□□ 0.75
SF3B3-203ENST00000562874 UBTFL1P0CB47 393 aaPredicted RBP19.72■□□□□ 0.75
SF3B3-203ENST00000562874 NF2P35240 595 aa19.72■□□□□ 0.75
SF3B3-203ENST00000562874 RFX5P48382 616 aaPredicted RBP19.72■□□□□ 0.75
SF3B3-203ENST00000562874 RBM5P52756 815 aaKnown RBP eCLIP19.72■□□□□ 0.75
SF3B3-203ENST00000562874 FKBP1AP62942 108 aaKnown RBP19.72■□□□□ 0.75
SF3B3-203ENST00000562874 FKBP1BP68106 108 aa19.72■□□□□ 0.75
SF3B3-203ENST00000562874 CHAF1AQ13111 956 aaPredicted RBP19.72■□□□□ 0.75
SF3B3-203ENST00000562874 VEZTQ9HBM0 779 aa19.72■□□□□ 0.75
SF3B3-203ENST00000562874 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.72■□□□□ 0.75
SF3B3-203ENST00000562874 SPDYE2BA6NHP3 402 aa19.71■□□□□ 0.75
SF3B3-203ENST00000562874 CA12O43570 354 aa19.71■□□□□ 0.75
SF3B3-203ENST00000562874 PDE8BO95263 885 aa19.71■□□□□ 0.75
SF3B3-203ENST00000562874 SPDYE6P0CI01 402 aa19.71■□□□□ 0.75
SF3B3-203ENST00000562874 MMP14P50281 582 aa19.71■□□□□ 0.75
SF3B3-203ENST00000562874 RARSP54136 660 aaKnown RBP19.71■□□□□ 0.75
SF3B3-203ENST00000562874 MKRN3Q13064 507 aaKnown RBP19.71■□□□□ 0.75
SF3B3-203ENST00000562874 GRIK5Q16478 980 aa19.71■□□□□ 0.75
SF3B3-203ENST00000562874 VPS37DQ86XT2 251 aa19.71■□□□□ 0.75
SF3B3-203ENST00000562874 PRMT6Q96LA8 375 aaPredicted RBP19.71■□□□□ 0.75
SF3B3-203ENST00000562874 API5Q9BZZ5 524 aaKnown RBP19.71■□□□□ 0.75
SF3B3-203ENST00000562874 SIL1Q9H173 461 aa19.71■□□□□ 0.75
SF3B3-203ENST00000562874 TTF2Q9UNY4 1162 aaKnown RBP19.71■□□□□ 0.75
SF3B3-203ENST00000562874 DOCK2Q92608 1830 aa19.7■□□□□ 0.74
SF3B3-203ENST00000562874 MIER1Q8N108 512 aa19.7■□□□□ 0.74
SF3B3-203ENST00000562874 MTMR14Q8NCE2 650 aa19.7■□□□□ 0.74
SF3B3-203ENST00000562874 MEIS3Q99687 375 aa19.7■□□□□ 0.74
SF3B3-203ENST00000562874 TNNQ9UQP3 1299 aa19.7■□□□□ 0.74
SF3B3-203ENST00000562874 LRRFIP2Q9Y608 721 aaKnown RBP19.7■□□□□ 0.74
SF3B3-203ENST00000562874 KIF16BQ96L93 1317 aa19.7■□□□□ 0.74
SF3B3-203ENST00000562874 EYA2O00167 538 aa19.69■□□□□ 0.74
SF3B3-203ENST00000562874 PTPN12Q05209 780 aaKnown RBP19.69■□□□□ 0.74
SF3B3-203ENST00000562874 CSRNP1Q96S65 589 aa19.69■□□□□ 0.74
SF3B3-203ENST00000562874 DEFB129Q9H1M3 183 aa19.69■□□□□ 0.74
SF3B3-203ENST00000562874 ANGEL1Q9UNK9 670 aaKnown RBP19.69■□□□□ 0.74
SF3B3-203ENST00000562874 MYO1BO43795 1136 aa19.68■□□□□ 0.74
SF3B3-203ENST00000562874 FRAT2O75474 233 aaPredicted RBP19.68■□□□□ 0.74
SF3B3-203ENST00000562874 TRPA1O75762 1119 aa19.68■□□□□ 0.74
SF3B3-203ENST00000562874 BCAMP50895 628 aa19.68■□□□□ 0.74
SF3B3-203ENST00000562874 PUM3Q15397 648 aaKnown RBP19.68■□□□□ 0.74
SF3B3-203ENST00000562874 FBXO33Q7Z6M2 555 aa19.68■□□□□ 0.74
SF3B3-203ENST00000562874 ABHD8Q96I13 439 aa19.68■□□□□ 0.74
SF3B3-203ENST00000562874 MYO5AQ9Y4I1 1855 aaKnown RBP19.67■□□□□ 0.74
SF3B3-203ENST00000562874 FGFR2P21802 821 aa19.67■□□□□ 0.74
SF3B3-203ENST00000562874 CAVIN4Q5BKX8 364 aa19.67■□□□□ 0.74
SF3B3-203ENST00000562874 ATG9AQ7Z3C6 839 aa19.67■□□□□ 0.74
SF3B3-203ENST00000562874 ARMC9Q7Z3E5 817 aa19.67■□□□□ 0.74
SF3B3-203ENST00000562874 RNF186Q9NXI6 227 aa19.67■□□□□ 0.74
SF3B3-203ENST00000562874 PA2G4Q9UQ80 394 aaKnown RBP19.67■□□□□ 0.74
SF3B3-203ENST00000562874 HNRNPUQ00839 825 aaKnown RBP eCLIP19.66■□□□□ 0.74
SF3B3-203ENST00000562874 DIEXFQ68CQ4 756 aaKnown RBP19.66■□□□□ 0.74
SF3B3-203ENST00000562874 TDRD3Q9H7E2 651 aaKnown RBP19.66■□□□□ 0.74
SF3B3-203ENST00000562874 BCAR3O75815 825 aa19.65■□□□□ 0.74
SF3B3-203ENST00000562874 IFIT1P09914 478 aaKnown RBP19.65■□□□□ 0.74
SF3B3-203ENST00000562874 CRKP46108 304 aa19.65■□□□□ 0.74
SF3B3-203ENST00000562874 SPDYE2Q495Y8 402 aa19.65■□□□□ 0.74
SF3B3-203ENST00000562874 NBPF12Q5TAG4 269 aaPredicted RBP19.65■□□□□ 0.74
SF3B3-203ENST00000562874 CDAN1Q8IWY9 1227 aa19.65■□□□□ 0.74
SF3B3-203ENST00000562874 SAGE1Q9NXZ1 904 aa19.65■□□□□ 0.74
SF3B3-203ENST00000562874 SLC5A1P13866 664 aa19.64■□□□□ 0.73
SF3B3-203ENST00000562874 FRAT1Q92837 279 aaPredicted RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms